Scientific
MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis
These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.
Proteome Analysis

Below the proteome analysis is presented. The analysis methods are presented in the paper Propagating Differential Gene Expression in Protein Interaction Networks. If you are interested in the most reliable results choose the
value_type as 'ranked' since this provides a very robust analysis method.
intercation map as 'high confidence'
network_comparison type as 'Divided' since this leads to a natural grouping of similar proteins
filtered as 'true' since this will only use the microarray measurements that have a sufficiently large confidence level.
Navigation/Query Panel:
Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
description Gene Network Comparison Type Rank Value Type Filtered Interaction Map red network_comparison green
Results: HTML CSV LaTeX
Showing element 1 to 50 of 77072 in total

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\hline
\parbox{\wcA}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
Network Comparison Type\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Value Type\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
Filtered\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
Interaction Map\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
green\vspace{3pt}}\\
\hline
\hline
\multirow{32}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1,4-alpha-glucan branching enzyme (ec 2.4.1.18) (glycogen branching enzyme) (brancher enzyme). [source:swissprot;acc:q04446]\vspace{3pt}}}&\multirow{16}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
Divided\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
18\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}&\multirow{6}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
185.678\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.32082\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
245.247\vspace{3pt}}\\\cline{3-5}\cline{7-9}
&&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
37\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
0\vspace{3pt}}}&&\parbox{\wcG}{\vspace{3pt}\noindent
334.401\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
2.79409\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
934.348\vspace{3pt}}\\\cline{4-4}\cline{7-9}
&&&\parbox{\wcD}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&&&\parbox{\wcG}{\vspace{3pt}\noindent
101.05\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
10.2338\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
1034.13\vspace{3pt}}\\\cline{3-4}\cline{7-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
53\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&&&\parbox{\wcG}{\vspace{3pt}\noindent
11.844\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.5213\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
18.0183\vspace{3pt}}\\\cline{3-5}\cline{7-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
60\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}}&&\parbox{\wcG}{\vspace{3pt}\noindent
4489.19\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.6231\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
2765.82\vspace{3pt}}\\\cline{3-4}\cline{7-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
64\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&&&\parbox{\wcG}{\vspace{3pt}\noindent
63.8686\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.35128\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
47.2654\vspace{3pt}}\\\cline{3-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
131\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
0\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
645.504\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.31954\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
851.77\vspace{3pt}}\\\cline{3-4}\cline{7-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
146\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&&&\parbox{\wcG}{\vspace{3pt}\noindent
775.72\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.63527\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
1268.51\vspace{3pt}}\\\cline{3-4}\cline{6-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
242\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
15260.6\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.09822\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
13895.8\vspace{3pt}}\\\cline{3-5}\cline{7-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
245\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
8875.01\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.31131\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
6768.05\vspace{3pt}}\\\cline{3-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
537\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
0\vspace{3pt}}}&\multirow{6}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
16.298\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.04801\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
17.0804\vspace{3pt}}\\\cline{3-4}\cline{7-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
629\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&&&\parbox{\wcG}{\vspace{3pt}\noindent
13205.3\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.02915\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
13590.3\vspace{3pt}}\\\cline{3-5}\cline{7-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
1119\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
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1\vspace{3pt}}}&&\parbox{\wcG}{\vspace{3pt}\noindent
43628.5\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.04654\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
41688.5\vspace{3pt}}\\\cline{3-4}\cline{7-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
4130\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&&&\parbox{\wcG}{\vspace{3pt}\noindent
199.383\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.01062\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
201.5\vspace{3pt}}\\\cline{3-4}\cline{7-9}
&&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
4914\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&&&\parbox{\wcG}{\vspace{3pt}\noindent
7853.62\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.00597\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
7900.54\vspace{3pt}}\\\cline{4-4}\cline{7-9}
&&&\parbox{\wcD}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&&&\parbox{\wcG}{\vspace{3pt}\noindent
71.9496\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.00944\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
72.6287\vspace{3pt}}\\\cline{2-9}
&\multirow{16}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
45\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
0\vspace{3pt}}&\multirow{7}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
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334.401\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
599.947\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
934.348\vspace{3pt}}\\\cline{3-5}\cline{7-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
54\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}}&&\parbox{\wcG}{\vspace{3pt}\noindent
185.678\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
59.569\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
245.247\vspace{3pt}}\\\cline{3-4}\cline{7-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
67\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}}&&&\parbox{\wcG}{\vspace{3pt}\noindent
63.8686\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
16.6032\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
47.2654\vspace{3pt}}\\\cline{3-3}\cline{5-5}\cline{7-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
69\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
0\vspace{3pt}}}&&\parbox{\wcG}{\vspace{3pt}\noindent
11.844\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
6.1743\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
18.0183\vspace{3pt}}\\\cline{3-4}\cline{7-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
131\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
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101.05\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
933.08\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
1034.13\vspace{3pt}}\\\cline{3-5}\cline{7-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
164\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
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1\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
4489.19\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1723.37\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
2765.82\vspace{3pt}}\\\cline{3-5}\cline{7-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
172\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
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0\vspace{3pt}}}&&\parbox{\wcG}{\vspace{3pt}\noindent
15260.6\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1364.8\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
13895.8\vspace{3pt}}\\\cline{3-4}\cline{6-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
273\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&&\multirow{5}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
