Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


Navigation/Query Panel:
Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 51 to 100 of 3730 in total
Value Type: Measured
Network Comparison Type: Divided
Interaction Map: High confidence
\def\wcA{0.14285714285714\textwidth} \def\wcB{0.14285714285714\textwidth} \def\wcC{0.14285714285714\textwidth} \def\wcD{0.14285714285714\textwidth} \def\wcE{0.14285714285714\textwidth} \def\wcF{0.14285714285714\textwidth} \begin{longtable}{|c|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Filtered\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 26\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent fatty acid desaturase 1; linoleoyl-coa desaturase (delta-6-desaturase)-like 1; delta-5 desaturase; delta-5 fatty acid desaturase. [source:refseq;acc:nm\_013402]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 153\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 662\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 4.3268\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-12 subunit. [source:swissprot;acc:q9ubi6]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 1833.01\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 892.67\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.0534\vspace{3pt}}\\\cline{1-2}\cline{4-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 27\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-4 subunit. [source:swissprot;acc:p50150]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 1834.33\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 895.134\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.04922\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent phenylethanolamine n-methyltransferase (ec 2.1.1.28) (pnmtase) (noradrenaline n-methyltransferase). [source:swissprot;acc:p11086]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 570\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 139\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 4.10072\vspace{3pt}}}\\\cline{1-2} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 28\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent beta-carotene dioxygenase 2; putative b,b-carotene-9',10'-dioxygenase. [source:refseq;acc:nm\_031938]\vspace{3pt}}&&&&\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-3 subunit. [source:swissprot;acc:p29798]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 1834.36\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 895.194\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.04912\vspace{3pt}}\\\cline{1-2}\cline{4-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 29\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-8 subunit (gamma-9). [source:swissprot;acc:q9uk08]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 1834.52\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 895.507\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.04858\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent potassium voltage-gated channel, shal-related subfamily, member 2; voltage-sensitive potassium channel; voltage-gated potassium channel kv4.2. [source:refseq;acc:nm\_012281]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 111.278\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 434.911\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 3.90833\vspace{3pt}}\\\cline{1-2}\cline{4-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 30\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent dystrophin. [source:swissprot;acc:p11532]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 427.217\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 111.739\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 3.82335\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-5 subunit. [source:swissprot;acc:p30670]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 1834.59\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 895.633\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.04837\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 31\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent dok-like protein. [source:refseq;acc:nm\_024872]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 35\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 3500000\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-10 subunit. [source:swissprot;acc:p50151]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 1834.63\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 895.697\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.04827\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 32\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent cell division protein kinase 8 (ec 2.7.1.-) (protein kinase k35). [source:swissprot;acc:p49336]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 598\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 184\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 3.25\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-5 like subunit. [source:swissprot;acc:q9y3k8]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 1834.73\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 895.893\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.04793\vspace{3pt}}\\\cline{1-2}\cline{4-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 33\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-11 subunit. [source:swissprot;acc:p50152]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 1835.3\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 896.972\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.04611\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent lim domain binding 1; carboxy terminal lim domain protein 2; lim domain-binding factor-1. [source:refseq;acc:nm\_003893]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 12.6208\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 39.8063\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 3.15402\vspace{3pt}}\\\cline{1-2}\cline{4-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 34\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent glucosamine-6-phosphate isomerase (ec 3.5.99.6) (glucosamine-6- phosphate deaminase) (gnpda) (glcn6p deaminase) (oscillin). [source:swissprot;acc:p46926]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 143\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 47\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 3.04255\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(y), alpha subunit (alpha-11). [source:swissprot;acc:p29992]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 1836.71\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 907.546\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.02382\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 35\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent adp,atp carrier protein, liver isoform t2 (adp/atp translocase 3) (adenine nucleotide translocator 3) (ant 3). [source:swissprot;acc:p12236]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 459.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1377\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.99674\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(q), alpha subunit. [source:swissprot;acc:p50148]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 1836.71\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 907.564\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.02378\vspace{3pt}}\\\cline{1-2}\cline{4-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 36\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(z), alpha subunit (g(x) alpha chain) (gz-alpha). [source:swissprot;acc:p19086]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 1836.76\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 907.741\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.02344\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent heparan sulfate 6-o-sulfotransferase 2. [source:refseq;acc:nm\_147174]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 157\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 56\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.80357\vspace{3pt}}\\\cline{1-2}\cline{4-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 37\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent 1,4-alpha-glucan branching enzyme (ec 2.4.1.18) (glycogen branching enzyme) (brancher enzyme). [source:swissprot;acc:q04446]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 334.401\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 934.348\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.79409\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(t), alpha-1 subunit (transducin alpha-1 chain). [source:swissprot;acc:p11488]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 1836.76\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 907.763\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.02339\vspace{3pt}}\\\cline{1-2}\cline{5-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 38\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(t), alpha-2 subunit (transducin alpha-2 chain). [source:swissprot;acc:p19087]\vspace{3pt}}&&&\parbox{\wcE}{\vspace{3pt}\noindent 