Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 1001 to 1050 of 3228 in total
Value Type: Measured
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1
\def\wcA{0.16666666666667\textwidth} \def\wcB{0.16666666666667\textwidth} \def\wcC{0.16666666666667\textwidth} \def\wcD{0.16666666666667\textwidth} \def\wcE{0.16666666666667\textwidth} \begin{longtable}{|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent 1001\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent lysosomal acid lipase/cholesteryl ester hydrolase precursor (ec 3.1.1.13) (lal) (acid cholesteryl ester hydrolase) (sterol esterase) (lipase a) (cholesteryl esterase). [source:swissprot;acc:p38571]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5680.76\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 6220.45\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.095\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1002\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent seryl-trna synthetase, mitochondrial precursor (ec 6.1.1.11) (serine--trna ligase) (serrsmt). [source:swissprot;acc:q9np81]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1003\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent seryl-trna synthetase (ec 6.1.1.11) (serine--trna ligase) (serrs). [source:swissprot;acc:p49591]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1004\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent o-sialoglycoprotein endopeptidase. [source:refseq;acc:nm\_017807]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5391.64\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5903.72\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09498\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1005\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent annexin a7 (annexin vii) (synexin). [source:swissprot;acc:p20073]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5780.34\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6329.3\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09497\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1006\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent peripheral plasma membrane protein cask (ec 2.7.1.-) (hcask) (calcium/calmodulin-dependent serine protein kinase) (lin-2 homolog). [source:swissprot;acc:o14936]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5707.73\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 6249.1\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.09485\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1007\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent hypoxia-inducible factor-3 alpha isoform a; inhibitory pas domain protein. [source:refseq;acc:nm\_152794]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1008\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent single-minded homolog 1. [source:swissprot;acc:p81133]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1009\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent synapsin iii. [source:swissprot;acc:o14994]\vspace{3pt}}&\multirow{13}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5791.82\vspace{3pt}}}&\multirow{13}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 6340.86\vspace{3pt}}}&\multirow{13}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.0948\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1010\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent aspartate beta-hydroxylase isoform b; junctin isoform 1; junctate; aspartyl/asparaginyl-beta-hydroxylase; peptide-aspartate beta-dioxygenase; humbug. [source:refseq;acc:nm\_032468]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1011\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent hairy/enhancer-of-split related with yrpw motif 1 (hairy and enhancer of split related-1) (hesr-1) (cardiovascular helix-loop-helix factor 2) (hes-related repressor protein 2 herp2). [source:swissprot;acc:q9y5j3]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1012\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent actin binding lim protein 2. [source:refseq;acc:nm\_032432]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1013\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent hairy/enhancer-of-split related with yrpw motif-like. [source:refseq;acc:nm\_014571]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1014\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent synapsin ii. [source:swissprot;acc:q92777]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1015\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent mitochondrial ribosome recycling factor. [source:refseq;acc:nm\_138777]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1016\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent peroxisomal targeting signal 1 receptor (peroxismore receptor 1) (peroxisomal c-terminal targeting signal import receptor) (pts1-bp) (peroxin-5) (pts1 receptor). [source:swissprot;acc:p50542]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1017\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent hairy/enhancer-of-split related with yrpw motif 2; gridlock; hes-related repressor protein 1. [source:refseq;acc:nm\_012259]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1018\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent transcription factor hes-1 (hairy and enhancer of split 1) (hairy- like) (hhl) (hairy homolog). [source:swissprot;acc:q14469]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1019\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent delta3,5-delta2,4-dienoyl-coa isomerase, mitochondrial precursor (ec 5.3.3.-). [source:swissprot;acc:q13011]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1020\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent actin-binding lim protein 1 isoform a; lim actin-binding protein 1; limatin; actin-binding lim protein. [source:refseq;acc:nm\_002313]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1021\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent synapsin i (brain protein 4.1). [source:swissprot;acc:p17600]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1022\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent protein kinase clk2 (ec 2.7.1.-) (cdc-like kinase 2). [source:swissprot;acc:p49760]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6435.94\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7045.75\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09475\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1023\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent protein kinase clk3 (ec 2.7.1.-) (cdc-like kinase 3). [source:swissprot;acc:p49761]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6435.02\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7044.65\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09474\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1024\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent cysteine-rich protein 1 (cysteine-rich intestinal protein) (crip) (cysteine-rich heart protein) (hcrhp). [source:swissprot;acc:p50238]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5706.5\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6245.55\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09446\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1025\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent phosphomannomutase 2 (ec 5.4.2.8) (pmm 2). [source:swissprot;acc:o15305]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5511.96\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6031.95\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09434\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1026\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent phosphomannomutase 1 (ec 5.4.2.8) (pmm 1) (pmmh-22). [source:swissprot;acc:q92871]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5509.89\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6029.29\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09427\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1027\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent s-adenosylmethionine synthetase gamma form (ec 2.5.1.6) (methionine adenosyltransferase) (adomet synthetase) (mat-ii). [source:swissprot;acc:p31153]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6123.15\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6700.05\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09422\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1028\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent nicotinate-nucleotide pyrophosphorylase [carboxylating] (ec 2.4.2.19) (quinolinate phosphoribosyltransferase [decarboxylating]) (qaprtase) (qprtase). [source:swissprot;acc:q15274]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5704\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6241.36\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09421\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1029\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent beta-catenin (pro2286). [source:swissprot;acc:p35222]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5635.26\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6166.09\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0942\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1030\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent casein kinase i, epsilon isoform (ec 2.7.1.