MK5 Microarray Data

Rank	Gene	description	Value Type	Network Comparison Type	Filtered	Interaction Map	red	green	network_comparison

Results: HTML CSV LaTeX

Showing element 1551 to 1600 of 12912 in total

Network Comparison Type	Divided
Filtered	1
Interaction Map	High confidence

Rank	description	Value Type	red	green	network_comparison	
388	serine racemase (ec 5.1.1.-). [source:swissprot;acc:q9gzt4]	Rooted	50.3345	45.6718	1.10209	
388	small nuclear ribonucleoprotein e (snrnp-e) (sm protein e) (sm-e) (sme). [source:swissprot;acc:p08578]	Ranked	227.575	208.756	1.09015	
389	60s ribosomal protein l34. [source:swissprot;acc:p49207]	Rooted	50.3345	45.6718	1.10209	
389	arginyl-trna synthetase-like; arginine-trna ligase. [source:refseq;acc:nm_020320]	Squared	31819.7	39222.2	1.23264	
389	probable atp-dependent rna helicase p54 (oncogene rck) (dead-box protein 6). [source:swissprot;acc:p26196]	Measured	4533.74	5279.4	1.16447	
389	small nuclear ribonucleoprotein f (snrnp-f) (sm protein f) (sm-f) (smf). [source:swissprot;acc:q15356]	Ranked	227.575	208.756	1.09015	
390	60s ribosomal protein l13, mitochondrial (l13mt). [source:swissprot;acc:q9byd1]	Ranked	241.828	263.62	1.09011	
390	nuclear receptor co-repressor/hdac3 complex subunit tblr1 (tbl1- related protein 1). [source:swissprot;acc:q9bzk7]	Squared	28895.6	35572.8	1.23108	
390	protein transport protein sec61 alpha subunit isoform 2 (sec61 alpha- 2). [source:swissprot;acc:q9y2r3]	Rooted	50.3345	45.6718	1.10209	
390	rw1 protein (fragment). [source:swissprot;acc:q92545]	Measured	4533.74	5279.4	1.16447	
391	40s ribosomal protein s16. [source:swissprot;acc:p17008]	Ranked	241.828	263.62	1.09011	
391	importin beta-1 subunit (karyopherin beta-1 subunit) (nuclear factor p97) (importin 90). [source:swissprot;acc:q14974]	Squared	28895.6	35572.8	1.23108	
391	protein transport protein sec61 alpha subunit isoform 1 (sec61 alpha- 1). [source:swissprot;acc:p38378]	Rooted	50.3345	45.6718	1.10209	
391	tar dna-binding protein-43 (tdp-43). [source:swissprot;acc:q13148]	Measured	3658.76	3144.39	1.16358	
392	60s ribosomal protein l13a (23 kda highly basic protein). [source:swissprot;acc:p40429]	Ranked	241.83	263.615	1.09008	
392	60s ribosomal protein l3-like. [source:swissprot;acc:q92901]	Rooted	50.3313	45.6913	1.10155	
392	atp-dependent rna helicase mgc2835; atp-dependent rna helicase; apoptosis related protein apr-5; dead box helicase 97 kda. [source:refseq;acc:nm_024072]	Measured	3641.89	4236.95	1.16339	
392	transducin beta-like 1x protein (transducin-beta-like 1, x-linked). [source:swissprot;acc:o60907]	Squared	28895.6	35572.8	1.23108	
393	dna-directed rna polymerase ii largest subunit (ec 2.7.7.6) (rpb1). [source:swissprot;acc:p24928]	Rooted	49.8842	45.2875	1.1015	
393	eukaryotic translation initiation factor 4e (eif-4e) (eif4e) (mrna cap-binding protein) (eif-4f 25 kda subunit). [source:swissprot;acc:p06730]	Measured	4490.28	5222.25	1.16301	
393	spliceosomal u5 snrnp-specific 15 kda protein (dim1 protein homolog) (thioredoxin-like u5 snrnp protein u5-15kd). [source:swissprot;acc:o14834]	Ranked	225.719	207.072	1.09005	
393	transducin beta-like 1y protein (transducin-beta-like 1, y-linked). [source:swissprot;acc:q9bq87]	Squared	28895.6	35572.8	1.23108	
394	bai1-associated protein 3; bai-associated protein 3. [source:refseq;acc:nm_003933]	Measured	4490.28	5222.25	1.16301	
394	dipeptidylpeptidase 9; dipeptidyl peptidase 9; dipeptidyl peptidase iv-related protein-2. [source:refseq;acc:nm_139159]	Ranked	218.827	238.407	1.08948	
394	mad protein (max dimerizer). [source:swissprot;acc:q05195]	Squared	17248.4	21214	1.22991	
