Scientific

MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


Navigation/Query Panel:
Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Rank Gene Value Type description Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 1 to 50 of 14920 in total 
Network Comparison Type: Divided
Interaction Map: High confidence

\def\wcA{0.125\textwidth}
\def\wcB{0.125\textwidth}
\def\wcC{0.125\textwidth}
\def\wcD{0.125\textwidth}
\def\wcE{0.125\textwidth}
\def\wcF{0.125\textwidth}
\def\wcG{0.125\textwidth}
\begin{longtable}{|c|c|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
Value Type\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Filtered\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\multirow{8}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
Measured\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
mitochondrial 28s ribosomal protein s32 (s32mt) (mrp-s32) (ptd007) (hspc204). [source:swissprot;acc:q9y6g3]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
364\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
36400000\vspace{3pt}}\\\cline{3-7}
&&\parbox{\wcC}{\vspace{3pt}\noindent
rad50-interacting protein 1. [source:refseq;acc:nm\_021930]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
450.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
2394.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
5.31521\vspace{3pt}}\\\cline{2-7}
&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
adp-ribosylation factor gtpase-activating protein 3 (arf gap 3). [source:swissprot;acc:q9np61]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
4294\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
15915\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
3.70633\vspace{3pt}}\\\cline{3-7}
&&\parbox{\wcC}{\vspace{3pt}\noindent
putative glialblastoma cell differentiation-related; putative glialblastoma cell differentiation-related protein. [source:refseq;acc:nm\_016172]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
10\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
24\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
2.4\vspace{3pt}}\\\cline{2-7}
&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
Squared\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
cab2. [source:refseq;acc:nm\_033419]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
7.16592\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
716592\vspace{3pt}}\\\cline{3-7}
&&\parbox{\wcC}{\vspace{3pt}\noindent
rad50-interacting protein 1. [source:refseq;acc:nm\_021930]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
48.0356\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1357.07\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
28.2513\vspace{3pt}}\\\cline{2-7}
&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
mitochondrial 28s ribosomal protein s32 (s32mt) (mrp-s32) (ptd007) (hspc204). [source:swissprot;acc:q9y6g3]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
19.0788\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1907880\vspace{3pt}}\\\cline{3-7}
&&\parbox{\wcC}{\vspace{3pt}\noindent
rad50-interacting protein 1. [source:refseq;acc:nm\_021930]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
21.225\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
48.9336\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
2.30547\vspace{3pt}}\\\hline
\multirow{8}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
2\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
Measured\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
cab2. [source:refseq;acc:nm\_033419]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
174\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
17400000\vspace{3pt}}\\\cline{3-7}
&&\parbox{\wcC}{\vspace{3pt}\noindent
rho-related btb domain-containing protein 2 (deleted in breast cancer 2 gene protein) (p83). [source:swissprot;acc:q9byz6]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
450.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
2394.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
5.31521\vspace{3pt}}\\\cline{2-3}\cline{5-7}
&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
mannosyl-oligosaccharide 1,2-alpha-mannosidase ib (ec 3.2.1.113) (processing alpha-1,2-mannosidase ib) (alpha-1,2-mannosidase ib) (mannosidase alpha class 1a member 2). [source:swissprot;acc:o60476]\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent
15\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
28\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.86667\vspace{3pt}}\\\cline{3-7}
&&\parbox{\wcC}{\vspace{3pt}\noindent
mln 64 protein (star-related lipid transfer protein 3) (stard3) (start domain-containing protein 3) (cab1 protein). [source:swissprot;acc:q14849]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
5865\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
14977\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
2.55362\vspace{3pt}}\\\cline{2-3}\cline{5-7}
&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
Squared\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
nuclear receptor co-repressor/hdac3 complex subunit tblr1 (tbl1- related protein 1). [source:swissprot;acc:q9bzk7]\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent
5.61325\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
561325\vspace{3pt}}\\\cline{3-7}
&&\parbox{\wcC}{\vspace{3pt}\noindent
rho-related btb domain-containing protein 2 (deleted in breast cancer 2 gene protein) (p83). [source:swissprot;acc:q9byz6]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
48.0356\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1357.07\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
28.2513\vspace{3pt}}\\\cline{2-7}
&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
nuclear receptor co-repressor/hdac3 complex subunit tblr1 (tbl1- related protein 1). [source:swissprot;acc:q9bzk7]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
