MK5 Microarray Data

Rank	Gene	description	Value Type	Network Comparison Type	Interaction Map	Filtered	red	green	network_comparison

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Showing element 1730 to 1779 of 12912 in total

Network Comparison Type	Divided
Interaction Map	High confidence
Filtered	1

Rank	description	Value Type	red	green	network_comparison	
433	laminin gamma-1 chain precursor (laminin b2 chain). [source:swissprot;acc:p11047]	Rooted	54.4927	49.6125	1.09837	
433	mitochondrial processing peptidase alpha subunit, mitochondrial precursor (ec 3.4.24.64) (alpha-mpp) (p-55) (ha1523). [source:swissprot;acc:q10713]	Measured	5244.88	6036.38	1.15091	
433	programmed cell death protein 8, mitochondrial precursor (ec 1.-.-.-) (apoptosis-inducing factor). [source:swissprot;acc:o95831]	Ranked	212.547	229.411	1.07934	
434	splicing factor 3b subunit 1 (spliceosome associated protein 155) (sap 155) (sf3b155) (pre-mrna splicing factor sf3b 155 kda subunit). [source:swissprot;acc:o75533]	Squared	18306.1	22230.6	1.21438	
434	t-box transcription factor tbx6 (t-box protein 6). [source:swissprot;acc:o95947]	Ranked	212.547	229.411	1.07934	
434	thymic stromal co-transporter. [source:refseq;acc:nm_033051]	Rooted	54.4927	49.6125	1.09837	
434	ubiquinol-cytochrome c reductase complex core protein i, mitochondrial precursor (ec 1.10.2.2). [source:swissprot;acc:p31930]	Measured	5246.38	6037.37	1.15077	
435	60s ribosomal protein l19. [source:swissprot;acc:p14118]	Rooted	50.832	46.3081	1.09769	
435	cytochrome b5 reductase b5r.2. [source:refseq;acc:nm_016229]	Squared	26598.9	32283.5	1.21372	
435	polymerase (dna directed) iota; rad30 (s. cerevisiae) homolog b; polymerase (dna-directed), iota. [source:refseq;acc:nm_007195]	Ranked	221.522	205.286	1.07909	
435	proline synthetase co-transcribed bacterial homolog protein. [source:swissprot;acc:o94903]	Measured	5233.86	6022.6	1.1507	
436	arg/abl-interacting protein 2 isoform 2; arg binding protein 2. [source:refseq;acc:nm_021069]	Measured	6230.94	7168.2	1.15042	
436	cytochrome b5 reductase 1 (b5r.1). [source:refseq;acc:nm_016243]	Squared	26598.9	32283.5	1.21372	
436	paxillin. [source:swissprot;acc:p49023]	Ranked	221.522	205.286	1.07909	
436	putative glialblastoma cell differentiation-related; putative glialblastoma cell differentiation-related protein. [source:refseq;acc:nm_016172]	Rooted	210.928	192.165	1.09764	
437	cdc42-interacting protein 4 (thyroid receptor interacting protein 10) (trip-10). [source:swissprot;acc:q15642]	Ranked	209.921	226.459	1.07878	
437	nadh-cytochrome b5 reductase (ec 1.6.2.2) (b5r). [source:swissprot;acc:p00387]	Squared	26598.9	32283.5	1.21372	
437	suppressor of swi4 1 homolog (ssf-1) (peter pan homolog). [source:swissprot;acc:q9nq55]	Measured	3779.92	4348.48	1.15042	
437	zinc finger protein t86. [source:swissprot;acc:o00488]	Rooted	51.0466	56.024	1.09751	
438	arg/abl-interacting protein 2 isoform 2; arg binding protein 2. [source:refseq;acc:nm_021069]	Squared	28863.2	35031.5	1.21371	
438	bag-family molecular chaperone regulator-3 (bcl-2 binding athanogene- 3) (bag-3) (bcl-2-binding protein bis) (docking protein cair-1). [source:swissprot;acc:o95817]	Rooted	55.1867	60.5522	1.09722	
438	n-terminal acetyltransferase complex ard1 subunit homolog (ec 2.3.1.-). [source:swissprot;acc:p41227]	Ranked	233.723	216.674	1.07869	
438	swi/snf-related, matrix-associated, actin-dependent regulator of chromatin subfamily f member 1 (swi-snf complex protein p270) (b120). [source:swissprot;acc:o14497]	Measured	6252.58	7192.88	1.15039	
439	40s ribosomal protein s9. [source:swissprot;acc:p46781]	Ranked	238.986	257.784	1.07866	
