Scientific
MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis
These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.
Proteome Analysis

Below the proteome analysis is presented. The analysis methods are presented in the paper Propagating Differential Gene Expression in Protein Interaction Networks. If you are interested in the most reliable results choose the
value_type as 'ranked' since this provides a very robust analysis method.
intercation map as 'high confidence'
network_comparison type as 'Divided' since this leads to a natural grouping of similar proteins
filtered as 'true' since this will only use the microarray measurements that have a sufficiently large confidence level.
Navigation/Query Panel:
Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Rank Gene Hugo description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX
Showing element 527 to 576 of 3228 in total
Value Type: Ranked
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1

\def\wcA{0.14285714285714\textwidth}
\def\wcB{0.14285714285714\textwidth}
\def\wcC{0.14285714285714\textwidth}
\def\wcD{0.14285714285714\textwidth}
\def\wcE{0.14285714285714\textwidth}
\def\wcF{0.14285714285714\textwidth}
\begin{longtable}{|c|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
Hugo\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
527\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
DDX31\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
dead (asp-glu-ala-asp) box polypeptide 31 isoform 1; dead/dexh helicase ddx31. [source:refseq;acc:nm\_022779]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
248.56\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
232.579\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.06871\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
528\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
YME1L1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
yme1-like 1 isoform 3; atp-dependent metalloprotease ftsh1 homolog. [source:refseq;acc:nm\_014263]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
222.146\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
237.393\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.06864\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
529\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
DDX18\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
atp-dependent rna helicase ddx18 (dead-box protein 18) (myc-regulated dead-box protein) (mrdb). [source:swissprot;acc:q9nvp1]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
251.653\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
235.506\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.06856\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
530\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
LSM6\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
u6 snrna-associated sm-like protein lsm6 (sm protein f). [source:swissprot;acc:q9y4y8]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
227.483\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
212.994\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.06803\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
531\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
PRPF19\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
nuclear matrix protein nmp200 related to splicing factor prp19. [source:refseq;acc:nm\_014502]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
223.356\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
209.149\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.06793\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
532\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ZNF622\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
zinc finger-like protein 9. [source:refseq;acc:nm\_033414]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
250.942\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
235.004\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.06782\vspace{3pt}}}\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
533\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
SLC45A2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
membrane-associated transporter protein (aim-1 protein) (melanoma antigen aim1). [source:swissprot;acc:q9umx9]\vspace{3pt}}&&&\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
534\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
guanine nucleotide-binding protein-like 1 (gtp-binding protein hsr1). [source:swissprot;acc:p36915]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
535\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
POLR2H\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
dna-directed rna polymerases i, ii, and iii 17.1 kda polypeptide (ec 2.7.7.6) (rpb17) (rpb8) (rpabc3). [source:swissprot;acc:p52434]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
236.662\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
252.708\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.0678\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
536\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
SSB\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
lupus la protein (sjogren syndrome type b antigen) (ss-b) (la ribonucleoprotein) (la autoantigen). [source:swissprot;acc:p05455]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
242.531\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
227.136\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.06778\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
537\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
DHX15\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
putative pre-mrna splicing factor rna helicase (deah box protein 15) (atp-dependent rna helicase #46). [source:swissprot;acc:o43143]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
229.803\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
215.301\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.06736\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
538\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
POLR2L\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
dna-directed rna polymerase ii 7.6 kda polypeptide (ec 2.7.7.6) (rpb10) (rpb7.6) (rpabc5). [source:swissprot;acc:p52436]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
237.627\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
253.604\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.06724\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
539\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
MEMO1P\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
protein cgi-27 (c21orf19-like protein). [source:swissprot;acc:q9y316]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
236.964\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
252.86\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.06708\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
540\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
SEPHS2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
selenide,water dikinase 2 (ec 2.7.9.3) (selenophosphate synthetase 2) (selenium donor protein 2). [source:swissprot;acc:q99611]\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
222.156\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
208.201\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.06703\vspace{3pt}}}\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
541\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
MICAL2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
flavoprotein oxidoreductase mical2. [source:refseq;acc:nm\_014632]\vspace{3pt}}&&&\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
542\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
INPP4B\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
inositol polyphosphate-4-phosphatase, type ii, 105kd; inositol polyphosphate 4-phosphatase ii; 4-phosphatase ii. [source:refseq;acc:nm\_003866]\vspace{3pt}}&&&\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
543\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
SEPHS1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
selenide,water dikinase 1 (ec 2.7.9.3) (selenophosphate synthetase 1) (selenium donor protein 1). [source:swissprot;acc:p49903]\vspace{3pt}}&&&\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
544\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
INPP4A\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
inositol polyphosphate-4-phosphatase, type 1 isoform b; inositol polyphosphate-4-phosphatase, type i, 107kd; 4-phosphatase i; inositol polyphosphate-4-phosphatase i. [source:refseq;acc:nm\_001566]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
545\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
EIF6\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
eukaryotic translation initiation factor 6 (eif-6) (b4 integrin interactor) (cab) (p27(bbp)) (b(2)gcn homolog). [source:swissprot;acc:p56537]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
248.866\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
233.287\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.06678\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
546\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
WAS\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
wiskott-aldrich syndrome protein (wasp). [source:swissprot;acc:p42768]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
207.222\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
194.262\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.06671\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
547\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
CRK\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
proto-oncogene c-crk (p38) (adapter molecule crk). [source:swissprot;acc:p46108]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
207.26\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
194.346\vspace{3pt}}}&\multirow{9}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.06645\vspace{3pt}}}\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
548\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ABL2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
tyrosine-protein kinase abl2 (ec 2.7.1.112) (tyrosine kinase arg). [source:swissprot;acc:p42684]\vspace{3pt}}&&&\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
