Scientific

MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

Proteome Analysis

Below the proteome analysis is presented. The analysis methods are presented in the paper Propagating Differential Gene Expression in Protein Interaction Networks. If you are interested in the most reliable results choose the

  • value_type as 'ranked' since this provides a very robust analysis method.
  • intercation map as 'high confidence'
  • network_comparison type as 'Divided' since this leads to a natural grouping of similar proteins
  • filtered as 'true' since this will only use the microarray measurements that have a sufficiently large confidence level.

    • Navigation/Query Panel:
    Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
    Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
    Results: HTML CSV LaTeX Showing element 1458 to 1507 of 3228 in total 
    Value Type: Measured
    Network Comparison Type: Divided
    Interaction Map: High confidence
    Filtered: 1
    
\def\wcA{0.16666666666667\textwidth}
\def\wcB{0.16666666666667\textwidth}
\def\wcC{0.16666666666667\textwidth}
\def\wcD{0.16666666666667\textwidth}
\def\wcE{0.16666666666667\textwidth}
\begin{longtable}{|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1458\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
mitochondrial ribosomal protein l24. [source:refseq;acc:nm\_024540]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
5672.25\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6104.01\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.07612\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1459\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
65 kda yes-associated protein (yap65). [source:swissprot;acc:p46937]\vspace{3pt}}&&&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
1460\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
p29ing4; candidate tumor suppressor p33 ing1 homolog. [source:refseq;acc:nm\_016162]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5696.65\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6130.26\vspace{3pt}}&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
1461\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
9 kda protein. [source:swissprot;acc:p13994]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5672.25\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6104.01\vspace{3pt}}&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
1462\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
transcriptional co-activator with pdz-binding motif (taz). [source:refseq;acc:nm\_015472]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5672.24\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6103.99\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1463\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
collagen alpha 3(iv) chain precursor (goodpasture antigen). [source:swissprot;acc:q01955]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5672.2\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6103.92\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07611\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1464\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
zasp protein (fragment). [source:sptrembl;acc:q9y4z3]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5671.93\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6103.49\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07609\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1465\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
glycerol-3-phosphate dehydrogenase [nad+], cytoplasmic (ec 1.1.1.8) (gpd-c) (gpdh-c). [source:swissprot;acc:p21695]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5686.74\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6119.36\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.07608\vspace{3pt}}}\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
1466\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
proteasome subunit beta type 5 precursor (ec 3.4.25.1) (proteasome epsilon chain) (macropain epsilon chain) (multicatalytic endopeptidase complex epsilon chain) (proteasome subunit x) (proteasome chain 6) (proteasome subunit mb1). [source:swissprot;acc:p28074]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6523.17\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7019.44\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1467\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
p47 protein isoform a. [source:refseq;acc:nm\_016143]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6444.4\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6932.39\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07572\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1468\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
sphingosine-1-phosphate lyase 1; sphingosine-1-phosphate lyase. [source:refseq;acc:nm\_003901]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
5473.09\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
5887.45\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.07571\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1469\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
4-aminobutyrate aminotransferase, mitochondrial precursor (ec 2.6.1.19) (gamma-amino-n-butyrate transaminase) (gaba transaminase) (gaba aminotransferase) (gaba-at) (gaba-t). [source:swissprot;acc:p80404]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1470\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ornithine aminotransferase, mitochondrial precursor (ec 2.6.1.13) (ornithine--oxo-acid aminotransferase). [source:swissprot;acc:p04181]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1471\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
40s ribosomal protein s8. [source:swissprot;acc:p09058]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5659.45\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6087.55\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07564\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1472\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
26s proteasome non-atpase regulatory subunit 6 (26s proteasome regulatory subunit s10) (p42a) (proteasome regulatory particle subunit p44s10). [source:swissprot;acc:q15008]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5984.47\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6435.42\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07535\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1473\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
calmegin precursor. [source:swissprot;acc:o14967]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
5910.06\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6355.08\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.0753\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1474\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
calnexin precursor (major histocompatibility complex class i antigen-binding protein p88) (p90) (ip90). [source:swissprot;acc:p27824]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1475\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
soluble liver antigen/liver pancreas antigen. [source:refseq;acc:nm\_153825]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1476\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
rna (guanine-7-) methyltransferase. [source:refseq;acc:nm\_003799]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1477\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
palmitoyl-protein thioesterase 2 precursor (ec 3.1.2.22) (palmitoyl- protein hydrolase 2) (ppt-2) (g14). [source:swissprot;acc:q9umr5]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3687.37\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3429.37\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07523\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1478\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
cyclic-amp-dependent transcription factor atf-7 (activating transcription factor 7) (transcription factor atf-a). [source:swissprot;acc:p17544]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5659.22\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6084.68\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07518\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1479\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
hepatocyte nuclear factor 3-alpha (hnf-3a) (forkhead box protein a1). [source:swissprot;acc:p55317]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5787.03\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6221.72\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07511\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1480\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
cyclic-amp-dependent transcription factor atf-2 (activating transcription factor 2) (camp response element binding protein cre- bp1) (hb16). [source:swissprot;acc:p15336]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5660.17\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6085.22\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07509\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1481\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
