Scientific

MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


Navigation/Query Panel:
Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 1051 to 1100 of 9634 in total 
Value Type: Measured
Network Comparison Type: Divided

\def\wcA{0.125\textwidth}
\def\wcB{0.125\textwidth}
\def\wcC{0.125\textwidth}
\def\wcD{0.125\textwidth}
\def\wcE{0.125\textwidth}
\def\wcF{0.125\textwidth}
\def\wcG{0.125\textwidth}
\begin{longtable}{|c|c|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Interaction Map\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
Filtered\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
263\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
trs85 homolog. [source:swissprot;acc:q9y2l5]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
24896.4\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
20431.7\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.21852\vspace{3pt}}\\\cline{2-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 62; likely ortholog of mouse zinc finger protein 62. [source:refseq;acc:nm\_152283]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
2352.8\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1969.78\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.19445\vspace{3pt}}\\\hline
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
264\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
cop9 constitutive photomorphogenic homolog subunit 3; cop9 complex subunit 3; jab1-containing signalosome subunit 3. [source:refseq;acc:nm\_003653]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
4987.58\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
4094.57\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.2181\vspace{3pt}}\\\cline{2-3}\cline{5-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
diacylglycerol kinase, theta (ec 2.7.1.107) (diglyceride kinase) (dgk- theta) (dag kinase theta). [source:swissprot;acc:p52824]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&&\parbox{\wcE}{\vspace{3pt}\noindent
6396.44\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
6786.96\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.06105\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
pr-domain zinc finger protein 9. [source:swissprot;acc:q9nqv7]\vspace{3pt}}&&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
2352.69\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1969.68\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.19445\vspace{3pt}}\\\cline{2-3}\cline{5-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
sodium/potassium-transporting atpase alpha-2 chain precursor (ec 3.6.3.9) (sodium pump 2) (na+/k+ atpase 2). [source:swissprot;acc:p50993]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&&\parbox{\wcE}{\vspace{3pt}\noindent
3336.48\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
2957.12\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.12829\vspace{3pt}}\\\cline{1-2}\cline{5-7}
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
265\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
60s ribosomal protein l9. [source:swissprot;acc:p32969]\vspace{3pt}}&&&\parbox{\wcE}{\vspace{3pt}\noindent
1685.44\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1894.01\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.12375\vspace{3pt}}\\\cline{2-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
synaptojanin 2 (ec 3.1.3.36) (synaptic inositol-1,4,5-trisphosphate 5- phosphatase 2) (fragment). [source:swissprot;acc:o15056]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
8081.02\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
8573.8\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.06098\vspace{3pt}}\\\cline{2-3}\cline{5-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
wd-repeat protein wdc146. [source:swissprot;acc:q9c0j8]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent
24806.9\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
20369.9\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.21782\vspace{3pt}}\\\cline{2-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 221. [source:swissprot;acc:q9uk13]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
2352.64\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1969.64\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.19445\vspace{3pt}}\\\cline{1-3}\cline{5-7}
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
266\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
aldehyde dehydrogenase 8 (ec 1.2.1.5). [source:swissprot;acc:p48448]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent
1475.05\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1312.91\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.1235\vspace{3pt}}\\\cline{2-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
carboxypeptidase a1 precursor (ec 3.4.17.1). [source:swissprot;acc:p15085]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
8817.03\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
9353.9\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.06089\vspace{3pt}}\\\cline{2-3}\cline{5-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
cleavage and polyadenylation specificity factor, 160 kda subunit (cpsf 160 kda subunit). [source:swissprot;acc:q10570]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent
24806.9\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
20369.9\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.21782\vspace{3pt}}\\\cline{2-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 73 (zinc finger protein 186) (hznf2). [source:swissprot;acc:o43830]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
2353\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1969.96\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.19444\vspace{3pt}}\\\cline{1-2}\cline{4-7}
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
267\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
choline/ethanolaminephosphotransferase. [source:refseq;acc:nm\_006090]\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
8813.83\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
9348.71\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.06069\vspace{3pt}}\\\cline{2-3}\cline{5-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
ral guanine nucleotide dissociation stimulator (ralgef) (ralgds). [source:swissprot;acc:q12967]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&&\parbox{\wcE}{\vspace{3pt}\noindent
