Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Value Type Interaction Map description Network Comparison Type Rank Gene Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 712 to 761 of 3228 in total
Value Type: Measured
Interaction Map: High confidence
Network Comparison Type: Divided
Filtered: 1
\def\wcA{0.16666666666667\textwidth} \def\wcB{0.16666666666667\textwidth} \def\wcC{0.16666666666667\textwidth} \def\wcD{0.16666666666667\textwidth} \def\wcE{0.16666666666667\textwidth} \begin{longtable}{|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent cytochrome p450 4f8 (ec 1.14.14.1) (cypivf8). [source:swissprot;acc:p98187]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1288\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5655.85\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6120.64\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.08218\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent cytohesin 1 (sec7 homolog b2-1). [source:swissprot;acc:q15438]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 221\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 41482.5\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 33356.5\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.24361\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent cytohesin 2 (arf nucleotide-binding site opener) (arno protein) (arf exchange factor). [source:swissprot;acc:q99418]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 222\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent cytohesin 3 (arf nucleotide-binding site opener 3) (arno3 protein) (general receptor of phosphoinositides 1) (grp1). [source:swissprot;acc:o43739]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 224\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent cytohesin 4. [source:swissprot;acc:q9uia0]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 223\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent cytokine-like nuclear factor n-pac. [source:refseq;acc:nm\_032569]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1147\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6281.21\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6837.61\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.08858\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent cytoplasmic antiproteinase 2 (cap2) (cap-2) (protease inhibitor 8) (serpin b8). [source:swissprot;acc:p50452]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2410\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5078.5\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5275.76\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.03884\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent cytoplasmic antiproteinase 3 (cap3) (cap-3) (protease inhibitor 9) (serpin b9). [source:swissprot;acc:p50453]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2404\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent cytoplasmic cysteine conjugate-beta lyase; glutamine-phenylpyruvate aminotransferase. [source:refseq;acc:nm\_004059]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2413\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6956.32\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7223.14\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03836\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent cytoplasmic dynein light chain (t-complex testis-specific protein 1 homolog) (protein cw-1). [source:swissprot;acc:q15763]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 732\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 13241.4\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 11864\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.1161\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent cytoplasmic polyadenylation element binding protein 3. [source:refseq;acc:nm\_014912]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 13\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 398.5\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 1281.5\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 3.21581\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent cytoplasmic polyadenylation element binding protein 4. [source:refseq;acc:nm\_030627]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 12\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent cytoplasmic protein nck1 (nck adaptor protein 1) (sh2/sh3 adaptor protein nck-alpha). [source:swissprot;acc:p16333]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 892\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6784.67\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7475.48\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.10182\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent cytoplasmic protein nck2 (nck adaptor protein 2) (sh2/sh3 adaptor protein nck-beta) (nck-2). [source:swissprot;acc:o43639]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 847\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6776.85\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7485.55\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.10458\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent cytoskeleton related vitamin a responsive protein; glutamate transporter eeac1-associated protein; dermal papilla derived protein 11; putative mapk activating protein pm27. [source:refseq;acc:nm\_006407]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2654\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 7118.22\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7055.43\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0089\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent cytosolic nonspecific dipeptidase (glutamate carboxypeptidase-like protein 1). [source:swissprot;acc:q96kp4]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1285\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6207.57\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6718.7\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.08234\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent d(4) dopamine receptor (d(2c) dopamine receptor). [source:swissprot;acc:p21917]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1880\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6076.66\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6463.12\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0636\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent d-3-phosphoglycerate dehydrogenase (ec 1.1.1.95) (3-pgdh). [source:swissprot;acc:o43175]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1101\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6133.83\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6690.18\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0907\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent dab2 interacting protein; ngap-like protein; doc-2/dab2 interactive protein. [source:refseq;acc:nm\_032552]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 11\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 398.5\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 1281.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 3.21581\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent dachshund homolog isoform a. [source:refseq;acc:nm\_080759]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2847\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent daz associated protein 1 isoform b; deleted in azoospermia associated protein 1. [source:refseq;acc:nm\_018959]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1239\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5654.53\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6132.76\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.08457\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent db83 protein. [source:swissprot;acc:p57088]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 8\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1153.5\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 339.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 3.39764\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent dc11 protein. [source:refseq;acc:nm\_020186]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1908\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6858.84\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7287.27\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06246\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent dc12 protein. [source:refseq;acc:nm\_020187]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2774\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent dead (asp-glu-ala-asp) box polypeptide 31 isoform 1; dead/dexh helicase ddx31. [source:refseq;acc:nm\_022779]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 431\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3849.94\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4431.36\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.15102\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent dead (asp-glu-ala-asp) box polypeptide 39 isoform 1; nuclear rna helicase, decd variant of dead box family. [source:refseq;acc:nm\_005804]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 777\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5874.74\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6533.34\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.11211\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent dead (asp-glu-ala-asp) box polypeptide 47; hqp0256 protein. [source:refseq;acc:nm\_016355]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2284\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5783.73\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6048.91\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.04585\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent dead-box protein 4 (vasa homolog). [source:swissprot;acc:q9nqi0]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 990\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5147.9\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5641.25\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09584\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent dead-box protein abstrakt homolog. [source:swissprot;acc:q9ujv9]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2033\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6101.12\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6449.87\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05716\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent dead-box protein. [source:refseq;acc:nm\_018665]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1064\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5719.01\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6248.6\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0926\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent dead/h (asp-glu-ala-asp/his) box polypeptide 11; dead/h box-11 (chl1-related helicase gene-1); yeast chl1 homolog. [source:refseq;acc:nm\_030655]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2497\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 7002.3\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7192.25\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.02713\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent defender against cell death 1 (dad-1). [source:swissprot;acc:p46966]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2391\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6327.14\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6579.38\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03987\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent deformed epidermal autoregulatory factor 1 homolog (nuclear deaf-1 related transcriptional regulator) (nudr) (suppressin) (zinc finger mynd domain containing protein 5). [source:swissprot;acc:o75398]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2584\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4180.32\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4253.46\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0175\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent dehydrodolichyl diphosphate synthase. [source:refseq;acc:nm\_024887]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1280\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6350.81\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6874.88\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.08252\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent delta 1-pyrroline-5-carboxylate synthetase (p5cs) [includes: glutamate 5-kinase (ec 2.7.2.11) (gamma-glutamyl kinase) (gk); gamma-glutamyl phosphate reductase (gpr) (ec 1.2.1.41) (glutamate-5-semialdehyde dehydrogenase) (glutamyl-gamma-semialdehyde dehydrogenase)]. [source:swissprot;acc:p54886]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1488\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5573.64\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5991.58\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.07499\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent delta(14)-sterol reductase (ec 1.3.1.70) (c-14 sterol reductase) (sterol c14-reductase) (delta14-sr) (transmembrane 7 superfamily member 2) (another new gene 1) (putative sterol reductase sr-1). [source:swissprot;acc:o76062]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2309\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6960.96\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7273.7\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.04493\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent delta-aminolevulinic acid dehydratase (ec 4.2.1.24) (porphobilinogen synthase) (aladh). [source:swissprot;acc:p13716]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1158\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5489.18\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5972.09\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.08797\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent delta-interacting protein a (hepatitis delta antigen interacting protein a). [source:swissprot;acc:q15834]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1410\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6274.62\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6760.78\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.07748\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent delta-sarcoglycan (sg-delta) (35 kda dystrophin-associated glycoprotein) (35dag). [source:swissprot;acc:q92629]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 738\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5768.32\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6434.78\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.11554\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent delta3,5-delta2,4-dienoyl-coa isomerase, mitochondrial precursor (ec 5.3.3.-). [source:swissprot;acc:q13011]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1019\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5791.82\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6340.86\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0948\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent deltex 2. [source:refseq;acc:nm\_020892]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 54\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1618.84\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 2651.88\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.63814\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent deltex homolog 1; hdx-1. [source:refseq;acc:nm\_004416]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 55\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1629.21\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 2662.12\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.63399\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent dendritic cell protein. [source:refseq;acc:nm\_006360]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 715\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6593.17\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7364.55\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.117\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent density-regulated protein (drp) (drp1 protein) (smooth muscle cell associated protein-3) (smap-3). [source:swissprot;acc:o43583]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1589\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3600.99\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 3360.33\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.07162\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent deoxycytidylate deaminase (ec 3.5.4.12) (dcmp deaminase). [source:swissprot;acc:p32321]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2148\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4644.58\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4892.06\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05328\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent deoxyhypusine synthase (ec 2.5.1.46) (dhs). [source:swissprot;acc:p49366]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1493\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6146.36\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6606.21\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.07482\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent deoxyribonuclease ii beta isoform 1 precursor; deoxyribonuclease ii beta; endonuclease dlad. [source:refseq;acc:nm\_021233]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 324\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 28136.5\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 33457.6\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.18912\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial precursor (ec 3.6.1.23) (dutpase) (dutp pyrophosphatase). [source:swissprot;acc:p33316]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 567\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 10264.9\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 9043.51\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.13506\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent destrin (actin-depolymerizing factor) (adf). [source:swissprot;acc:p18282]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1948\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6230.21\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6608.64\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06074\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent developmentally regulated gtp-binding protein 1 (drg 1). [source:swissprot;acc:q9y295]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2762\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/