Scientific
MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis
These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.
Proteome Analysis

Below the proteome analysis is presented. The analysis methods are presented in the paper Propagating Differential Gene Expression in Protein Interaction Networks. If you are interested in the most reliable results choose the
value_type as 'ranked' since this provides a very robust analysis method.
intercation map as 'high confidence'
network_comparison type as 'Divided' since this leads to a natural grouping of similar proteins
filtered as 'true' since this will only use the microarray measurements that have a sufficiently large confidence level.
Navigation/Query Panel:
Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Filtered description green Value Type Rank Gene network_comparison Interaction Map red Network Comparison Type
Results: HTML CSV LaTeX
Showing element 1 to 50 of 38536 in total
Filtered: 0
Network Comparison Type: Divided

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\def\wcB{0.125\textwidth}
\def\wcC{0.125\textwidth}
\def\wcD{0.125\textwidth}
\def\wcE{0.125\textwidth}
\def\wcF{0.125\textwidth}
\def\wcG{0.125\textwidth}
\begin{longtable}{|c|c|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Value Type\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
Interaction Map\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
red\vspace{3pt}}\\
\hline
\hline
\multirow{8}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1,4-alpha-glucan branching enzyme (ec 2.4.1.18) (glycogen branching enzyme) (brancher enzyme). [source:swissprot;acc:q04446]\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
17.0804\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
537\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04801\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
16.298\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
18.0183\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
53\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.5213\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
11.844\vspace{3pt}}\\\cline{2-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
851.77\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
131\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.31954\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
645.504\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
934.348\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
37\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
2.79409\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
334.401\vspace{3pt}}\\\cline{2-3}\cline{5-5}\cline{7-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
1034.13\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}}&&\parbox{\wcE}{\vspace{3pt}\noindent
10.2338\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
101.05\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
1268.51\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
146\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.63527\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
775.72\vspace{3pt}}\\\cline{2-5}\cline{7-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
13590.3\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
629\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02915\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
13205.3\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
13895.8\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
242\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09822\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
15260.6\vspace{3pt}}\\\hline
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
17-beta-hydroxysteroid dehydrogenase type vii-like. [source:refseq;acc:nm\_182829]\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
39.5126\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
768\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0106\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
39.0982\vspace{3pt}}\\\cline{2-5}\cline{7-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
4869.42\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
778\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.00902\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
4825.89\vspace{3pt}}\\\cline{2-5}\cline{7-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
10050.9\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
627\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02953\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
10347.7\vspace{3pt}}\\\cline{2-5}\cline{7-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
40451\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
815\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.00447\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
40270.8\vspace{3pt}}\\\cline{1-2}\cline{4-7}
\multirow{8}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
25-hydroxyvitamin d-1 alpha hydroxylase, mitochondrial precursor (ec 1.14.-.-) (25-ohd-1 alpha-hydroxylase) (25-hydroxyvitamin d3 1- alpha-hydroxylase) (vd3 1a hydroxylase) (p450c1 alpha) (p450vd1- alpha). [source:swissprot;acc:o15528]\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
0.344399\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
26\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
128.828\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
44.3683\vspace{3pt}}\\\cline{2-3}\cline{5-5}\cline{7-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
3.80565\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}}&&\parbox{\wcE}{\vspace{3pt}\noindent
3.62106\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
13.7805\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
9.42485\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
131\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.20585\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
11.365\vspace{3pt}}\\\cline{2-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
26.1599\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
19\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
11.6763\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
305.45\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
181.734\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
171\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.22585\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
222.779\vspace{3pt}}\\\cline{2-5}\cline{7-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
296.481\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
697\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03806\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
307.765\vspace{3pt}}\\\cline{2-5}\cline{7-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
14695.2\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
384\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.08587\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
13533.1\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
18499.2\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
47\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.42943\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
12941.7\vspace{3pt}}\\\hline
\multirow{8}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
26s proteasome non-atpase regulatory subunit 10 (26s proteasome regulatory subunit p28) (gankyrin). [source:swissprot;acc:o75832]\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
23.2445\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
793\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.00582\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
23.11\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
32.0298\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
370\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04188\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
30.7424\vspace{3pt}}\\\cline{2-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
1609.88\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
771\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01017\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1593.68\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
2642.79\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
451\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01545\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
2683.61\vspace{3pt}}\\\cline{2-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
6490.54\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
763\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01738\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
6603.33\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
7355.46\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
316\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.17196\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
8620.27\vspace{3pt}}\\\cline{2-5}\cline{7-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
10806\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
379\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03909\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
11228.4\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
11854.2\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
825\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.00181\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
11832.8\vspace{3pt}}\\\cline{1-5}\cline{7-7}
\multirow{8}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
26s proteasome non-atpase regulatory subunit 12 (26s proteasome regulatory subunit p55). [source:swissprot;acc:o00232]\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
26.5693\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
728\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01548\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
26.1642\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
28.5146\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
458\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01531\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
28.0847\vspace{3pt}}\\\cline{2-5}\cline{7-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
2263.85\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
474\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.00763\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
2281.12\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
2331.31\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
785\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.00797\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
2349.9\vspace{3pt}}\\\cline{2-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
5878.56\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
328\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.14785\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
6747.71\vspace{3pt}}\\\cline{2-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
11538\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
665\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02285\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
11801.6\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
11748.1\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
495\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.00195\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
11725.2\vspace{3pt}}\\\cline{2-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
14694\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
591\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07533\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
15800.9\vspace{3pt}}\\\hline
\multirow{8}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
3 beta-hydroxysteroid dehydrogenase (fragments). [source:sptrembl;acc:q9udk8]\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
44.9836\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
438\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.025\vspace{3pt}}}&\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcG}{\vspace{3pt}\noindent
43.8864\vspace{3pt}}}\\\cline{4-4}\cline{6-6}
&&&\parbox{\wcD}{\vspace{3pt}\noindent
662\vspace{3pt}}&&\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\\\cline{2-7}
&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
5046.33\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
492\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.00159\vspace{3pt}}}&\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcG}{\vspace{3pt}\noindent
5038.33\vspace{3pt}}}\\\cline{4-4}\cline{6-6}
&&&\parbox{\wcD}{\vspace{3pt}\noindent
822\vspace{3pt}}&&\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\\\cline{2-7}
&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
11512.3\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
299\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.07178\vspace{3pt}}}&\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcG}{\vspace{3pt}\noindent
12338.7\vspace{3pt}}}\\\cline{4-4}\cline{6-6}
&&&\parbox{\wcD}{\vspace{3pt}\noindent
453\vspace{3pt}}&&\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\\\cline{2-7}
&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
17901.1\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
493\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}}&\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcG}{\vspace{3pt}\noindent
17901.1\vspace{3pt}}}\\\cline{4-4}\cline{6-6}
&&&\parbox{\wcD}{\vspace{3pt}\noindent
836\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\\\cline{1-5}\cline{7-7}
\multirow{6}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
3-hydroxyisobutyryl-coenzyme a hydrolase. [source:refseq;acc:nm\_014362]\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
25.4539\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
442\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.06963\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
27.2263\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
31.1453\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
376\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03923\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
32.3671\vspace{3pt}}\\\cline{2-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
1932.95\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
581\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04278\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
2015.65\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
2853.65\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
438\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0252\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent
2925.57\vspace{3pt}}\\\cline{2-5}\cline{7-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
10466.5\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
327\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05751\vspace{3pt}}&&\parbox{\wcG}{\vspace{3pt}\noindent
9897.29\vspace{3pt}}\\\cline{2-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
10485.1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
703\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03494\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
10851.4\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/