Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

Proteome Analysis

Below the proteome analysis is presented. The analysis methods are presented in the paper Propagating Differential Gene Expression in Protein Interaction Networks. If you are interested in the most reliable results choose the

  • value_type as 'ranked' since this provides a very robust analysis method.
  • intercation map as 'high confidence'
  • network_comparison type as 'Divided' since this leads to a natural grouping of similar proteins
  • filtered as 'true' since this will only use the microarray measurements that have a sufficiently large confidence level.

  • Navigation/Query Panel:
    Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
    Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
    Results: HTML CSV LaTeX Showing element 51 to 100 of 3228 in total
    Value Type: Ranked
    Network Comparison Type: Divided
    Interaction Map: High confidence
    Filtered: 1
    \def\wcA{0.16666666666667\textwidth} \def\wcB{0.16666666666667\textwidth} \def\wcC{0.16666666666667\textwidth} \def\wcD{0.16666666666667\textwidth} \def\wcE{0.16666666666667\textwidth} \begin{longtable}{|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent 51\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent spermatogenesis associated 6. [source:refseq;acc:nm\_019073]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 133\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 105\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.26667\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 52\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent amp deaminase 2 (ec 3.5.4.6) (amp deaminase isoform l). [source:swissprot;acc:q01433]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 53\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent transcription factor jun-b. [source:swissprot;acc:p17275]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 201.144\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 158.868\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.26611\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 54\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent transcription factor jun-d. [source:swissprot;acc:p17535]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 200.941\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 158.941\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.26425\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 55\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent protein kinase, interferon-inducible double stranded rna dependent activator; protein activator of the interferon-induced protein kinase. [source:refseq;acc:nm\_003690]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 320.927\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 254.434\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.26134\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 56\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-7 subunit. [source:swissprot;acc:o60262]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 266.856\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 336.233\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.25998\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 57\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-12 subunit. [source:swissprot;acc:q9ubi6]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 58\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-4 subunit. [source:swissprot;acc:p50150]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 266.863\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 336.191\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.25979\vspace{3pt}}\\\cline{1-2}\cline{4-5} \parbox{\wcA}{\vspace{3pt}\noindent 59\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-3 subunit. [source:swissprot;acc:p29798]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 336.19\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.25978\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 60\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-8 subunit (gamma-9). [source:swissprot;acc:q9uk08]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 266.864\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 336.184\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.25976\vspace{3pt}}\\\cline{1-2}\cline{4-5} \parbox{\wcA}{\vspace{3pt}\noindent 61\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-5 subunit. [source:swissprot;acc:p30670]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 336.182\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.25975\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 62\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-10 subunit. [source:swissprot;acc:p50151]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 266.865\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 336.181\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.25974\vspace{3pt}}\\\cline{1-2}\cline{4-5} \parbox{\wcA}{\vspace{3pt}\noindent 63\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-5 like subunit. [source:swissprot;acc:q9y3k8]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 336.178\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.25973\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 64\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-11 subunit. [source:swissprot;acc:p50152]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 266.868\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 336.159\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.25965\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 65\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(q), alpha subunit. [source:swissprot;acc:p50148]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 267.136\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 336.077\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.25807\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 66\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(y), alpha subunit (alpha-11). [source:swissprot;acc:p29992]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 67\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(t), alpha-2 subunit (transducin alpha-2 chain). [source:swissprot;acc:p19087]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 267.14\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 336.075\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.25805\vspace{3pt}}}\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 68\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(z), alpha subunit (g(x) alpha chain) (gz-alpha). [source:swissprot;acc:p19086]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 267.139\vspace{3pt}}&&\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 69\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(t), alpha-1 subunit (transducin alpha-1 chain). [source:swissprot;acc:p11488]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 267.14\vspace{3pt}}&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 70\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i), alpha-2 subunit (adenylate cyclase-inhibiting g alpha protein). [source:swissprot;acc:p04899]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 267.142\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 336.074\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.25804\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 71\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i), alpha-1 subunit (adenylate cyclase-inhibiting g alpha protein). [source:swissprot;acc:p04898]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 267.144\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 