12.4097\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1240970\vspace{3pt}}\\\cline{3-7}
&&\parbox{\wcC}{\vspace{3pt}\noindent
rho-related btb domain-containing protein 2 (deleted in breast cancer 2 gene protein) (p83). [source:swissprot;acc:q9byz6]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
21.225\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
48.9336\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
2.30547\vspace{3pt}}\\\cline{1-3}\cline{5-7}
\multirow{8}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
3\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
Measured\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
homeobox protein hlx1 (homeobox protein hb24). [source:swissprot;acc:q14774]\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent
2597.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
698.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
3.71868\vspace{3pt}}\\\cline{3-7}
&&\parbox{\wcC}{\vspace{3pt}\noindent
pyridoxine 5'-phosphate oxidase. [source:refseq;acc:nm\_018129]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
109\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
10900000\vspace{3pt}}\\\cline{2-7}
&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
cytohesin 1 (sec7 homolog b2-1). [source:swissprot;acc:q15438]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
15\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
28\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.86667\vspace{3pt}}\\\cline{3-7}
&&\parbox{\wcC}{\vspace{3pt}\noindent
nif3-like protein 1 (amyotrophic lateral sclerosis 2 chromosomal region candidate gene protein 1) (my018 protein) (mds015). [source:swissprot;acc:q9gzt8]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
4475.84\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
11083.9\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
2.47638\vspace{3pt}}\\\cline{2-7}
&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
Squared\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
homeobox protein hlx1 (homeobox protein hb24). [source:swissprot;acc:q14774]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1596.92\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
115.48\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
13.8285\vspace{3pt}}\\\cline{3-7}
&&\parbox{\wcC}{\vspace{3pt}\noindent
transducin beta-like 1y protein (transducin-beta-like 1, y-linked). [source:swissprot;acc:q9bq87]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
5.61325\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
561325\vspace{3pt}}\\\cline{2-7}
&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
homeobox protein hlx1 (homeobox protein hb24). [source:swissprot;acc:q14774]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
50.9657\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
26.4292\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.92839\vspace{3pt}}\\\cline{3-7}
&&\parbox{\wcC}{\vspace{3pt}\noindent
transducin beta-like 1y protein (transducin-beta-like 1, y-linked). [source:swissprot;acc:q9bq87]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
12.4097\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1240970\vspace{3pt}}\\\hline
\multirow{8}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
4\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
Measured\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
hbs1-like. [source:refseq;acc:nm\_006620]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
2597.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
698.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
3.71868\vspace{3pt}}\\\cline{3-7}
&&\parbox{\wcC}{\vspace{3pt}\noindent
homeobox protein hox-c4 (hox-3e) (cp19). [source:swissprot;acc:p09017]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
89\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
8900000\vspace{3pt}}\\\cline{2-7}
&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
cytohesin 2 (arf nucleotide-binding site opener) (arno protein) (arf exchange factor). [source:swissprot;acc:q99418]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
15\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
28\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.86667\vspace{3pt}}\\\cline{3-7}
&&\parbox{\wcC}{\vspace{3pt}\noindent
mitochondrial 28s ribosomal protein s32 (s32mt) (mrp-s32) (ptd007) (hspc204). [source:swissprot;acc:q9y6g3]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8906\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
21883\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
2.45711\vspace{3pt}}\\\cline{2-7}
&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
Squared\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
hbs1-like. [source:refseq;acc:nm\_006620]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1596.92\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
115.48\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
13.8285\vspace{3pt}}\\\cline{3-7}
&&\parbox{\wcC}{\vspace{3pt}\noindent
pyridoxine 5'-phosphate oxidase. [source:refseq;acc:nm\_018129]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
2.81207\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
281207\vspace{3pt}}\\\cline{2-7}
&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
hbs1-like. [source:refseq;acc:nm\_006620]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
50.9657\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
26.4292\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.92839\vspace{3pt}}\\\cline{3-7}
&&\parbox{\wcC}{\vspace{3pt}\noindent
pyridoxine 5'-phosphate oxidase. [source:refseq;acc:nm\_018129]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}}&\parbox{\wcF}{\vspace{3pt}\noindent
10.4403\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1044030\vspace{3pt}}\\\cline{1-3}\cline{6-7}
\multirow{8}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
5\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
Measured\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
