Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Value Type Interaction Map description Rank Network Comparison Type Gene Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 1308 to 1357 of 3228 in total
Value Type: Measured
Interaction Map: High confidence
Network Comparison Type: Divided
Filtered: 1
\def\wcA{0.16666666666667\textwidth} \def\wcB{0.16666666666667\textwidth} \def\wcC{0.16666666666667\textwidth} \def\wcD{0.16666666666667\textwidth} \def\wcE{0.16666666666667\textwidth} \begin{longtable}{|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent histone h3.4 (h3t) (h3/t) (h3/g). [source:swissprot;acc:q16695]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 598\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3946.32\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4475.47\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.13409\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent histone h4. [source:swissprot;acc:p02304]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2632\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6072.17\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6155.08\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01365\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent histone-lysine n-methyltransferase, h3 lysine-9 specific 1 (ec 2.1.1.43) (histone h3-k9 methyltransferase 1) (h3-k9-hmtase 1) (suppressor of variegation 3-9 homolog 1) (su(var)3-9 homolog 1). [source:swissprot;acc:o43463]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2032\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5060.82\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5350.93\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.05732\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent histone-lysine n-methyltransferase, h3 lysine-9 specific 2 (ec 2.1.1.43) (histone h3-k9 methyltransferase 2) (h3-k9-hmtase 2) (suppressor of variegation 3-9 homolog 2) (su(var)3-9 homolog 2). [source:swissprot;acc:q9h5i1]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2030\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent hiv tat specific factor 1; cofactor required for tat activation of hiv-1 transcription. [source:refseq;acc:nm\_014500]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2563\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5291.65\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5187.78\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.02002\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent hiv-1 rev binding protein 2; rev interacting protein. [source:refseq;acc:nm\_007043]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1212\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4077.89\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4428.28\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.08592\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent hiv-1 rev binding protein-like; rev/rex activation domain binding protein-related. [source:refseq;acc:nm\_006076]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2561\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5291.65\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5187.78\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.02002\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent hiv-1 tat interactive protein 2, 30kda; tat-interacting protein (30kd); hiv-1 tat interactive protein 2, 30 kda; hiv-1 tat interactive protein 2, 30 kd. [source:refseq;acc:nm\_006410]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2635\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 7197.82\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7291.66\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01304\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent hmg2 like. [source:refseq;acc:nm\_145205]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2799\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homeobox prospero-like protein prox1 (prox 1). [source:swissprot;acc:q92786]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2110\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6916.14\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7295.24\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05481\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein barh-like 1. [source:swissprot;acc:q9hbu1]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2565\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 3964.71\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 4042.75\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.01968\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein barh-like 2. [source:swissprot;acc:q9umq3]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2570\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein cux-2 (cut-like 2) (fragment). [source:swissprot;acc:o14529]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 258\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6417.33\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7857.93\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.22449\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein dlx-2. [source:swissprot;acc:q07687]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1051\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 4757.46\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5198.91\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.09279\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein dlx-3. [source:swissprot;acc:o60479]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1054\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein dlx-5. [source:swissprot;acc:p56178]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1052\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein engrailed-2 (hu-en-2). [source:swissprot;acc:p19622]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1143\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6281.21\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6837.61\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.08858\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein hlx1 (homeobox protein hb24). [source:swissprot;acc:q14774]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 3\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 2597.5\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 698.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 3.71868\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein hox-a10 (hox-1h) (hox-1.8) (pl). [source:swissprot;acc:p31260]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 573\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6739.43\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7644.55\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.1343\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein hox-a4 (hox-1d) (hox-1.4). [source:swissprot;acc:q00056]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 344\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 20446.1\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 24136.4\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.18049\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein hox-a5 (hox-1c). [source:swissprot;acc:p20719]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 343\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein hox-a9 (hox-1g). [source:swissprot;acc:p31269]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 575\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6739.63\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7644.59\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.13427\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein hox-b4 (hox-2f) (hox-2.6). [source:swissprot;acc:p17483]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 338\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 20446.1\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 24136.4\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.18049\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein hox-b5 (hox-2a) (hho.c10) (hu-1). [source:swissprot;acc:p09067]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 342\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein hox-b9 (hox-2e) (hox-2.5). [source:swissprot;acc:p17482]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 574\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6739.61\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7644.58\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.13428\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein hox-c4 (hox-3e) (cp19). [source:swissprot;acc:p09017]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 337\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 20446.1\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 24136.4\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.18049\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein hox-c5 (hox-3d) (cp11). [source:swissprot;acc:q00444]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 339\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein hox-c6 (hox-3c) (hho.c8) (cp25). [source:swissprot;acc:p09630]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 340\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein hox-c9 (hox-3b). [source:swissprot;acc:p31274]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 576\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6739.7\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7644.6\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.13426\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein hox-d4 (hox-4b) (hox-5.1) (hho.c13). [source:swissprot;acc:p09016]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 341\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 20446.1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 24136.4\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.18049\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein hox-d9 (hox-4c) (hox-5.2). [source:swissprot;acc:p28356]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 591\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6740.5\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7644.76\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.13415\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein meis1. [source:swissprot;acc:o00470]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2469\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 7765.3\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 8004\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.03074\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein meis2 (meis1-related protein 1). [source:swissprot;acc:o14770]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2470\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein meis3 (meis1-related protein 2) (fragment). [source:swissprot;acc:q99687]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2474\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein nkx-6.1. [source:swissprot;acc:p78426]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2859\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein otx1. [source:swissprot;acc:p32242]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2399\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5691.1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5913.92\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03915\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein otx2. [source:swissprot;acc:p32243]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2395\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5682\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5905.08\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03926\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein prh (hematopoietically expressed homeobox) (homeobox protein hex). [source:swissprot;acc:q03014]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2454\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 8751.01\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 8480.03\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03196\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein six1 (sine oculis homeobox homolog 1). [source:swissprot;acc:q15475]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1704\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5778.4\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6176.13\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06883\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homeobox protein six2 (sine oculis homeobox homolog 2). [source:swissprot;acc:q9npc8]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1709\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5775.55\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6171.79\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06861\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homer, neuronal immediate early gene, 1b. [source:refseq;acc:nm\_004272]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 245\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4251.65\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5212.33\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.22595\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homer, neuronal immediate early gene, 2; homer homolog 3 (drosophila). [source:refseq;acc:nm\_004839]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 243\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4246.95\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5208.98\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.22652\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homer, neuronal immediate early gene, 3. [source:refseq;acc:nm\_004838]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 246\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4252.66\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5213.05\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.22583\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein (methyl methanesulfonate (mmf)-inducible fragment protein 1). [source:swissprot;acc:q15011]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 3196\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent homogentisate 1,2-dioxygenase (ec 1.13.11.5) (homogentisicase) (homogentisate oxygenase) (homogentisic acid oxidase). [source:swissprot;acc:q93099]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 3053\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent homolog of yeast maf1. [source:refseq;acc:nm\_032272]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1097\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6133.83\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6690.18\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0907\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent hormone sensitive lipase (ec 3.1.1.-) (hsl). [source:swissprot;acc:q05469]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 3172\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent hpaii tiny fragments locus 9c. [source:refseq;acc:nm\_022727]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2746\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4188.5\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4194.22\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00137\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent hrd1 protein isoform a; synoviolin1. [source:refseq;acc:nm\_032431]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1812\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5514.19\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5871.64\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06482\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent hsgcn1 (fragment). [source:sptrembl;acc:q99736]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1424\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5628.53\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6063.61\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0773\vspace{3pt}}\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/