Scientific
MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis
These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.
Proteome Analysis

Below the proteome analysis is presented. The analysis methods are presented in the paper Propagating Differential Gene Expression in Protein Interaction Networks. If you are interested in the most reliable results choose the
value_type as 'ranked' since this provides a very robust analysis method.
intercation map as 'high confidence'
network_comparison type as 'Divided' since this leads to a natural grouping of similar proteins
filtered as 'true' since this will only use the microarray measurements that have a sufficiently large confidence level.
Navigation/Query Panel:
Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX
Showing element 1600 to 1649 of 3228 in total
Value Type: Ranked
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1

\def\wcA{0.16666666666667\textwidth}
\def\wcB{0.16666666666667\textwidth}
\def\wcC{0.16666666666667\textwidth}
\def\wcD{0.16666666666667\textwidth}
\def\wcE{0.16666666666667\textwidth}
\begin{longtable}{|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1600\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
adapter-related protein complex 2 beta 1 subunit (beta-adaptin) (plasma membrane adaptor ha2/ap2 adaptin beta subunit) (clathrin assembly protein complex 2 beta large chain) (ap105b). [source:swissprot;acc:p21851]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
222.103\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
225.675\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01608\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1601\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
phosphomannomutase 2 (ec 5.4.2.8) (pmm 2). [source:swissprot;acc:o15305]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
217.268\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
213.842\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01602\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1602\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
phosphomannomutase 1 (ec 5.4.2.8) (pmm 1) (pmmh-22). [source:swissprot;acc:q92871]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
217.334\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
213.914\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01599\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1603\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
heat shock factor binding protein 1. [source:swissprot;acc:o75506]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
216.62\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
213.22\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01595\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1604\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
protein kinase clk2 (ec 2.7.1.-) (cdc-like kinase 2). [source:swissprot;acc:p49760]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
214.984\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
211.614\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01593\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1605\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
hepatocyte nuclear factor 3-alpha (hnf-3a) (forkhead box protein a1). [source:swissprot;acc:p55317]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
217.322\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
213.916\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01592\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1606\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
apolipoprotein a-i binding protein; apoa-i binding protein. [source:refseq;acc:nm\_144772]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
207.916\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
204.662\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0159\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1607\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
protein kinase clk3 (ec 2.7.1.-) (cdc-like kinase 3). [source:swissprot;acc:p49761]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
214.982\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
211.622\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01588\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1608\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ubiquitin-conjugating enzyme e2 variant 1 isoform b; dna-binding protein. [source:refseq;acc:nm\_003349]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
208.106\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
204.867\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01581\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1609\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
utp--glucose-1-phosphate uridylyltransferase 2 (ec 2.7.7.9) (udp- glucose pyrophosphorylase 2) (udpgp 2) (ugpase 2). [source:swissprot;acc:q16851]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
208.113\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
204.876\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0158\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1610\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ubiquitin-conjugating enzyme e2 variant 2; 1 alpha,25-dihydroxyvitamin d3-inducible; enterocyte differentiation promoting factor; methyl methanesulfonate sensitive 2, s. cerevisiae, homolog of. [source:refseq;acc:nm\_003350]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
208.122\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
204.886\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01579\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1611\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
p10-binding protein. [source:refseq;acc:nm\_024491]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
221.313\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
217.877\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01577\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1612\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
enthoprotin; epsin 4; clathrin interacting protein localized in the trans-golgi region. [source:refseq;acc:nm\_014666]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
221.426\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
224.902\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.0157\vspace{3pt}}}\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
1613\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
hiv-1 tat interactive protein 2, 30kda; tat-interacting protein (30kd); hiv-1 tat interactive protein 2, 30 kda; hiv-1 tat interactive protein 2, 30 kd. [source:refseq;acc:nm\_006410]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
182.378\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
185.241\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1614\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
hepatocyte nuclear factor 3-beta (hnf-3b) (forkhead box protein a2). [source:swissprot;acc:q9y261]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
217.233\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
213.897\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.0156\vspace{3pt}}}\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
1615\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
dna polymerase epsilon subunit b (ec 2.7.7.7) (dna polymerase ii subunit b). [source:swissprot;acc:p56282]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
246.38\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
242.596\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1616\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
n-acetylglutamate synthase. [source:refseq;acc:nm\_153006]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
223.179\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
226.611\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01538\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1617\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
serine hydroxymethyltransferase, cytosolic (ec 2.1.2.1) (serine methylase) (glycine hydroxymethyltransferase) (shmt). [source:swissprot;acc:p34896]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
221.045\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
217.699\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01537\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1618\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
transcription elongation factor a protein 2 (transcription elongation factor s-ii protein 2) (testis-specific s-ii) (transcription elongation factor tfiis.l). [source:swissprot;acc:q15560]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
227.768\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
231.246\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.01527\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1619\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
transcription elongation factor a protein 1 (transcription elongation factor s-ii protein 1) (transcription elongation factor tfiis.o). [source:swissprot;acc:p23193]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1620\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
transcription initiation factor iib (general transcription factor tfiib) (s300-ii). [source:swissprot;acc:q00403]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