homeobox protein hox-c6 (hox-3c) (hho.c8) (cp25). [source:swissprot;acc:p09630]\vspace{3pt}}&&&\parbox{\wcF}{\vspace{3pt}\noindent
89\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
8900000\vspace{3pt}}\\\cline{3-7}
&&\parbox{\wcC}{\vspace{3pt}\noindent
junctophilin 3 (junctophilin type 3) (jp-3). [source:swissprot;acc:q8wxh2]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
1153.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
339.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
3.39764\vspace{3pt}}\\\cline{2-3}\cline{5-7}
&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
cytohesin 4. [source:swissprot;acc:q9uia0]\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent
15\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
28\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.86667\vspace{3pt}}\\\cline{3-7}
&&\parbox{\wcC}{\vspace{3pt}\noindent
ubiquitin-like protein smt3b (sentrin 2) (hsmt3). [source:swissprot;acc:p55855]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
5510.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
11965.7\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
2.17144\vspace{3pt}}\\\cline{2-3}\cline{5-7}
&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
Squared\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
homeobox protein hox-c4 (hox-3e) (cp19). [source:swissprot;acc:p09017]\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.87479\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
187479\vspace{3pt}}\\\cline{3-7}
&&\parbox{\wcC}{\vspace{3pt}\noindent
junctophilin 3 (junctophilin type 3) (jp-3). [source:swissprot;acc:q8wxh2]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
314.926\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
27.2805\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
11.544\vspace{3pt}}\\\cline{2-7}
&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
homeobox protein hox-c4 (hox-3e) (cp19). [source:swissprot;acc:p09017]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
9.43398\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
943398\vspace{3pt}}\\\cline{3-7}
&&\parbox{\wcC}{\vspace{3pt}\noindent
junctophilin 3 (junctophilin type 3) (jp-3). [source:swissprot;acc:q8wxh2]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
33.9632\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
18.4255\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.84327\vspace{3pt}}\\\hline
\multirow{8}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
6\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
Measured\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
homeobox protein hox-a4 (hox-1d) (hox-1.4). [source:swissprot;acc:q00056]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
89\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
8900000\vspace{3pt}}\\\cline{3-7}
&&\parbox{\wcC}{\vspace{3pt}\noindent
junctophilin 2 (junctophilin type 2) (jp-2). [source:swissprot;acc:q9br39]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
1153.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
339.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
3.39764\vspace{3pt}}\\\cline{2-3}\cline{5-7}
&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
cytohesin 3 (arf nucleotide-binding site opener 3) (arno3 protein) (general receptor of phosphoinositides 1) (grp1). [source:swissprot;acc:o43739]\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent
15\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
28\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.86667\vspace{3pt}}\\\cline{3-7}
&&\parbox{\wcC}{\vspace{3pt}\noindent
ubiquitin protein ligase. [source:refseq;acc:nm\_130466]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
7523\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
15339.2\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
2.03897\vspace{3pt}}\\\cline{2-3}\cline{5-7}
&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
Squared\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
homeobox protein hox-c6 (hox-3c) (hho.c8) (cp25). [source:swissprot;acc:p09630]\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.87479\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
187479\vspace{3pt}}\\\cline{3-7}
&&\parbox{\wcC}{\vspace{3pt}\noindent
junctophilin 2 (junctophilin type 2) (jp-2). [source:swissprot;acc:q9br39]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
314.926\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
27.2805\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
11.544\vspace{3pt}}\\\cline{2-7}
&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
homeobox protein hox-c6 (hox-3c) (hho.c8) (cp25). [source:swissprot;acc:p09630]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
9.43398\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
943398\vspace{3pt}}\\\cline{3-7}
&&\parbox{\wcC}{\vspace{3pt}\noindent
junctophilin 2 (junctophilin type 2) (jp-2). [source:swissprot;acc:q9br39]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
33.9632\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
18.4255\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.84327\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
7\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
Measured\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
sedlin. [source:swissprot;acc:o14582]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
43\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
4300000\vspace{3pt}}\\\cline{3-7}
&&\parbox{\wcC}{\vspace{3pt}\noindent
sphingomyelin phosphodiesterase 2 (ec 3.1.4.12) (neutral sphingomyelinase) (nsmase) (n-smase) (lyso-platelet activating factor- phospholipase c) (lyso-paf-plc). [source:swissprot;acc:o60906]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1153.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
339.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
3.39764\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/