MK5 Microarray Data

Rank	Gene	Hugo	description	Value Type	Network Comparison Type	Interaction Map	Filtered	red	green	network_comparison

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Showing element 2813 to 2862 of 3228 in total

Value Type	Ranked
Network Comparison Type	Divided
Interaction Map	High confidence
Filtered	1
red	0.00001
green	0.00001
network_comparison	1

Rank	Hugo	description	
2813	HDAC3	histone deacetylase 3 (hd3) (rpd3-2). [source:swissprot;acc:o15379]	
2814	SPSB1	spry domain-containing socs box protein ssb-1. [source:refseq;acc:nm_025106]	
2815	NMUR1	g protein-coupled receptor 66. [source:refseq;acc:nm_006056]	
2816	TIGD1	tigger transposable element derived 1; jerky (mouse) homolog-like. [source:refseq;acc:nm_145702]	
2817	TBCA	tubulin-specific chaperone a (tubulin-folding cofactor a) (cfa) (tcp1-chaperonin cofactor a). [source:swissprot;acc:o75347]	
2818	UGT2B7	udp-glucuronosyltransferase 2b7 precursor, microsomal (ec 2.4.1.17) (udpgt) (3,4-catechol estrogen specific) (udpgth-2). [source:swissprot;acc:p16662]	
2819		udp-glucuronosyltransferase 2b11 precursor, microsomal (ec 2.4.1.17) (udpgt). [source:swissprot;acc:o75310]	
2820		peregrin (bromodomain and phd finger-containing protein 1) (br140 protein). [source:swissprot;acc:p55201]	
2821	ATP6V0E2	vacuolar proton-atpase subunit. [source:sptrembl;acc:q8nhe4]	
2822	SLC30A1	zinc transporter 1 (znt-1). [source:swissprot;acc:q9y6m5]	
2823	NFRKB	nuclear factor related to kappa b binding protein. [source:refseq;acc:nm_006165]	
2824	HSPB2	heat-shock protein, beta-2 (hspb2) (dmpk-binding protein) (mkbp). [source:swissprot;acc:q16082]	
2825		mitochondrial 28s ribosomal protein s6 (mrp-s6). [source:swissprot;acc:p82932]	
2826		suppressor of actin 1. [source:refseq;acc:nm_014016]	
2827	GPS1	cop9 signalosome complex subunit 1 (g protein pathway suppressor 1) (gps1 protein) (mfh protein). [source:swissprot;acc:q13098]	
2828		ubiquitin-conjugating enzyme e2-18 kda ubch7 (ec 6.3.2.19) (ubiquitin- protein ligase) (ubiquitin carrier protein) (ubcm4) (e2-f1) (l-ubc). [source:swissprot;acc:p51966]	
2829	ASPSCR1	alveolar soft part sarcoma chromosome region, candidate 1; aspl protein; renal cell carcinoma gene on chromosome 17; renal cell carcinoma, papillary, 17 gene; aspscr1/tfe3 fusion gene, included. [source:refseq;acc:nm_024083]	
2830	CSNK1G1	casein kinase i, gamma 1 isoform (ec 2.7.1.-) (cki-gamma 1). [source:swissprot;acc:q9hcp0]	
2831	FEN1	flap endonuclease-1 (ec 3.-.-.-) (maturation factor 1) (mf1). [source:swissprot;acc:p39748]	
2832	SEMA6B	semaphorin 6b precursor (semaphorin z) (sema z). [source:swissprot;acc:q9h3t3]	
2833	TPM4	tropomyosin alpha 4 chain (tropomyosin 4) (tm30p1). [source:swissprot;acc:p07226]	
2834	ATP5L	atp synthase g chain, mitochondrial (ec 3.6.3.14) (atpase subunit g). [source:swissprot;acc:o75964]	
2835	UGT1A9	udp-glucuronosyltransferase 1-6 precursor, microsomal (ec 2.4.1.17) (udp-glucuronosyltransferase 1a6) (udpgt) (ugt1*6) (ugt1-06) (ugt1.6) (ugt-1f) (ugt1f) (phenol-metabolizing udp-glucuronosyltransferase). [source:swissprot;acc:p19224]	
2836	COG1	conserved oligomeric golgi complex component 1. [source:swissprot;acc:q8wtw3]	