439	cell division cycle protein 23; anaphase-promoting complex subunit 8. [source:refseq;acc:nm_004661]	Squared	51616.7	42588.9	1.21198	
439	dok-like protein. [source:refseq;acc:nm_024872]	Rooted	63.2134	69.352	1.09711	
439	programmed cell death protein 6 (probable calcium-binding protein alg- 2). [source:swissprot;acc:o75340]	Measured	6252.58	7192.88	1.15039	
440	calcium-dependent protease, small subunit (calpain regulatory subunit) (calcium-activated neutral proteinase) (canp). [source:swissprot;acc:p04632]	Measured	6251.91	7192.08	1.15038	
440	dna topoisomerase ii, alpha isozyme (ec 5.99.1.3). [source:swissprot;acc:p11388]	Squared	26348.4	31925.8	1.21168	
440	docking protein 2 (p56(dok-2)) (downstream of tyrosine kinase 2). [source:swissprot;acc:o60496]	Rooted	63.2134	69.352	1.09711	
440	highly expressed in cancer, rich in leucine heptad repeats. [source:refseq;acc:nm_006101]	Ranked	231.802	249.983	1.07843	
441	dna topoisomerase ii, beta isozyme (ec 5.99.1.3). [source:swissprot;acc:q02880]	Squared	26348.7	31924.3	1.21161	
441	docking protein 1 (p62(dok)) (downstream of tyrosine kinase 1) (pp62). [source:swissprot;acc:q99704]	Rooted	63.2134	69.352	1.09711	
441	grancalcin. [source:swissprot;acc:p28676]	Measured	6251.96	7192.13	1.15038	
441	grb2-related adaptor protein. [source:swissprot;acc:q13588]	Ranked	223.457	207.222	1.07835	
442	centromere protein j; centrosomal p4.1-associated protein; lyst-interacting protein lip1; lag-3-associated protein. [source:refseq;acc:nm_018451]	Squared	51286.6	42334.5	1.21146	
442	e2a-pbx1-associated protein; putative 47 kda protein. [source:refseq;acc:nm_020140]	Ranked	223.802	207.55	1.0783	
442	sorcin (22 kda protein) (cp-22) (v19). [source:swissprot;acc:p30626]	Measured	6251.99	7192.17	1.15038	
442	tyrosine-protein kinase frk (ec 2.7.1.112) (nuclear tyrosine protein kinase rak). [source:swissprot;acc:p42685]	Rooted	63.2134	69.352	1.09711	
443	60s ribosomal protein l10a (csa-19). [source:swissprot;acc:p53025]	Rooted	50.1766	45.7369	1.09707	
443	brg1-binding protein eld/osa1; eld (eyelid)/osa protein. [source:refseq;acc:nm_020732]	Measured	6252.27	7192.51	1.15038	
443	neuron navigator 2 isoform l; retinoic acid inducible in neuroblastoma; pore membrane and/or filament interacting like protein 2; helicase helad1. [source:refseq;acc:nm_145117]	Ranked	223.79	207.539	1.0783	
443	translation initiation factor if-2, mitochondrial precursor (if-2mt) (if-2(mt)). [source:swissprot;acc:p46199]	Squared	26472.8	32067.7	1.21135	
444	60s ribosomal protein l10 (qm protein) (tumor suppressor qm) (laminin receptor homolog). [source:swissprot;acc:p27635]	Rooted	50.1636	45.7275	1.09701	
444	neuron navigator 1; neuron navigator-1; pore membrane and/or filament interacting like protein 3. [source:refseq;acc:nm_020443]	Ranked	223.801	207.549	1.0783	
444	probable rrna processing protein ebp2 (ebna1 binding protein 2) (nucleolar protein p40). [source:swissprot;acc:q99848]	Measured	3758.67	4322.87	1.15011	
444	ubiquitin-conjugating enzyme e2 e1 (ec 6.3.2.19) (ubiquitin-protein ligase e1) (ubiquitin carrier protein e1) (ubch6). [source:swissprot;acc:p51965]	Squared	58831	48584.2	1.21091	
445	ad24 protein. [source:refseq;acc:nm_022451]	Measured	3753.71	4315.95	1.14978	
445	neuron navigator 3; pore membrane and/or filament interacting like protein 1; steerin 3. [source:refseq;acc:nm_014903]	Ranked	223.801	207.549	1.0783	
445	ribosomal protein l10-like protein. [source:refseq;acc:nm_080746]	Rooted	50.1635	45.7274	1.09701	

Legend:
- Rank is the rank after comparing the two networks
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.