394	pre-mrna splicing factor prp17 (hprp17) (eh-binding protein 3) (ehb3). [source:swissprot;acc:o60508]	Rooted	58.6533	64.5958	1.10132	
395	dipeptidyl peptidase 8 isoform 2; dipeptidyl peptidase 8. [source:refseq;acc:nm_017743]	Ranked	218.827	238.407	1.08948	
395	max interacting protein 1 (mxi1 protein). [source:swissprot;acc:p50539]	Squared	17254.4	21218.1	1.22972	
395	protein translation factor sui1 homolog (sui1iso1). [source:swissprot;acc:p41567]	Rooted	50.0423	45.4523	1.10098	
395	splicing factor 4 isoform b; rna-binding protein. [source:refseq;acc:nm_021164]	Measured	4532.73	5269.33	1.16251	
396	a-raf proto-oncogene serine/threonine-protein kinase (ec 2.7.1.-) (a-raf-1) (proto-oncogene pks). [source:swissprot;acc:p10398]	Rooted	116.797	106.111	1.10071	
396	max-interacting transcriptional repressor mad4 (max-associated protein 4) (max dimerization protein 4). [source:swissprot;acc:q14582]	Squared	17256.5	21219.6	1.22966	
396	putative eukaryotic translation initiation factor 1a (eif-1a) (eif- 4c). [source:swissprot;acc:o75642]	Ranked	240.801	262.34	1.08945	
396	ribonucleotide reductase m2 b (tp53 inducible); p53-inducible ribonucleotide reductase small subunit 2 homolog. [source:refseq;acc:nm_015713]	Measured	6563.65	7627.29	1.16205	
397	max dimerization protein 3; likely ortholog of mouse max dimerization protein 3. [source:refseq;acc:nm_031300]	Squared	17257.5	21220.3	1.22963	
397	nuclear protein skip (ski-interacting protein) (snw1 protein) (nuclear receptor coactivator ncoa-62). [source:swissprot;acc:q13573]	Measured	5367.04	6233.12	1.16137	
397	raf proto-oncogene serine/threonine-protein kinase (ec 2.7.1.-) (raf-1) (c-raf). [source:swissprot;acc:p04049]	Rooted	116.792	106.107	1.1007	
397	t-complex protein 1, gamma subunit (tcp-1-gamma) (cct-gamma). [source:swissprot;acc:p49368]	Ranked	110.689	101.613	1.08932	
398	imp2 inner mitochondrial membrane protease-like; inner mitochondrial membrane peptidase 2 like. [source:refseq;acc:nm_032549]	Squared	18929.1	23222.8	1.22683	
398	muscle-specific beta 1 integrin binding protein. [source:refseq;acc:nm_014446]	Ranked	218.818	238.358	1.0893	
398	serine/threonine protein phosphatase 2a, 56 kda regulatory subunit, epsilon isoform (pp2a, b subunit, b' epsilon isoform) (pp2a, b subunit, b56 epsilon isoform) (pp2a, b subunit, pr61 epsilon isoform) (pp2a, b subunit, r5 epsilon isoform). [source:swissprot;acc:q16537]	Rooted	116.707	106.044	1.10055	
398	xpa-binding protein 2 (hcnp protein) (pp3898). [source:swissprot;acc:q9hcs7]	Measured	5084.26	5904.1	1.16125	
399	clathrin heavy chain 1 (clh-17). [source:swissprot;acc:q00610]	Ranked	207.889	226.226	1.08821	
399	cyclin g2. [source:swissprot;acc:q16589]	Rooted	116.707	106.044	1.10055	
399	microsomal signal peptidase 18 kda subunit (ec 3.4.-.-) (spase 18 kda subunit) (spc18) (endopeptidase sp18). [source:swissprot;acc:p21378]	Squared	18929.1	23222.8	1.22683	
399	neuronal acetylcholine receptor protein, alpha-7 chain precursor. [source:swissprot;acc:p36544]	Measured	5201.41	4479.76	1.16109	
400	adenylate cyclase, type vi (ec 4.6.1.1) (atp pyrophosphate-lyase) (ca(2+)-inhibitable adenylyl cyclase). [source:swissprot;acc:o43306]	Measured	5201.41	4479.76	1.16109	
400	cyclin g1 (cyclin g). [source:swissprot;acc:p51959]	Rooted	116.707	106.044	1.10055	
400	glycogen [starch] synthase, muscle (ec 2.4.1.11). [source:swissprot;acc:p13807]	Squared	39478.8	48419	1.22646	
400	phosducin-like protein (phlp). [source:swissprot;acc:q13371]	Ranked	207.908	226.218	1.08807	

Legend:
- Rank is the rank after comparing the two networks
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.