14021.4\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
11523\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.21682\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
uncharacterized bone marrow protein bm033. [source:refseq;acc:nm\_018452]\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
1475.05\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1312.91\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.1235\vspace{3pt}}\\\cline{2-3}\cline{5-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 354a (transcription factor 17) (zinc finger protein eznf). [source:swissprot;acc:o60765]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent
2352.95\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1969.92\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.19444\vspace{3pt}}\\\hline
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
268\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
cleavage and polyadenylation specificity factor, 100 kda subunit (cpsf 100 kda subunit) (fragment). [source:swissprot;acc:q9p2i0]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
24473.9\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
20127.8\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.21593\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
far upstream element-binding protein; far upstream element binding protein; fuse-binding protein. [source:refseq;acc:nm\_003902]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
604.529\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
538.094\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.12346\vspace{3pt}}\\\cline{2-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
reversion-inducing cysteine-rich protein with kazal motifs precursor (hreck) (suppressor of tumorigenicity 15) (st15). [source:swissprot;acc:o95980]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8813.83\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
9348.71\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.06069\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 155. [source:swissprot;acc:q12901]\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
2352.95\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1969.92\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.19444\vspace{3pt}}\\\cline{1-3}\cline{5-7}
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
269\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
60s ribosomal protein l10 (qm protein) (tumor suppressor qm) (laminin receptor homolog). [source:swissprot;acc:p27635]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent
1217.92\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1367.83\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.12309\vspace{3pt}}\\\cline{2-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
choline phosphotransferase 1; cholinephosphotransferase 1 alpha; cholinephosphotransferase 1. [source:refseq;acc:nm\_020244]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
8813.95\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
9348.9\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.06069\vspace{3pt}}\\\cline{2-3}\cline{5-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
u6 snrna-associated sm-like protein lsm8. [source:swissprot;acc:o95777]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent
4590.18\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
5575.52\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.21466\vspace{3pt}}\\\cline{2-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 2. [source:refseq;acc:nm\_021088]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
2353.11\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1970.07\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.19443\vspace{3pt}}\\\cline{1-2}\cline{4-7}
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
270\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
carboxypeptidase a5. [source:refseq;acc:nm\_080385]\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
8811.88\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
9345.51\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.06056\vspace{3pt}}\\\cline{2-3}\cline{5-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
fip1-like 1; rearranged in hypereosinophilia. [source:refseq;acc:nm\_030917]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&&\parbox{\wcE}{\vspace{3pt}\noindent
23640.2\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
19479.8\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.21358\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
ribosomal protein l10-like protein. [source:refseq;acc:nm\_080746]\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
1217.96\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1367.88\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.12309\vspace{3pt}}\\\cline{2-3}\cline{5-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 19 (zinc finger protein kox12) (fragment). [source:swissprot;acc:p17023]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&&\parbox{\wcE}{\vspace{3pt}\noindent
2353.04\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1970.01\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.19443\vspace{3pt}}\\\cline{1-2}\cline{4-7}
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
271\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
carboxypeptidase b precursor (ec 3.4.17.2) (pancreas-specific protein) (pasp). [source:swissprot;acc:p15086]\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
8811.69\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
9345.26\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.06055\vspace{3pt}}\\\cline{2-3}\cline{5-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
chromatin accessibility complex protein 1 (chrac-1) (chrac-15) (huchrac15) (dna polymerase epsilon subunit p15). [source:swissprot;acc:q9nrg0]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&&\parbox{\wcE}{\vspace{3pt}\noindent
2554.89\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
3093.78\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.21092\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
histone h4. [source:swissprot;acc:p02304]\vspace{3pt}}&&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
