MK5 Microarray Data

Rank	Gene	description	Value Type	Network Comparison Type	Interaction Map	Filtered	red	green	network_comparison

Results: HTML CSV LaTeX

Showing element 75 to 124 of 3228 in total

Value Type	Measured
Network Comparison Type	Divided
Interaction Map	High confidence
Filtered	1

Rank	description	red	green	network_comparison	
75	nadh-ubiquinone oxidoreductase 18 kda subunit, mitochondrial precursor (ec 1.6.5.3) (ec 1.6.99.3) (complex i-18 kda) (ci-18 kda) (complex i- aqdq) (ci-aqdq). [source:swissprot;acc:o43181]	1920.75	2907.43	1.5137	
76	serine/threonine protein phosphatase 2a, 65 kda regulatory subunit a, beta isoform (pp2a, subunit a, pr65-beta isoform) (pp2a, subunit a, r1-beta isoform). [source:swissprot;acc:p30154]	4599.26	3058.57	1.50373	
77	serine/threonine protein phosphatase 2a, 65 kda regulatory subunit a, alpha isoform (pp2a, subunit a, pr65-alpha isoform) (pp2a, subunit a, r1-alpha isoform) (medium tumor antigen-associated 61 kda protein). [source:swissprot;acc:p30153]	4612.39	3093.6	1.49095	
78	cyclic-amp-dependent transcription factor atf-3 (activating transcription factor 3). [source:swissprot;acc:p18847]	4800.81	7132.71	1.48573	
79	protein cgi-126 (protein hspc155). [source:swissprot;acc:q9y3c8]	3074.57	4567.51	1.48558	
80	nucleolysin tia-1 (rna-binding protein tia-1) (p40-tia-1) [contains: p15-tia-1]. [source:swissprot;acc:p31483]	4133.47	5945.32	1.43834	
81	nucleolysin tiar (tia-1 related protein). [source:swissprot;acc:q01085]	4136.36	5943.56	1.43691	
82	small nuclear ribonucleoprotein sm d1 (snrnp core protein d1) (sm-d1) (sm-d autoantigen). [source:swissprot;acc:p13641]	4172.91	5954.48	1.42694	
83	proto-oncogene protein c-fos (cellular oncogene fos) (g0/g1 switch regulatory protein 7). [source:swissprot;acc:p01100]	4932.27	7033.29	1.42597	
84	jun dimerization protein. [source:refseq;acc:nm_130469]	4932.27	7033.29	1.42597	
85	fos-related antigen 2. [source:swissprot;acc:p15408]	4941.95	7037.11	1.42395	
86	protein fosb (g0/g1 switch regulatory protein 3). [source:swissprot;acc:p53539]	4942.49	7037.32	1.42384	
87	fos-related antigen 1 (fra-1). [source:swissprot;acc:p15407]	4944.3	7038.04	1.42347	
88	potassium voltage-gated channel, shal-related subfamily, member 2; voltage-sensitive potassium channel; voltage-gated potassium channel kv4.2. [source:refseq;acc:nm_012281]	2411.93	1695.45	1.42259	
89	cystathionine gamma-lyase (ec 4.4.1.1) (gamma-cystathionase). [source:swissprot;acc:p32929]	2414.22	1698.12	1.4217	
90	potassium voltage-gated channel, shal-related subfamily, member 3 isoform 1; sha1-related potassium channel kv4.3; voltage-gated k+ channel; potassium ionic channel kv4.3; voltage-gated potassium channel kv4.3. [source:refseq;acc:nm_004980]	2414.77	1698.75	1.4215	
91	potassium voltage-gated channel, shal-related subfamily, member 1; shal-type potassium channel; voltage-gated potassium channel kv4.1. [source:refseq;acc:nm_004979]	2416.53	1700.8	1.42082	
92	dj820b18.1 (similar to nuclear cap binding protein) (fragment). [source:sptrembl;acc:q8wwk2]	4117.67	5801.04	1.40882	
93	formin binding protein 3; fas-ligand associated factor 1; huntingtin-interacting protein a; ny-ren-6 antigen. [source:refseq;acc:nm_017892]	4245.52	5942.75	1.39977	
94	huntingtin-interacting protein hypa/fbp11 (fragment). [source:sptrembl;acc:o75404]	4247.86	5941.88	1.39879	
95	son protein (son3) (negative regulatory element-binding protein) (nre- binding protein) (dbp-5) (bax antagonist selected in saccharomyces 1) (bass1) (protein c21orf50). [source:swissprot;acc:p18583]	2397.19	3343.62	1.39481	
96	lag1 longevity assurance homolog 2 isoform 1; l3 pigment; tumor metastasis-suppressor. [source:refseq;acc:nm_022075]	4110.14	5694.99	1.3856	