645.504\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
206.266\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
851.77\vspace{3pt}}\\\cline{3-4}\cline{7-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
319\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&&&\parbox{\wcG}{\vspace{3pt}\noindent
775.72\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
492.79\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
1268.51\vspace{3pt}}\\\cline{3-4}\cline{7-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
600\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&&&\parbox{\wcG}{\vspace{3pt}\noindent
13205.3\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
385\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
13590.3\vspace{3pt}}\\\cline{3-4}\cline{7-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
634\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&&&\parbox{\wcG}{\vspace{3pt}\noindent
16.298\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
0.7824\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
17.0804\vspace{3pt}}\\\cline{3-5}\cline{7-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
1423\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
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1\vspace{3pt}}}&&\parbox{\wcG}{\vspace{3pt}\noindent
43628.5\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1940\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
41688.5\vspace{3pt}}\\\cline{3-3}\cline{6-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
1962\vspace{3pt}}&&&\parbox{\wcF}{\vspace{3pt}\noindent
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8875.01\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
2106.96\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
6768.05\vspace{3pt}}\\\cline{3-4}\cline{6-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
4141\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&&\multirow{3}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
199.383\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
2.117\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
201.5\vspace{3pt}}\\\cline{3-4}\cline{7-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
4909\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&&&\parbox{\wcG}{\vspace{3pt}\noindent
7853.62\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
46.92\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
7900.54\vspace{3pt}}\\\cline{3-4}\cline{7-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
4919\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&&&\parbox{\wcG}{\vspace{3pt}\noindent
71.9496\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
0.6791\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
72.6287\vspace{3pt}}\\\cline{1-4}\cline{6-9}
\multirow{16}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1-acyl-sn-glycerol-3-phosphate acyltransferase alpha (ec 2.3.1.51) (1- agp acyltransferase 1) (1-agpat 1) (lysophosphatidic acid acyltransferase-alpha) (lpaat-alpha) (1-acylglycerol-3-phosphate o- acyltransferase 1) (g15 protein). [source:swissprot;acc:q99943]\vspace{3pt}}}&\multirow{8}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
Divided\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
295\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&&\multirow{3}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
30807.7\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.27733\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
39351.7\vspace{3pt}}\\\cline{3-4}\cline{7-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
509\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&&&\parbox{\wcG}{\vspace{3pt}\noindent
7551.8\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.14278\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
8630.06\vspace{3pt}}\\\cline{3-4}\cline{7-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
805\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&&&\parbox{\wcG}{\vspace{3pt}\noindent
74.3557\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.0645\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
79.1513\vspace{3pt}}\\\cline{3-4}\cline{6-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
885\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&&\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
8255.95\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.03993\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
8585.64\vspace{3pt}}\\\cline{3-4}\cline{6-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
1038\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&&\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
186.741\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.03148\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
181.041\vspace{3pt}}\\\cline{3-4}\cline{6-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
1092\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&&\multirow{3}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
73.5001\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.0386\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
76.3375\vspace{3pt}}\\\cline{3-4}\cline{7-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
1328\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&&&\parbox{\wcG}{\vspace{3pt}\noindent
198.342\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.02218\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
194.038\vspace{3pt}}\\\cline{3-4}\cline{7-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
4562\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
Squared\vspace{3pt}}}&&&\parbox{\wcG}{\vspace{3pt}\noindent
46617.7\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.01928\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
45736\vspace{3pt}}\\\cline{2-3}\cline{6-9}
&\multirow{8}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
274\vspace{3pt}}&&&\multirow{3}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
30807.7\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
8544\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
39351.7\vspace{3pt}}\\\cline{3-4}\cline{7-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
310\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&&&\parbox{\wcG}{\vspace{3pt}\noindent
7551.8\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1078.26\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
8630.06\vspace{3pt}}\\\cline{3-4}\cline{7-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
610\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&&&\parbox{\wcG}{\vspace{3pt}\noindent
74.3557\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
4.7956\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
79.1513\vspace{3pt}}\\\cline{3-4}\cline{6-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
780\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
8255.95\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
329.69\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
8585.64\vspace{3pt}}\\\cline{3-4}\cline{7-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
980\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&&&\parbox{\wcG}{\vspace{3pt}\noindent
73.5001\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
2.8374\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
76.3375\vspace{3pt}}\\\cline{3-4}\cline{6-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
1120\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}}&&\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
186.741\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
5.7\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
181.041\vspace{3pt}}\\\cline{3-3}\cline{6-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
1408\vspace{3pt}}&&&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
198.342\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
4.304\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
194.038\vspace{3pt}}\\\cline{3-4}\cline{7-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
4514\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
Squared\vspace{3pt}}}&&&\parbox{\wcG}{\vspace{3pt}\noindent
46617.7\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
881.7\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
45736\vspace{3pt}}\\\cline{1-3}\cline{6-9}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1-acyl-sn-glycerol-3-phosphate acyltransferase beta (ec 2.3.1.51) (1- agp acyltransferase 2) (1-agpat 2) (lysophosphatidic acid acyltransferase-beta) (lpaat-beta) (1-acylglycerol-3-phosphate o- acyltransferase 2). [source:swissprot;acc:o15120]\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
Divided\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
294\vspace{3pt}}&&&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
30826.5\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.2776\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
39383.9\vspace{3pt}}\\\cline{3-4}\cline{7-9}
&&\parbox{\wcC}{\vspace{3pt}\noindent
508\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&&&\parbox{\wcG}{\vspace{3pt}\noindent
7556.75\vspace{3pt}}&\parbox{\wcH}{\vspace{3pt}\noindent
1.14293\vspace{3pt}}&\parbox{\wcI}{\vspace{3pt}\noindent
8636.87\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/