21773.1\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
24446.3\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.12278\vspace{3pt}}\\\cline{2-3}\cline{5-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein zfp-36 (fragment). [source:swissprot;acc:p16415]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent
2353.27\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1970.21\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.19443\vspace{3pt}}\\\cline{1-3}\cline{5-7}
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
272\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
60s ribosomal protein l15. [source:swissprot;acc:p39030]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent
846.216\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
753.793\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.12261\vspace{3pt}}\\\cline{2-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial precursor (ec 1.5.1.12) (p5c dehydrogenase). [source:swissprot;acc:p30038]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
11162\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
10526.2\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.0604\vspace{3pt}}\\\cline{2-3}\cline{5-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
histone acetyltransferase type b catalytic subunit (ec 2.3.1.48). [source:swissprot;acc:o14929]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent
3858.52\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
4669.27\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.21012\vspace{3pt}}\\\cline{2-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 134. [source:swissprot;acc:p52741]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
2353.38\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1970.32\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.19442\vspace{3pt}}\\\hline
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
273\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
eukaryotic translation initiation factor 5 (eif-5). [source:swissprot;acc:p55010]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
3199.4\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
3870.8\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.20985\vspace{3pt}}\\\cline{2-3}\cline{5-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
phospholipase a-2-activating protein (plap) (pla2p). [source:swissprot;acc:q9y263]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent
11162\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
10526.2\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.0604\vspace{3pt}}\\\cline{2-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
sorcin (22 kda protein) (cp-22) (v19). [source:swissprot;acc:p30626]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
1410.81\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1582.65\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.1218\vspace{3pt}}\\\cline{2-3}\cline{5-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 337. [source:swissprot;acc:q9y3m9]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent
2353.42\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1970.36\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.19441\vspace{3pt}}\\\cline{1-3}\cline{5-7}
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
274\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
brain protein 16. [source:refseq;acc:nm\_016458]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&&\parbox{\wcE}{\vspace{3pt}\noindent
2155.75\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
2418.14\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.12172\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
chromosome 3p21.1 gene sequence. [source:refseq;acc:nm\_013286]\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
3119.98\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
2579.49\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.20953\vspace{3pt}}\\\cline{2-3}\cline{5-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
small nuclear ribonucleoprotein f (snrnp-f) (sm protein f) (sm-f) (smf). [source:swissprot;acc:q15356]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&&\parbox{\wcE}{\vspace{3pt}\noindent
7718.85\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
8184.75\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.06036\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 358. [source:swissprot;acc:q9nw07]\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
2353.63\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1970.55\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcG}{\vspace{3pt}\noindent
1.1944\vspace{3pt}}}\\\cline{1-2}\cline{5-6}
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
275\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
novel c2h2 type zinc finger protein. [source:refseq;acc:nm\_024325]\vspace{3pt}}&&&\parbox{\wcE}{\vspace{3pt}\noindent
2353.74\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1970.65\vspace{3pt}}&\\\cline{2-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
regulator of g-protein signaling 19 (rgs19) (g-alpha interacting protein) (gaip protein). [source:swissprot;acc:p49795]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
3119.98\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
2579.49\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.20953\vspace{3pt}}\\\cline{2-2}\cline{4-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
swi/snf-related matrix-associated actin-dependent regulator of chromatin c2 isoform a; mammalian chromatin remodeling complex brg1-associated factor 170; chromatin remodeling complex baf170 subunit; swi3-like protein; swi/snf complex 170 kda subunit. [source:refseq;acc:nm\_003075]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
717.401\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
804.725\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.12172\vspace{3pt}}\\\cline{2-7}
&\parbox{\wcB}{\vspace{3pt}\noindent
udp-glucose 4-epimerase (ec 5.1.3.2) (galactowaldenase) (udp- galactose 4-epimerase). [source:swissprot;acc:q14376]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
7506.19\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
7958.12\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent
1.06021\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/