2837	TK2	thymidine kinase 2, mitochondrial precursor (ec 2.7.1.21) (mt-tk). [source:swissprot;acc:o00142]	
2838	DCHS1	protocadherin 16 precursor (cadherin 19) (cadherin fibroblast 1). [source:swissprot;acc:q96jq0]	
2839	TAF10	transcription initiation factor tfiid 30 kda subunit (tafii-30) (tafii30). [source:swissprot;acc:q12962]	
2840	CUL5	vasopressin-activated calcium-mobilizing receptor (vacm-1) (cullin homolog 5) (cul-5). [source:swissprot;acc:q93034]	
2841	COPS2	cop9 signalosome complex subunit 2 (signalosome subunit 2) (sgn2) (thyroid receptor interacting protein 15) (trip15). [source:swissprot;acc:q15647]	
2842	NOLC1	nucleolar phosphoprotein p130 (nucleolar 130 kda protein) (140 kda nucleolar phosphoprotein) (nopp140) (nucleolar and coiled-body phosphoprotein 1). [source:swissprot;acc:q14978]	
2843	SENP8	sentrin-specific protease 8 (ec 3.4.22.-) (sentrin/sumo-specific protease senp8) (cysteine protease fksg8). [source:swissprot;acc:q96ld8]	
2844	FBN1	fibrillin 1 precursor. [source:swissprot;acc:p35555]	
2845	PACSIN3	protein kinase c and casein kinase substrate in neurons protein 3 (sh3 domain-containing protein 6511) (endophilin i). [source:swissprot;acc:q9uks6]	
2846	C10orf118	ctcl tumor antigen l14-2. [source:refseq;acc:nm_018017]	
2847	DACH1	dachshund homolog isoform a. [source:refseq;acc:nm_080759]	
2848	GTF2A1	transcription initiation factor iia alpha and beta chains (tfiia p35 and p19 subunits) (tfiia-42) (tfiial). [source:swissprot;acc:p52655]	
2849	SNAPC3	snrna activating protein complex 50 kda subunit (snapc 50 kda subunit) (proximal sequence element-binding transcription factor beta subunit) (pse-binding factor beta subunit) (ptf beta subunit). [source:swissprot;acc:q92966]	
2850	CDK5	cell division protein kinase 5 (ec 2.7.1.-) (tau protein kinase ii catalytic subunit) (tpkii catalytic subunit) (serine/threonine protein kinase pssalre). [source:swissprot;acc:q00535]	
2851	ORC5L	origin recognition complex subunit 5. [source:swissprot;acc:o43913]	
2852	HIST1H2AA	histone h2a; h2a histone family, member r. [source:refseq;acc:nm_170745]	
2853	TIGD6	tigger transposable element derived 6. [source:refseq;acc:nm_030953]	
2854	NARG1	transcriptional coactivator tubedown-100 isoform 1; putative n-acetyltransferase; gastric cancer antigen ga19. [source:refseq;acc:nm_057175]	
2855	HPGD	15-hydroxyprostaglandin dehydrogenase [nad(+)] (ec 1.1.1.141) (pgdh). [source:swissprot;acc:p15428]	
2856	HMGB2	high mobility group protein 2 (hmg-2). [source:swissprot;acc:p26583]	
2857	PRKCD	protein kinase c, delta type (ec 2.7.1.-) (npkc-delta). [source:swissprot;acc:q05655]	
2858	RYK	tyrosine-protein kinase ryk precursor (ec 2.7.1.112). [source:swissprot;acc:p34925]	
2859	NKX6-1	homeobox protein nkx-6.1. [source:swissprot;acc:p78426]	
2860		importin 9. [source:refseq;acc:nm_018085]	
2861	GNPDA2	glucosamine-6-phosphate isomerase. [source:refseq;acc:nm_138335]	
2862	SDC3	syndecan-3 (synd3). [source:swissprot;acc:o75056]	

Legend:
- Rank is the rank after comparing the two networks
- Hugo is the HGNC identifier if it exists
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.