egf-like-domain, multiple 7; neu1 protein. [source:refseq;acc:nm\_016215]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3688.8\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3431.33\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07504\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1482\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
leng5 protein. [source:refseq;acc:nm\_024075]\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
5372.25\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
5775.21\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.07501\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1483\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
tryptophanyl-trna synthetase (ec 6.1.1.2) (tryptophan--trna ligase) (trprs) (ifp53) (hwrs). [source:swissprot;acc:p23381]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1484\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ribulose-5-phosphate-3-epimerase; ribulose 5-phosphate 3-epimerase. [source:refseq;acc:nm\_006916]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1485\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
tryptophanyl-trna synthetase, mitochondrial precursor (ec 6.1.1.2) (tryptophan--trna ligase) (trprs) ((mt)trprs). [source:swissprot;acc:q9ugm6]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1486\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
thiamin pyrophosphokinase 1; mouse thiamin pyrophosphokinase homolog; thiamine pyrophosphokinase. [source:refseq;acc:nm\_022445]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1487\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
nicotinamide nucleotide adenylyltransferase 3; pyridine nucleotide adenylyltransferase 3. [source:refseq;acc:nm\_178177]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
5573.64\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
5991.58\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.07499\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1488\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
delta 1-pyrroline-5-carboxylate synthetase (p5cs) [includes: glutamate 5-kinase (ec 2.7.2.11) (gamma-glutamyl kinase) (gk); gamma-glutamyl phosphate reductase (gpr) (ec 1.2.1.41) (glutamate-5-semialdehyde dehydrogenase) (glutamyl-gamma-semialdehyde dehydrogenase)]. [source:swissprot;acc:p54886]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1489\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
vesicle-fusing atpase (ec 3.6.4.6) (vesicular-fusion protein nsf) (n- ethylmaleimide sensitive fusion protein) (nem-sensitive fusion protein). [source:swissprot;acc:p46459]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6192.38\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6656.34\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07492\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1490\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
f-actin capping protein alpha-1 subunit (capz alpha-1). [source:swissprot;acc:p52907]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6340.5\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6815.41\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0749\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1491\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
fidgetin-like 1. [source:refseq;acc:nm\_022116]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6057.46\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6510.9\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07486\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1492\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
dna replication licensing factor mcm3 (dna polymerase alpha holoenzyme-associated protein p1) (rlf beta subunit) (p102 protein) (p1-mcm3). [source:swissprot;acc:p25205]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4619.81\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4965.45\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.07482\vspace{3pt}}}\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
1493\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
deoxyhypusine synthase (ec 2.5.1.46) (dhs). [source:swissprot;acc:p49366]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6146.36\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6606.21\vspace{3pt}}&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
1494\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
kelch-like ech-associated protein 1 (cytosolic inhibitor of nrf2). [source:swissprot;acc:q14145]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4619.81\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4965.45\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1495\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
nadh-ubiquinone oxidoreductase pdsw subunit (ec 1.6.5.3) (ec 1.6.99.3) (complex i-pdsw) (ci-pdsw). [source:swissprot;acc:o96000]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6362.92\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6838.6\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07476\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1496\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
apoptosis-inducing factor (aif)-homologous mitochondrion-associated inducer of death; p53-responsive gene 3. [source:refseq;acc:nm\_032797]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5945.56\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6389.63\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07469\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1497\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
f-actin capping protein alpha-2 subunit (capz alpha-2). [source:swissprot;acc:p47755]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6339.08\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6812.45\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07467\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1498\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
40s ribosomal protein s13. [source:swissprot;acc:q02546]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5414.98\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5818.7\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07456\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1499\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
hepatocyte nuclear factor 3-beta (hnf-3b) (forkhead box protein a2). [source:swissprot;acc:q9y261]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5798.31\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6230.55\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07455\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1500\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
coatomer beta' subunit (beta'-coat protein) (beta'-cop) (p102). [source:swissprot;acc:p35606]\vspace{3pt}}&\multirow{6}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
10075.5\vspace{3pt}}}&\multirow{6}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
9377.75\vspace{3pt}}}&\multirow{6}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.0744\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1501\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
coatomer gamma subunit (gamma-coat protein) (gamma-cop). [source:swissprot;acc:q9y678]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1502\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
coatomer zeta-1 subunit (zeta-1 coat protein) (zeta-1 cop) (cgi-120) (hspc181). [source:swissprot;acc:q9y3c3]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1503\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
coatomer delta subunit (delta-coat protein) (delta-cop) (archain). [source:swissprot;acc:p48444]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1504\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
peptidyl-prolyl cis-trans isomerase e (ec 5.2.1.8) (ppiase e) (rotamase e) (cyclophilin e) (cyclophilin 33). [source:swissprot;acc:q9unp9]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1505\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
coatomer zeta-2 subunit (zeta-2 coat protein) (zeta-2 cop). [source:swissprot;acc:q9p299]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1506\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
hexaprenyldihydroxybenzoate methyltransferase, mitochondrial precursor (ec 2.1.1.114) (dihydroxyhexaprenylbenzoate methyltransferase) (3,4- dihydroxy-5-hexaprenylbenzoate methyltransferase) (dhhb methyltransferase) (dhhb-mt) (dhhb-mtase). [source:swissprot;acc:q9nzj6]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
6152.78\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6610.46\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.07439\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1507\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
atp synthase coupling factor b, mitochondrial precursor. [source:swissprot;acc:q99766]\vspace{3pt}}&&&\\\hline
nd{longtable}

    Legend:
    - Rank is the rank after comparing the two networks
    
 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
    
 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
    
 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
    
 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
    
 - Filtered specifies whether we only included the high confidence microarry measurements or not.
    - http://analysis.yellowcouch.org/