336.073\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.25802\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 72\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(k), alpha subunit (g(i) alpha-3). [source:swissprot;acc:p08754]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 73\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent junctophilin 3 (junctophilin type 3) (jp-3). [source:swissprot;acc:q8wxh2]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 288\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 362\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.25694\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 74\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent junctophilin 2 (junctophilin type 2) (jp-2). [source:swissprot;acc:q9br39]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 75\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent sphingomyelin phosphodiesterase 2 (ec 3.1.4.12) (neutral sphingomyelinase) (nsmase) (n-smase) (lyso-platelet activating factor- phospholipase c) (lyso-paf-plc). [source:swissprot;acc:o60906]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 76\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent db83 protein. [source:swissprot;acc:p57088]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 77\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent voltage-dependent calcium channel gamma-2 subunit (neuronal voltage- gated calcium channel gamma-2 subunit). [source:swissprot;acc:q9y698]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 254.692\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 202.668\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.2567\vspace{3pt}}}\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 78\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent voltage-dependent calcium channel gamma-8 subunit (neuronal voltage- gated calcium channel gamma-8 subunit). [source:swissprot;acc:q8wxs5]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 254.693\vspace{3pt}}}&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 79\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent voltage-dependent calcium channel gamma-3 subunit (neuronal voltage- gated calcium channel gamma-3 subunit). [source:swissprot;acc:o60359]\vspace{3pt}}&&&\\\cline{1-3}\cline{5-5} \parbox{\wcA}{\vspace{3pt}\noindent 80\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent voltage-dependent calcium channel gamma-4 subunit (neuronal voltage- gated calcium channel gamma-4 subunit). [source:swissprot;acc:q9ubn1]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 254.691\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent 1.25669\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 81\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent voltage-dependent calcium channel gamma-5 subunit (neuronal voltage- gated calcium channel gamma-5 subunit). [source:swissprot;acc:q9uf02]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 254.614\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 202.646\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.25645\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 82\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein beta subunit 5 (transducin beta chain 5). [source:swissprot;acc:o14775]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 267.636\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 335.359\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.25304\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 83\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent melanoma antigen, family d, 4 isoform 1; mage1 protein; mage-e1 protein; maged4 protein. [source:refseq;acc:nm\_030801]\vspace{3pt}}&\multirow{18}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 88.2482\vspace{3pt}}}&\multirow{18}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 110.265\vspace{3pt}}}&\multirow{18}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.24949\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 84\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent hepatocellular carcinoma-associated protein hca3. [source:refseq;acc:nm\_138703]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 85\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent melanoma-associated antigen 3 (mage-3 antigen) (antigen mz2-d). [source:swissprot;acc:p43357]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 86\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent melanoma-associated antigen 11 (mage-11 antigen). [source:swissprot;acc:p43364]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 87\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent melanoma-associated antigen 2 (mage-2 antigen). [source:swissprot;acc:p43356]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 88\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent hepatocellular carcinoma-associated protein hca1. [source:refseq;acc:nm\_020932]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 89\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent melanoma-associated antigen 6 (mage-6 antigen) (mage3b). [source:swissprot;acc:p43360]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 90\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent necdin. [source:swissprot;acc:q99608]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 91\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent melanoma-associated antigen d1 (mage-d1 antigen) (neurotrophin receptor-interacting mage homolog) (pro2292). [source:swissprot;acc:q9y5v3]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 92\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent melanoma-associated antigen f1 (mage-f1 antigen). [source:swissprot;acc:q9hay2]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 93\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent melanoma antigen, family b, 6. [source:refseq;acc:nm\_173523]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 94\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent melanoma-associated antigen 4 (mage-4 antigen) (mage-x2) (mage-41). [source:swissprot;acc:p43358]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 95\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent melanoma-associated antigen 9 (mage-9 antigen). [source:swissprot;acc:p43362]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 96\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent melanoma-associated antigen 8 (mage-8 antigen). [source:swissprot;acc:p43361]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 97\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent melanoma-associated antigen c1 (mage-c1 antigen) (cancer-testis antigen ct7). [source:swissprot;acc:o60732]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 98\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent melanoma-associated antigen 12 (mage-12 antigen) (mage12f). [source:swissprot;acc:p43365]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 99\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent melanoma-associated antigen 1 (mage-1 antigen) (antigen mz2-e). [source:swissprot;acc:p43355]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 100\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent melanoma-associated antigen 10 (mage-10 antigen). [source:swissprot;acc:p43363]\vspace{3pt}}&&&\\\hline nd{longtable}
    Legend:
    - Rank is the rank after comparing the two networks
    - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
    - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
    - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
    - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
    - Filtered specifies whether we only included the high confidence microarry measurements or not.

    - http://analysis.yellowcouch.org/