549\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
proto-oncogene tyrosine-protein kinase src (ec 2.7.1.112) (p60-src) (c-src). [source:swissprot;acc:p12931]\vspace{3pt}}&&&\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
550\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
HCK\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
tyrosine-protein kinase hck (ec 2.7.1.112) (p59-hck/p60-hck) (hemopoietic cell kinase). [source:swissprot;acc:p08631]\vspace{3pt}}&&&\\\cline{1-5}
\parbox{\wcA}{\vspace{3pt}\noindent
551\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
GRAP2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
grb2-related adaptor protein 2 (gads protein) (growth factor receptor binding protein) (grblg) (grf40 adaptor protein) (grf-40) (grb-2-like protein) (grb2l) (grbx) (p38) (hematopoietic cell-associated adaptor protein grpl) (adapter protein grid) (sh3-sh2-sh3 adaptor mona). [source:swissprot;acc:o75791]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
207.261\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
194.347\vspace{3pt}}&\\\cline{1-5}
\parbox{\wcA}{\vspace{3pt}\noindent
552\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
CRKL\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
crk-like protein. [source:swissprot;acc:p46109]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
207.26\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
194.346\vspace{3pt}}}&\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
553\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ABL1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
proto-oncogene tyrosine-protein kinase abl1 (ec 2.7.1.112) (p150) (c-abl). [source:swissprot;acc:p00519]\vspace{3pt}}&&&\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
554\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
FYN\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
proto-oncogene tyrosine-protein kinase fyn (ec 2.7.1.112) (p59-fyn) (syn) (slk). [source:swissprot;acc:p06241]\vspace{3pt}}&&&\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
555\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
FGR\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
proto-oncogene tyrosine-protein kinase fgr (ec 2.7.1.112) (p55-fgr) (c-fgr). [source:swissprot;acc:p09769]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
556\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
CUTL1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
ccaat displacement protein (cdp) (cut-like 1). [source:swissprot;acc:p39880]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
207.27\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
194.368\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.06638\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
557\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
CUTL2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
homeobox protein cux-2 (cut-like 2) (fragment). [source:swissprot;acc:o14529]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
207.272\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
194.371\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.06637\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
558\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
ubiquitin activating enzyme e1-like protein. [source:refseq;acc:nm\_006395]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
135.087\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
144.041\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.06628\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
559\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
WASL\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
neural wiskott-aldrich syndrome protein (n-wasp). [source:swissprot;acc:o00401]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
207.309\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
194.452\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.06612\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
560\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
SOS1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
son of sevenless protein homolog 1 (sos-1). [source:swissprot;acc:q07889]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
205.74\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
193.021\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.06589\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
561\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
SOS2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
son of sevenless protein homolog 2 (sos-2). [source:swissprot;acc:q07890]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
205.89\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
193.183\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.06578\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
562\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
GULP1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
ptb domain adaptor protein ced-6; engulfment adapter protein. [source:refseq;acc:nm\_016315]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
220.744\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
207.121\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.06577\vspace{3pt}}}\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
563\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
CAPS\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
calcyphosine. [source:swissprot;acc:q13938]\vspace{3pt}}&&&\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
564\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
CRNKL1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
crooked neck-like protein 1 (crooked neck homolog) (hcrn) (cgi-201) (mstp021). [source:swissprot;acc:q9bzj0]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
565\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ZNF547\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
sedlin. [source:swissprot;acc:o14582]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
129.219\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
121.261\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.06563\vspace{3pt}}}\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
566\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
synbindin (trs23 homolog) (hematopoietic stem/progenitor cell protein 172) (hspc172) (ptd009) (cgi-104). [source:swissprot;acc:q9y296]\vspace{3pt}}&&&\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
567\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
TRAPPC3\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
bet3 homolog. [source:swissprot;acc:o43617]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
568\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
putative pre-mrna splicing factor rna helicase (atp-dependent rna helicase #3) (deah-box protein 16). [source:swissprot;acc:o60231]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
226.3\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
212.38\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.06554\vspace{3pt}}}\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
569\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
GPKOW\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
t54 protein. [source:swissprot;acc:q92917]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
570\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
SFRS11\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
splicing factor arginine/serine-rich 11 (arginine-rich 54 kda nuclear protein) (p54). [source:swissprot;acc:q05519]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
229.709\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
215.631\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.06529\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
571\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
MDH2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
malate dehydrogenase, mitochondrial precursor (ec 1.1.1.37). [source:swissprot;acc:p40926]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
238.529\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
254.099\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.06528\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
572\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
cbf1 interacting corepressor. [source:refseq;acc:nm\_004882]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
227.86\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
213.945\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.06504\vspace{3pt}}}\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
573\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
GPATCH1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
evolutionarily conserved g-patch domain containing. [source:refseq;acc:nm\_018025]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
574\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
MOBKL3\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
preimplantation protein 3; likely ortholog of preimplantation protein 3. [source:refseq;acc:nm\_015387]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
221.807\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
208.264\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.06503\vspace{3pt}}}\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
575\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
DNAJB11\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
dnaj homolog subfamily b member 11 precursor (er-associated dnaj protein 3) (erj3) (er-associated hsp40 co-chaperone) (hdj9) (pwp1- interacting protein 4). [source:swissprot;acc:q9ubs4]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
576\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
dj408b20.3 (novel protein similar to 60s acidic ribosomal protein p2 (rplp2)). [source:sptrembl;acc:q9h5a9]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
235.18\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
250.419\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.0648\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Hugo is the HGNC identifier if it exists

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/