MK5 Microarray Data

Rank	Gene	description	Value Type	Network Comparison Type	Interaction Map	Filtered	red	green	network_comparison

Results: HTML CSV LaTeX

Showing element 1575 to 1624 of 12912 in total

Network Comparison Type	Divided
Interaction Map	High confidence
Filtered	1

Rank	description	Value Type	red	green	network_comparison	
394	mad protein (max dimerizer). [source:swissprot;acc:q05195]	Squared	17248.4	21214	1.22991	
394	pre-mrna splicing factor prp17 (hprp17) (eh-binding protein 3) (ehb3). [source:swissprot;acc:o60508]	Rooted	58.6533	64.5958	1.10132	
395	dipeptidyl peptidase 8 isoform 2; dipeptidyl peptidase 8. [source:refseq;acc:nm_017743]	Ranked	218.827	238.407	1.08948	
395	max interacting protein 1 (mxi1 protein). [source:swissprot;acc:p50539]	Squared	17254.4	21218.1	1.22972	
395	protein translation factor sui1 homolog (sui1iso1). [source:swissprot;acc:p41567]	Rooted	50.0423	45.4523	1.10098	
395	splicing factor 4 isoform b; rna-binding protein. [source:refseq;acc:nm_021164]	Measured	4532.73	5269.33	1.16251	
396	a-raf proto-oncogene serine/threonine-protein kinase (ec 2.7.1.-) (a-raf-1) (proto-oncogene pks). [source:swissprot;acc:p10398]	Rooted	116.797	106.111	1.10071	
396	max-interacting transcriptional repressor mad4 (max-associated protein 4) (max dimerization protein 4). [source:swissprot;acc:q14582]	Squared	17256.5	21219.6	1.22966	
396	putative eukaryotic translation initiation factor 1a (eif-1a) (eif- 4c). [source:swissprot;acc:o75642]	Ranked	240.801	262.34	1.08945	
396	ribonucleotide reductase m2 b (tp53 inducible); p53-inducible ribonucleotide reductase small subunit 2 homolog. [source:refseq;acc:nm_015713]	Measured	6563.65	7627.29	1.16205	
397	max dimerization protein 3; likely ortholog of mouse max dimerization protein 3. [source:refseq;acc:nm_031300]	Squared	17257.5	21220.3	1.22963	
397	nuclear protein skip (ski-interacting protein) (snw1 protein) (nuclear receptor coactivator ncoa-62). [source:swissprot;acc:q13573]	Measured	5367.04	6233.12	1.16137	
397	raf proto-oncogene serine/threonine-protein kinase (ec 2.7.1.-) (raf-1) (c-raf). [source:swissprot;acc:p04049]	Rooted	116.792	106.107	1.1007	
397	t-complex protein 1, gamma subunit (tcp-1-gamma) (cct-gamma). [source:swissprot;acc:p49368]	Ranked	110.689	101.613	1.08932	
398	imp2 inner mitochondrial membrane protease-like; inner mitochondrial membrane peptidase 2 like. [source:refseq;acc:nm_032549]	Squared	18929.1	23222.8	1.22683	
398	muscle-specific beta 1 integrin binding protein. [source:refseq;acc:nm_014446]	Ranked	218.818	238.358	1.0893	
398	serine/threonine protein phosphatase 2a, 56 kda regulatory subunit, epsilon isoform (pp2a, b subunit, b' epsilon isoform) (pp2a, b subunit, b56 epsilon isoform) (pp2a, b subunit, pr61 epsilon isoform) (pp2a, b subunit, r5 epsilon isoform). [source:swissprot;acc:q16537]	Rooted	116.707	106.044	1.10055	
398	xpa-binding protein 2 (hcnp protein) (pp3898). [source:swissprot;acc:q9hcs7]	Measured	5084.26	5904.1	1.16125	
399	clathrin heavy chain 1 (clh-17). [source:swissprot;acc:q00610]	Ranked	207.889	226.226	1.08821	
399	cyclin g2. [source:swissprot;acc:q16589]	Rooted	116.707	106.044	1.10055	
399	microsomal signal peptidase 18 kda subunit (ec 3.4.-.-) (spase 18 kda subunit) (spc18) (endopeptidase sp18). [source:swissprot;acc:p21378]	Squared	18929.1	23222.8	1.22683	
399	neuronal acetylcholine receptor protein, alpha-7 chain precursor. [source:swissprot;acc:p36544]	Measured	5201.41	4479.76	1.16109	
400	adenylate cyclase, type vi (ec 4.6.1.1) (atp pyrophosphate-lyase) (ca(2+)-inhibitable adenylyl cyclase). [source:swissprot;acc:o43306]	Measured	5201.41	4479.76	1.16109	
400	cyclin g1 (cyclin g). [source:swissprot;acc:p51959]	Rooted	116.707	106.044	1.10055	