97	amyloid beta a4 precursor protein-binding family a member 1 (neuron- specific x11 protein) (neuronal munc18-1-interacting protein 1) (mint-1) (adapter protein x11alpha). [source:swissprot;acc:q02410]	2820.51	3897.1	1.3817	
98	presenilin 2 (ps-2) (stm-2) (e5-1) (ad3lp) (ad5). [source:swissprot;acc:p49810]	2353.63	3225.65	1.3705	
99	s-phase kinase-associated protein 1a (cyclin a/cdk2-associated protein p19) (p19a) (p19skp1) (rna polymerase ii elongation factor-like protein) (organ of corti protein 2) (ocp-ii protein) (ocp-2) (transcription elongation factor b) (siii). [source:swissprot;acc:p34991]	2353.63	3225.65	1.3705	
100	f-box protein fbw7 isoform 2; archipelago, drosophila, homolog of; f-box protein fbw7; f-box protein sel-10; homolog of c elegans sel-10. [source:refseq;acc:nm_018315]	2353.63	3225.65	1.3705	
101	cullin homolog 2 (cul-2). [source:swissprot;acc:q13617]	2353.63	3225.65	1.3705	
102	presenilin 1 (ps-1) (s182 protein). [source:swissprot;acc:p49768]	2353.63	3225.65	1.3705	
103	cullin homolog 1 (cul-1). [source:swissprot;acc:q13616]	2353.63	3225.65	1.3705	
104	musashi 2 isoform a. [source:refseq;acc:nm_138962]	4241.57	5810.79	1.36996	
105	musashi 1. [source:refseq;acc:nm_002442]	4241.57	5810.79	1.36996	
106	nuclear protein ukp68. [source:refseq;acc:nm_024824]	4241.57	5810.79	1.36996	
107	20 kda nuclear cap binding protein (ncbp 20 kda subunit) (cbp20) (ncbp interacting protein 1) (nip1). [source:swissprot;acc:p52298]	4266.04	5843.51	1.36977	
108	filamin b, beta (actin binding protein 278); beta filamin; filamin 1 (actin-binding protein-280)-like; filamin b, beta (actin-binding protein-278); filamin b, beta. [source:refseq;acc:nm_001457]	4366.44	5899.76	1.35116	
109	rev1-like; rev1 protein; rev1 (yeast homolog)- like. [source:refseq;acc:nm_016316]	4366.44	5899.76	1.35116	
110	protein arginine n-methyltransferase 1 (ec 2.1.1.-) (interferon receptor 1-bound protein 4). [source:swissprot;acc:q99873]	4366.44	5899.76	1.35116	
111	protein arginine n-methyltransferase 4 (ec 2.1.1.-). [source:swissprot;acc:q9nr22]	4366.44	5899.76	1.35116	
112	u1 small nuclear ribonucleoprotein 70 kda (u1 snrnp 70 kda) (snrnp70) (u1-70k). [source:swissprot;acc:p08621]	4366.44	5899.76	1.35116	
113	filamin a (alpha-filamin) (filamin 1) (endothelial actin-binding protein) (abp-280) (nonmuscle filamin). [source:swissprot;acc:p21333]	4366.44	5899.76	1.35116	
114	huntingtin interacting protein c. [source:refseq;acc:nm_012272]	4300.47	5807.72	1.35048	
115	28s ribosomal protein s17, mitochondrial precursor (mrp-s17) (hspc011). [source:swissprot;acc:q9y2r5]	21185	28492	1.34491	
116	pantothenate kinase 1 (ec 2.7.1.33) (pantothenic acid kinase 1) (hpank1) (hpank). [source:swissprot;acc:q8te04]	21185	28492	1.34491	
117	pantothenate kinase 2, mitochondrial precursor (ec 2.7.1.33) (pantothenic acid kinase 2) (hpank2). [source:swissprot;acc:q9bz23]	21185	28492	1.34491	
118	pantothenate kinase 3 (ec 2.7.1.33) (pantothenic acid kinase 3) (hpank3). [source:swissprot;acc:q9h999]	21185	28492	1.34491	
119	mitochondrial solute carrier protein. [source:refseq;acc:nm_145305]	21185	28492	1.34491	
120	high-mobility group 20b; sox-like transcriptional factor; swi/snf-related matrix-associated actin-dependent regulator of chromatin subfamily e, member 1-related. [source:refseq;acc:nm_006339]	5136.78	6895.98	1.34247	
121	transcription factor jun-b. [source:swissprot;acc:p17275]	5579.18	7488.4	1.3422	
122	high-mobility group 20a. [source:refseq;acc:nm_018200]	5140.14	6893.53	1.34112	
123	cysteine endopeptidase aut-like 2 isoform a; autophagy-related cysteine endopeptidase 2; autophagin 2. [source:refseq;acc:nm_052936]	24260.3	18172.1	1.33503	
124	microtubule-associated proteins 1a/1b light chain 3b (map1a/map1b lc3 b) (map1a/1b light chain 3 b). [source:swissprot;acc:q9gzq8]	24255.7	18168.9	1.33501	

Legend:
- Rank is the rank after comparing the two networks
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.