Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Gene description red green Hugo Rank Value Type Network Comparison Type Interaction Map network_comparison Filtered
Results: HTML CSV LaTeX Showing element 1 to 50 of 3228 in total
Value Type: Ranked
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1
\def\wcA{0.14285714285714\textwidth} \def\wcB{0.14285714285714\textwidth} \def\wcC{0.14285714285714\textwidth} \def\wcD{0.14285714285714\textwidth} \def\wcE{0.14285714285714\textwidth} \def\wcF{0.14285714285714\textwidth} \begin{longtable}{|c|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent Hugo\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent 1,4-alpha-glucan branching enzyme (ec 2.4.1.18) (glycogen branching enzyme) (brancher enzyme). [source:swissprot;acc:q04446]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 185.678\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 245.247\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent GBE1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 18\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.32082\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1-acyl-sn-glycerol-3-phosphate acyltransferase alpha (ec 2.3.1.51) (1- agp acyltransferase 1) (1-agpat 1) (lysophosphatidic acid acyltransferase-alpha) (lpaat-alpha) (1-acylglycerol-3-phosphate o- acyltransferase 1) (g15 protein). [source:swissprot;acc:q99943]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 186.741\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 181.041\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent \vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1038\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.03148\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1-acyl-sn-glycerol-3-phosphate acyltransferase beta (ec 2.3.1.51) (1- agp acyltransferase 2) (1-agpat 2) (lysophosphatidic acid acyltransferase-beta) (lpaat-beta) (1-acylglycerol-3-phosphate o- acyltransferase 2). [source:swissprot;acc:o15120]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 186.664\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 180.943\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent AGPAT2\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1032\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.03162\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1-acyl-sn-glycerol-3-phosphate acyltransferase delta (ec 2.3.1.51) (1- agp acyltransferase 4) (1-agpat 4) (lysophosphatidic acid acyltransferase-delta) (lpaat-delta) (1-acylglycerol-3-phosphate o- acyltransferase 4). [source:swissprot;acc:q9nrz5]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 187.96\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 182.308\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent AGPAT4\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1048\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.031\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma (ec 2.3.1.51) (1- agp acyltransferase 3) (1-agpat 3) (lysophosphatidic acid acyltransferase-gamma) (lpaat-gamma) (1-acylglycerol-3-phosphate o- acyltransferase 3). [source:swissprot;acc:q9nrz7]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 187.834\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 182.137\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent AGPAT3\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1043\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.03128\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta 4 (ec 3.1.4.11) (phosphoinositide phospholipase c) (plc-beta-4) (phospholipase c-beta-4). [source:swissprot;acc:q15147]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent PLCB4\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 3126\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 10 kda heat shock protein, mitochondrial (hsp10) (10 kda chaperonin) (cpn10). [source:swissprot;acc:q04984]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 211.633\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 213.703\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent HSPE1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1963\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.00978\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 10-formyltetrahydrofolate dehydrogenase (ec 1.5.1.6) (10-fthfdh). [source:swissprot;acc:o75891]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent ALDH1L1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2922\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 14-3-3 protein beta/alpha (protein kinase c inhibitor protein-1) (kcip-1) (protein 1054). [source:swissprot;acc:p31946]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 220.681\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 221.425\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent YWHAB\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2439\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.00337\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 14-3-3 protein epsilon (mitochondrial import stimulation factor l subunit) (protein kinase c inhibitor protein-1) (kcip-1) (14-3-3e). [source:swissprot;acc:p42655]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent YWHAE\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 3088\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 14-3-3 protein zeta/delta (protein kinase c inhibitor protein-1) (kcip-1) (factor activating exoenzyme s) (fas). [source:swissprot;acc:p29312]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 220.683\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 221.51\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent YWHAZ\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2396\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.00375\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 14.5 kda translational inhibitor protein (p14.5) (uk114 antigen homolog). [source:swissprot;acc:p52758]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 203.353\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 202.529\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent HRSP12\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2366\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.00407\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 15 kda selenoprotein precursor. [source:swissprot;acc:o60613]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 214.522\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 212.432\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent \vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1948\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.00984\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 15-hydroxyprostaglandin dehydrogenase [nad(+)] (ec 1.1.1.141) (pgdh). [source:swissprot;acc:p15428]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent HPGD\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2855\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 17 beta-hydroxysteroid dehydrogenase. [source:sptrembl;acc:q13034]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 211.449\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 217.998\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent \vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1051\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.03097\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2-hydroxyphytanoyl-coa lyase (ec 4.1.-.