907.774\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.02337\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent zinc finger protein slug (neural crest transcription factor slug) (snail homolog 2). [source:swissprot;acc:o43623]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 320.012\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 120.429\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.65727\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 39\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i), alpha-2 subunit (adenylate cyclase-inhibiting g alpha protein). [source:swissprot;acc:p04899]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 1836.8\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 907.903\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.02312\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent microtubule-associated protein, rp/eb family, member 2; t-cell activation protein, eb1 family; apc-binding protein eb1. [source:refseq;acc:nm\_014268]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 482.426\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 192.295\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.50878\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 40\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i), alpha-1 subunit (adenylate cyclase-inhibiting g alpha protein). [source:swissprot;acc:p04898]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 1836.81\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 907.978\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.02297\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent nanos (fragment). [source:sptrembl;acc:q8wy41]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 377\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 151\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.49669\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 41\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(k), alpha subunit (g(i) alpha-3). [source:swissprot;acc:p08754]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 1836.81\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 907.978\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.02297\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent nadh-ubiquinone oxidoreductase 13 kda-b subunit (ec 1.6.5.3) (ec 1.6.99.3) (complex i-13kd-b) (ci-13kd-b) (complex i subunit b13). [source:swissprot;acc:q16718]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 266\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 645\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.42481\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 42\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein beta subunit 5 (transducin beta chain 5). [source:swissprot;acc:o14775]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 1857.32\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 958.237\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.93827\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent presenilin enhancer 2; hematopoietic stem/progenitor cells protein mds033. [source:refseq;acc:nm\_172341]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 205.439\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 86.9525\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.36266\vspace{3pt}}\\\cline{1-2}\cline{4-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 43\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent elongation factor ts, mitochondrial precursor (ef-ts) (ef-tsmt). [source:swissprot;acc:p43897]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 263.66\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 587.988\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.2301\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(t) beta subunit 3 (transducin beta chain 3). [source:swissprot;acc:p16520]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 1881.02\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1027.36\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.83093\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 44\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent acyl-coa dehydrogenase, short/branched chain specific, mitochondrial precursor (ec 1.3.99.-) (sbcad) (2-methyl branched chain acyl-coa dehydrogenase) (2-mebcad) (2-methylbutyryl-coenzyme a dehydrogenase) (2-methylbutyryl-coa dehydrogenase). [source:swissprot;acc:p45954]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 45.4292\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 98.5074\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.16837\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(t) beta subunit 1 (transducin beta chain 1). [source:swissprot;acc:p04901]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 1931.34\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1057.39\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.82652\vspace{3pt}}\\\cline{1-2}\cline{4-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 45\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein beta subunit 4 (transducin beta chain 4). [source:swissprot;acc:q9hav0]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 1926.69\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1056.02\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.82448\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent tigger transposable element derived 6. [source:refseq;acc:nm\_030953]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 202.374\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 438.605\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.1673\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 46\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent neurogenic differentiation factor 2 (neurod2). [source:swissprot;acc:q15784]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 779.167\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1390.33\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.78438\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent tigger transposable element derived 7; jerky (mouse) homolog-like. [source:refseq;acc:nm\_033208]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 202.163\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 438.035\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.16674\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 47\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent chromodomain helicase-dna-binding protein 3 (chd-3) (mi-2 autoantigen 240 kda protein) (mi2-alpha). [source:swissprot;acc:q12873]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 779.167\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1390.33\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.78438\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent tigger transposable element derived 1; jerky (mouse) homolog-like. [source:refseq;acc:nm\_145702]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 202.156\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 438.016\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.16672\vspace{3pt}}\\\cline{1-2}\cline{4-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 48\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent deltex homolog 1; hdx-1. [source:refseq;acc:nm\_004416]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 870.482\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 403.196\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.15895\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent doc-1 related protein (doc-1r). [source:swissprot;acc:o75956]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 779.167\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1390.33\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 1.78438\vspace{3pt}}}\\\cline{1-2} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 49\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent neurogenic differentiation factor 6 (neurod6) (my051 protein). [source:swissprot;acc:q96nk8]\vspace{3pt}}&&&&\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent selenide,water dikinase 2 (ec 2.7.9.3) (selenophosphate synthetase 2) (selenium donor protein 2). [source:swissprot;acc:q99611]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 72\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 151\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.09722\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 50\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent neurogenic differentiation factor 1 (neurod1) (neurod). [source:swissprot;acc:q13562]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 779.167\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1390.33\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.78438\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent transcription factor 4 (immunoglobulin transcription factor 2) (itf-2) (sl3-3 enhancer factor 2) (sef-2). [source:swissprot;acc:p15884]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 44\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 21\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.09524\vspace{3pt}}\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/