228.611\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
225.185\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.01521\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1621\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
thyroid receptor interacting protein 3 (trip-3) (fragment). [source:swissprot;acc:q15649]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1622\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
nhp2-like protein 1 (high mobility group-like nuclear protein 2 homolog 1) ([u4/u6.u5] tri-snrnp 15.5 kda protein) (otk27). [source:swissprot;acc:p55769]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1623\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
nuclear fragile x mental retardation protein interacting protein 1; nuclear fragile x mental retardation intercating protein 1; nuclear fragile x mental retardation protein-interacting protein 1. [source:refseq;acc:nm\_012345]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1624\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
rrp5 protein homolog (programmed cell death protein 11). [source:swissprot;acc:q14690]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
230.643\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
227.194\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01518\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1625\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
c18b11 homolog (44.9kd). [source:refseq;acc:nm\_152260]\vspace{3pt}}&\multirow{6}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
217.446\vspace{3pt}}}&\multirow{6}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
214.2\vspace{3pt}}}&\multirow{6}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.01515\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1626\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
z-protein (protein cgi-119) (s1r protein). [source:swissprot;acc:q9hc24]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1627\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
pp1201 protein. [source:refseq;acc:nm\_022152]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1628\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
lifeguard; kiaa0950 protein. [source:refseq;acc:nm\_012306]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1629\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
sterol regulatory element binding protein-2 (srebp-2) (sterol regulatory element-binding transcription factor 2). [source:swissprot;acc:q12772]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1630\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
sterol regulatory element binding protein-1 (srebp-1) (sterol regulatory element-binding transcription factor 1). [source:swissprot;acc:p36956]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1631\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
g1 to s phase transition protein 1 homolog (gtp-binding protein gst1-hs). [source:swissprot;acc:p15170]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
218.789\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
215.533\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01511\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1632\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
mitotic checkpoint protein bub3. [source:swissprot;acc:o43684]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
221.934\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
218.658\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.01498\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1633\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 207. [source:swissprot;acc:o43670]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1634\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
malonyl-coa decarboxylase, mitochondrial precursor (ec 4.1.1.9) (mcd). [source:swissprot;acc:o95822]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
215.772\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
212.596\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.01494\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1635\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
itchy homolog e3 ubiquitin protein ligase; atrophin-1 interacting protein 4; itchy (mouse homolog) e3 ubiquitin protein ligase; nfe2-associated polypeptide 1; ubiquitin protein ligase itch. [source:refseq;acc:nm\_031483]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1636\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
beclin 1 (coiled-coil myosin-like bcl2-interacting protein) (protein gt197). [source:swissprot;acc:q14457]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
202.358\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
199.408\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.01479\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1637\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
26s protease regulatory subunit 8 (proteasome subunit p45) (thyroid hormone receptor interacting protein 1) (trip1) (msug1 protein) (tat-binding protein homolog 10) (tbp10) (p45/sug). [source:swissprot;acc:p47210]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1638\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
serine hydroxymethyltransferase, mitochondrial precursor (ec 2.1.2.1) (serine methylase) (glycine hydroxymethyltransferase) (shmt). [source:swissprot;acc:p34897]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
220.686\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
217.481\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01474\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1639\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
yl-1 protein (transcription factor-like 1). [source:swissprot;acc:q15906]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
194.516\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
197.364\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.01464\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1640\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
hydroxyacylglutathione hydrolase (ec 3.1.2.6) (glyoxalase ii) (glx ii). [source:swissprot;acc:q16775]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1641\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
proteasome subunit beta type 4 precursor (ec 3.4.25.1) (proteasome beta chain) (macropain beta chain) (multicatalytic endopeptidase complex beta chain) (proteasome chain 3) (hsn3) (hsbpros26). [source:swissprot;acc:p28070]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
218.167\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
215.034\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.01457\vspace{3pt}}}\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
1642\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
m-phase inducer phosphatase 2 (ec 3.1.3.48) (dual specificity phosphatase cdc25b). [source:swissprot;acc:p30305]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
260.269\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
256.531\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1643\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
myofibrillogenesis regulator 1; trans-activated by hepatitis c virus core protein 2; likely ortholog of mouse brain protein 17. [source:refseq;acc:nm\_022572]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
194.476\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
197.305\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01455\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1644\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
secreted modular calcium-binding protein 1. [source:refseq;acc:nm\_022137]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
217.256\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
214.149\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.01451\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1645\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
prefoldin subunit 1. [source:swissprot;acc:o60925]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1646\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
secreted modular calcium-binding protein 2; smooth muscle associated protein 2. [source:refseq;acc:nm\_022138]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1647\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
choline dehydrogenase. [source:refseq;acc:nm\_018397]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1648\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
hydroxyindole o-methyltransferase (ec 2.1.1.4) (hiomt) (acetylserotonin o-methyltransferase) (asmt). [source:swissprot;acc:p46597]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
219.745\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
222.928\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01448\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1649\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
neurotrypsin precursor (ec 3.4.21.-) (motopsin) (leydin). [source:swissprot;acc:p56730]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
219.062\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
215.942\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01445\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/