-) (cki-epsilon) (ckie). [source:swissprot;acc:p49674]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5048.33\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5523.85\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09419\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1031\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent membrane protein expressed in epithelial-like lung adenocarcinoma. [source:refseq;acc:nm\_024792]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6136.99\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6714.98\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.09418\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1032\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ran binding protein 11. [source:refseq;acc:nm\_016338]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6138.91\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6717.05\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1033\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent fructose-1,6-bisphosphatase isozyme 2 (ec 3.1.3.11) (d-fructose-1,6- bisphosphate 1-phosphohydrolase) (fbpase). [source:swissprot;acc:o00757]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6080.91\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6653.52\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09417\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1034\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent s-adenosylmethionine synthetase alpha and beta forms (ec 2.5.1.6) (methionine adenosyltransferase) (adomet synthetase) (mat-i/iii). [source:swissprot;acc:q00266]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6152.88\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6732.12\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09414\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1035\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent casein kinase i, delta isoform (ec 2.7.1.-) (cki-delta) (ckid). [source:swissprot;acc:p48730]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5054.73\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5530.23\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09407\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1036\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent fructose-1,6-bisphosphatase (ec 3.1.3.11) (d-fructose-1,6-bisphosphate 1-phosphohydrolase) (fbpase). [source:swissprot;acc:p09467]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6077.65\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6649.22\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09404\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1037\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent monoglyceride lipase; lysophospholipase-like. [source:refseq;acc:nm\_007283]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6544.26\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7159.43\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.094\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1038\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent myb proto-oncogene protein (c-myb). [source:swissprot;acc:p10242]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5417.95\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5924.41\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09348\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1039\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent myb-related protein b (b-myb). [source:swissprot;acc:p10244]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5418.92\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5923.09\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09304\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1040\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent rna-binding region containing protein 2 (hepatocellular carcinoma protein 1) (splicing factor hcc1). [source:swissprot;acc:q14498]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5421.93\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5926.08\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09298\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1041\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent myb-related protein a (a-myb). [source:swissprot;acc:p10243]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5419.18\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5922.84\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09294\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1042\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent similar to lim domain only 7 (fragment). [source:sptrembl;acc:q8n6m2]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5887.52\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6434.32\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09287\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1043\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 15 kda selenoprotein precursor. [source:swissprot;acc:o60613]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6344.41\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6933.36\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09283\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1044\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent mbd2 (methyl-cpg-binding protein)-interacting zinc finger protein. [source:refseq;acc:nm\_015517]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4757.46\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5198.91\vspace{3pt}}&\multirow{7}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.09279\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1045\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent immature colon carcinoma transcript 1 (digestion substraction 1) (ds- 1). [source:swissprot;acc:q14197]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5364.32\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5862.09\vspace{3pt}}&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1046\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent skeletal muscle tropomodulin (sk-tmod) (tropomodulin 4). [source:swissprot;acc:q9nzq9]\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 4757.46\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5198.91\vspace{3pt}}}&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1047\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ubiquitous tropomodulin (u-tmod) (tropomodulin 3). [source:swissprot;acc:q9nyl9]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1048\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent tropomodulin 1 (erythrocyte tropomodulin) (e-tmod). [source:swissprot;acc:p28289]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1049\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent sorting nexin 9 (sh3 and px domain-containing protein 1) (sdp1 protein). [source:swissprot;acc:q9y5x1]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1050\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent neuronal tropomodulin (n-tmod) (tropomodulin 2). [source:swissprot;acc:q9nzr1]\vspace{3pt}}&&&\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/