-) (2-hpcl) (hspc279). [source:swissprot;acc:q9uj83]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 225.019\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 222.969\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent HACL1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2007\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.00919\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2-oxoglutarate dehydrogenase e1 component, mitochondrial precursor (ec 1.2.4.2) (alpha-ketoglutarate dehydrogenase). [source:swissprot;acc:q02218]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 208.55\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 214.041\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent OGDH\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1160\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02633\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2-oxoisovalerate dehydrogenase alpha subunit, mitochondrial precursor (ec 1.2.4.4) (branched-chain alpha-keto acid dehydrogenase e1 component alpha chain) (bckdh e1-alpha). [source:swissprot;acc:p12694]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 198.927\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 202.726\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent TMEM91\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1484\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.0191\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2-oxoisovalerate dehydrogenase beta subunit, mitochondrial precursor (ec 1.2.4.4) (branched-chain alpha-keto acid dehydrogenase e1 component beta chain) (bckdh e1-beta). [source:swissprot;acc:p21953]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 218.47\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 213.875\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent BCKDHB\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1389\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02148\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 20 kda nuclear cap binding protein (ncbp 20 kda subunit) (cbp20) (ncbp interacting protein 1) (nip1). [source:swissprot;acc:p52298]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 228.306\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 198.011\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent NCBP2\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 183\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.153\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 25-hydroxyvitamin d-1 alpha hydroxylase, mitochondrial precursor (ec 1.14.-.-) (25-ohd-1 alpha-hydroxylase) (25-hydroxyvitamin d3 1- alpha-hydroxylase) (vd3 1a hydroxylase) (p450c1 alpha) (p450vd1- alpha). [source:swissprot;acc:o15528]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent CYP27B1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 3079\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 26s protease regulatory subunit 4 (p26s4). [source:swissprot;acc:q03527]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 215.581\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 216.137\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent PSMC1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2503\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.00258\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 26s protease regulatory subunit 6a (tat-binding protein 1) (tbp-1) (proteasome subunit p50). [source:swissprot;acc:p17980]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 216.64\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 217.285\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent PSMC3\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2474\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.00298\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 26s protease regulatory subunit 6b (mip224) (mb67 interacting protein) (tat-binding protein-7) (tbp-7). [source:swissprot;acc:p43686]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 217.413\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 218.426\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent PSMC4\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2327\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.00466\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 26s protease regulatory subunit 7 (mss1 protein). [source:swissprot;acc:p35998]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 218.192\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 219.014\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent PSMC2\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2395\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.00377\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 26s protease regulatory subunit 8 (proteasome subunit p45) (thyroid hormone receptor interacting protein 1) (trip1) (msug1 protein) (tat-binding protein homolog 10) (tbp10) (p45/sug). [source:swissprot;acc:p47210]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 202.358\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 199.408\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent PSMC5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1637\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.01479\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 26s protease regulatory subunit s10b (proteasome subunit p42) (p44) (conserved atpase domain protein 44) (cadp44). [source:swissprot;acc:q92524]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 216.177\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 216.801\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent PSMC6\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2478\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.00289\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 26s proteasome non-atpase regulatory subunit 1 (26s proteasome regulatory subunit s1) (26s proteasome subunit p112). [source:swissprot;acc:q99460]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 218.555\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 219.434\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent PSMD1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2368\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.00402\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 26s proteasome non-atpase regulatory subunit 10 (26s proteasome regulatory subunit p28) (gankyrin). [source:swissprot;acc:o75832]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 217.419\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 218.627\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent PSMD10\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2269\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.00556\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 26s proteasome non-atpase regulatory subunit 11 (26s proteasome regulatory subunit s9) (26s proteasome regulatory subunit p44.5). [source:swissprot;acc:o00231]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 217.589\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 218.475\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent PSMD11\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2367\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.00407\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 26s proteasome non-atpase regulatory subunit 12 (26s proteasome regulatory subunit p55). [source:swissprot;acc:o00232]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 217.241\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 218.311\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent \vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2316\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.00493\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 26s proteasome non-atpase regulatory subunit 13 (26s proteasome regulatory subunit s11) (26s proteasome regulatory subunit p40.5). [source:swissprot;acc:q9unm6]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 217.112\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 218.116\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent PSMD13\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2329\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.00462\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 26s proteasome non-atpase regulatory subunit 2 (26s proteasome regulatory subunit s2) (26s proteasome subunit p97) (tumor necrosis factor type 1 receptor associated protein 2) (55.11 protein). [source:swissprot;acc:q13200]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 210.209\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 208.808\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent PSMD2\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2175\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.00671\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 26s proteasome non-atpase regulatory subunit 3 (26s proteasome regulatory subunit s3) (proteasome subunit p58). [source:swissprot;acc:o43242]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 217.645\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 218.376\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent PSMD3\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2440\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.00336\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 26s proteasome non-atpase regulatory subunit 4 (26s proteasome regulatory subunit s5a) (rpn10) (multiubiquitin chain binding protein) (antisecretory factor-1) (af) (asf). [source:swissprot;acc:p55036]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 220.987\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 225.468\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent PSMD4\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1432\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02028\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 26s proteasome non-atpase regulatory subunit 6 (26s proteasome regulatory subunit s10) (p42a) (proteasome regulatory particle subunit p44s10). [source:swissprot;acc:q15008]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 215.807\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 216.556\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent PSMD6\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2432\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.00347\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 26s proteasome non-atpase regulatory subunit 7 (26s proteasome regulatory subunit s12) (proteasome subunit p40) (mov34 protein homolog). [source:swissprot;acc:p51665]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 217.232\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 218.162\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent PSMD7\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2355\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.00428\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 26s proteasome non-atpase regulatory subunit 8 (26s proteasome regulatory subunit s14) (p31). [source:swissprot;acc:p48556]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 215.835\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 216.341\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent PSMD8\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2525\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.00234\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 26s proteasome non-atpase regulatory subunit 9 (26s proteasome regulatory subunit p27). [source:swissprot;acc:o00233]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 215.615\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 215.91\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent PSMD9\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2620\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.00137\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 26s proteasome-associated pad1 homolog. [source:refseq;acc:nm\_005805]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 217.871\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 219.366\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent PSMD14\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2150\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.00686\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 27 kda golgi snare protein (golgi snap receptor complex member 2) (membrin). [source:swissprot;acc:o14653]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 212.386\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 221.785\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent GOSR2\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 810\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.04425\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 28s ribosomal protein s12, mitochondrial precursor (mpr-s12) (mt- rps12). [source:swissprot;acc:o15235]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 243.944\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 268.195\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent MRPS12\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 325\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.09941\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 28s ribosomal protein s16, mitochondrial precursor (mrp-s16) (cgi- 132). [source:swissprot;acc:q9y3d3]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 224.411\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 225.854\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent MRPS16\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2212\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.00643\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 28s ribosomal protein s17, mitochondrial precursor (mrp-s17) (hspc011). [source:swissprot;acc:q9y2r5]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 58\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 44\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent MRPS17\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 23\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.31818\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 28s ribosomal protein s18a, mitochondrial precursor (mrp-s18-a) (mrps18a) (mrp-s18-3). [source:swissprot;acc:q9nvs2]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 217.925\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 214.826\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent MRPS18A\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1659\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.01443\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 28s ribosomal protein s26, mitochondrial precursor (mrp-s26) (mrp- s13). [source:swissprot;acc:q9byn8]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 214.893\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 215.108\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent MRPS26\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2675\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.001\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 28s ribosomal protein s9, mitochondrial precursor (mrp-s9). [source:swissprot;acc:p82933]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 239.75\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 260.544\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent MRPS9\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 407\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.08673\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 3 beta-hydroxy-delta 5-c27-steroid oxidoreductase. [source:refseq;acc:nm\_025193]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcB}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent HSD3B7\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 3147\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 1\vspace{3pt}}}\\\cline{1-1}\cline{4-5} \parbox{\wcA}{\vspace{3pt}\noindent 3 beta-hydroxysteroid dehydrogenase (fragments). [source:sptrembl;acc:q9udk8]\vspace{3pt}}&&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent \vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 2756\vspace{3pt}}&\\\cline{1-1}\cline{5-5} \parbox{\wcA}{\vspace{3pt}\noindent 3 beta-hydroxysteroid dehydrogenase/delta 5-->4-isomerase type i (3beta-hsd i) (trophoblast antigen fdo161g) [includes: 3-beta-hydroxy- delta(5)-steroid dehydrogenase (ec 1.1.1.145) (3-beta-hydroxy-5-ene steroid dehydrogenase) (progesterone reductase); steroid delta- isomerase (ec 5.3.3.1) (delta-5-3-ketosteroid isomerase)]. [source:swissprot;acc:p14060]\vspace{3pt}}&&&&\parbox{\wcE}{\vspace{3pt}\noindent 2802\vspace{3pt}}&\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Hugo is the HGNC identifier if it exists
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/