400	glycogen [starch] synthase, muscle (ec 2.4.1.11). [source:swissprot;acc:p13807]	Squared	39478.8	48419	1.22646	
400	phosducin-like protein (phlp). [source:swissprot;acc:q13371]	Ranked	207.908	226.218	1.08807	
401	adenylate cyclase, type v (ec 4.6.1.1) (atp pyrophosphate-lyase) (adenylyl cyclase) (fragment). [source:swissprot;acc:o95622]	Measured	5201.41	4479.76	1.16109	
401	axonemal dynein light intermediate polypeptide 1 (inner dynein arm light chain, axonemal) (hp28). [source:swissprot;acc:o14645]	Squared	33044.3	40524.8	1.22638	
401	replication protein a 70 kda dna-binding subunit (rp-a) (rf-a) (replication factor-a protein 1) (single-stranded dna-binding protein). [source:swissprot;acc:p27694]	Ranked	207.908	226.218	1.08807	
401	serine/threonine protein phosphatase 2a, 56 kda regulatory subunit, alpha isoform (pp2a, b subunit, b' alpha isoform) (pp2a, b subunit, b56 alpha isoform) (pp2a, b subunit, pr61 alpha isoform) (pp2a, b subunit, r5 alpha isoform). [source:swissprot;acc:q15172]	Rooted	116.707	106.044	1.10055	
402	endo-beta-n-acetylglucosaminidase. [source:refseq;acc:nm_022759]	Squared	39472	48393.1	1.22601	
402	eukaryotic translation initiation factor 6 (eif-6) (b4 integrin interactor) (cab) (p27(bbp)) (b(2)gcn homolog). [source:swissprot;acc:p56537]	Rooted	50.1918	55.2294	1.10037	
402	leucine-rich repeat-containing protein 15 precursor (hlib). [source:swissprot;acc:q8tf66]	Measured	5201.41	4479.76	1.16109	
402	replication protein a 32 kda subunit (rp-a) (rf-a) (replication factor-a protein 2). [source:swissprot;acc:p15927]	Ranked	207.908	226.218	1.08807	
403	fem-1 homolog b; fem-1-like death receptor binding protein; fem-1 (c.elegans) homolog b. [source:refseq;acc:nm_015322]	Measured	5201.41	4479.76	1.16109	
403	glycogen [starch] synthase, liver (ec 2.4.1.11). [source:swissprot;acc:p54840]	Squared	39463.9	48362.1	1.22548	
403	nucleotide-binding protein 1 (nbp 1). [source:swissprot;acc:p53384]	Rooted	59.6834	65.6741	1.10037	
403	phosducin (phd) (33 kda phototransducing protein) (meka protein). [source:swissprot;acc:p20941]	Ranked	207.908	226.218	1.08807	
404	adenylosuccinate synthetase (ec 6.3.4.4) (imp--aspartate ligase) (adss) (ampsase). [source:swissprot;acc:p30520]	Squared	26819.1	32855.4	1.22507	
404	dna repair protein rad52 homolog. [source:swissprot;acc:p43351]	Ranked	207.908	226.218	1.08807	
404	leucine-rich repeat protein lrrc3 precursor. [source:swissprot;acc:q9by71]	Measured	5201.41	4479.76	1.16109	
404	nucleotide binding protein 2 (nbp 2). [source:swissprot;acc:q9y5y2]	Rooted	59.6834	65.6741	1.10037	
405	adenylosuccinate synthase-like 1. [source:refseq;acc:nm_152328]	Squared	26822.2	32858.1	1.22503	
405	b-raf proto-oncogene serine/threonine-protein kinase (ec 2.7.1.-) (p94) (v-raf murine sarcoma viral oncogene homolog b1). [source:swissprot;acc:p15056]	Rooted	116.576	105.948	1.10031	
405	clathrin heavy chain 2 (clh-22). [source:swissprot;acc:p53675]	Ranked	207.931	226.209	1.0879	
405	laminin gamma-1 chain precursor (laminin b2 chain). [source:swissprot;acc:p11047]	Measured	5201.41	4479.76	1.16109	
406	60s ribosomal protein l12. [source:swissprot;acc:p30050]	Rooted	49.9858	45.4433	1.09996	
406	serine protease htra2, mitochondrial precursor (ec 3.4.21.-) (high temperature requirement protein a2) (htra2) (omi stress-regulated endoprotease) (serine proteinase omi). [source:swissprot;acc:o43464]	Squared	18995.7	23245.6	1.22373	
406	thymic stromal co-transporter. [source:refseq;acc:nm_033051]	Measured	5201.41	4479.76	1.16109	
406	transcription factor dp-1 (e2f dimerization partner 1) (drtf1- polypeptide-1) (drtf1). [source:swissprot;acc:q14186]	Ranked	265.634	244.304	1.08731	

Legend:
- Rank is the rank after comparing the two networks
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.