Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Gene Rank description Network Comparison Type Value Type Interaction Map Filtered green red network_comparison
Results: HTML CSV LaTeX Showing element 1 to 50 of 25824 in total
Interaction Map: High confidence
Filtered: 1
\def\wcA{0.125\textwidth} \def\wcB{0.125\textwidth} \def\wcC{0.125\textwidth} \def\wcD{0.125\textwidth} \def\wcE{0.125\textwidth} \def\wcF{0.125\textwidth} \def\wcG{0.125\textwidth} \begin{longtable}{|c|c|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Network Comparison Type\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent Value Type\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \multirow{8}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent homeobox protein hlx1 (homeobox protein hb24). [source:swissprot;acc:q14774]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent Ranked\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 322\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 215\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 107\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent mannosyl-oligosaccharide 1,2-alpha-mannosidase ib (ec 3.2.1.113) (processing alpha-1,2-mannosidase ib) (alpha-1,2-mannosidase ib) (mannosidase alpha class 1a member 2). [source:swissprot;acc:o60476]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent Measured\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 33356.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 41482.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 8126\vspace{3pt}}\\\cline{2-7} &\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent putative glialblastoma cell differentiation-related; putative glialblastoma cell differentiation-related protein. [source:refseq;acc:nm\_016172]\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent Ranked\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 24\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 10\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 2.4\vspace{3pt}}\\\cline{3-7} &&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent Squared\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 322755\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 468498\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 145743\vspace{3pt}}\\\cline{2-7} &\multirow{4}{*}{\parbox{\wcB}{\vspace{3pt}\noindent rad50-interacting protein 1. [source:refseq;acc:nm\_021930]\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent Measured\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2394.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 450.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 5.31521\vspace{3pt}}\\\cline{4-7} &&&\parbox{\wcD}{\vspace{3pt}\noindent Squared\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1357.07\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 48.0356\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 28.2513\vspace{3pt}}\\\cline{4-7} &&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent Rooted\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 48.9336\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 21.225\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent 2.30547\vspace{3pt}}\\\cline{3-3}\cline{7-7} &&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&&&&\parbox{\wcG}{\vspace{3pt}\noindent 27.7086\vspace{3pt}}\\\cline{1-2}\cline{4-7} \multirow{8}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 2\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent cytohesin 1 (sec7 homolog b2-1). [source:swissprot;acc:q15438]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent Measured\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 33356.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 41482.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 8126\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent hbs1-like. [source:refseq;acc:nm\_006620]\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent Ranked\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 322\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 215\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 107\vspace{3pt}}\\\cline{2-3}\cline{5-7} &\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent mannosyl-oligosaccharide 1,2-alpha-mannosidase ib (ec 3.2.1.113) (processing alpha-1,2-mannosidase ib) (alpha-1,2-mannosidase ib) (mannosidase alpha class 1a member 2). [source:swissprot;acc:o60476]\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent 28\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 15\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 1.86667\vspace{3pt}}\\\cline{3-7} &&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent Squared\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 263351\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 407289\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 143938\vspace{3pt}}\\\cline{2-7} &\multirow{4}{*}{\parbox{\wcB}{\vspace{3pt}\noindent rho-related btb domain-containing protein 2 (deleted in breast cancer 2 gene protein) (p83). [source:swissprot;acc:q9byz6]\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent Measured\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2394.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 450.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 5.31521\vspace{3pt}}\\\cline{4-7} &&&\parbox{\wcD}{\vspace{3pt}\noindent Squared\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1357.07\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 48.0356\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 28.2513\vspace{3pt}}\\\cline{4-7} &&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent Rooted\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 48.9336\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 21.225\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent 2.30547\vspace{3pt}}\\\cline{3-3}\cline{7-7} &&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&&&&\parbox{\wcG}{\vspace{3pt}\noindent 27.7086\vspace{3pt}}\\\hline \multirow{8}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 3\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent cytohesin 1 (sec7 homolog b2-1). [source:swissprot;acc:q15438]\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent Ranked\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 28\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 15\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 1.86667\vspace{3pt}}\\\cline{3-7} &&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent Squared\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 263351\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 407289\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 143938\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent cytohesin 2 (arf nucleotide-binding site opener) (arno protein) (arf exchange factor). [source:swissprot;acc:q99418]\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent Measured\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 33356.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 41482.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 8126\vspace{3pt}}\\\cline{2-3}\cline{5-7} &\multirow{4}{*}{\parbox{\wcB}{\vspace{3pt}\noindent homeobox protein hlx1 (homeobox protein hb24). [source:swissprot;acc:q14774]\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&&\parbox{\wcE}{\vspace{3pt}\noindent 698.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2597.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 3.71868\vspace{3pt}}\\\cline{4-7} &&&\parbox{\wcD}{\vspace{3pt}\noindent Squared\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 115.48\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1596.92\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 13.8285\vspace{3pt}}\\\cline{4-7} &&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent Rooted\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 26.4292\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 50.9657\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent 1.92839\vspace{3pt}}\\\cline{3-3}\cline{7-7} &&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&&&&\parbox{\wcG}{\vspace{3pt}\noindent 24.5365\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent rad50-interacting protein 1. [source:refseq;acc:nm\_021930]\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent Ranked\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 232\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 337\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 105\vspace{3pt}}\\\cline{1-3}\cline{5-7} \multirow{8}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 4\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent cytohesin 2 (arf nucleotide-binding site opener) (arno protein) (arf exchange factor). [source:swissprot;acc:q99418]\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent 28\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 15\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 1.86667\vspace{3pt}}\\\cline{3-7} &&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent Squared\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 263351\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 407289\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 143938\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent cytohesin 4. [source:swissprot;acc:q9uia0]\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent Measured\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 33356.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 41482.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 8126\vspace{3pt}}\\\cline{2-3}\cline{5-7} &\multirow{4}{*}{\parbox{\wcB}{\vspace{3pt}\noindent hbs1-like. [source:refseq;acc:nm\_006620]\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&&\parbox{\wcE}{\vspace{3pt}\noindent 698.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2597.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 3.71868\vspace{3pt}}\\\cline{4-7} &&&\parbox{\wcD}{\vspace{3pt}\noindent Squared\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 115.48\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1596.92\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 13.8285\vspace{3pt}}\\\cline{4-7} &&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent Rooted\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 26.4292\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 50.9657\vspace{3pt}}}&\parbox{\wcG}{\vspace{3pt}\noindent 1.92839\vspace{3pt}}\\\cline{3-3}\cline{7-7} &&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&&&&\parbox{\wcG}{\vspace{3pt}\noindent 24.5365\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent rho-related btb domain-containing protein 2 (deleted in breast cancer 2 gene protein) (p83). [source:swissprot;acc:q9byz6]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent Ranked\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 232\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 337\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 105\vspace{3pt}}\\\cline{1-2}\cline{4-7} \multirow{8}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 5\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent 28s ribosomal protein s17, mitochondrial precursor (mrp-s17) (hspc011). [source:swissprot;acc:q9y2r5]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent Rooted\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 168.796\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 145.551\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 23.245\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent cytohesin 3 (arf nucleotide-binding site opener 3) (arno3 protein) (general receptor of phosphoinositides 1) (grp1). [source:swissprot;acc:o43739]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent Measured\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 33356.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 41482.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 8126\vspace{3pt}}\\\cline{2-7} &\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent cytohesin 4. [source:swissprot;acc:q9uia0]\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent Ranked\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 28\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 15\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 1.86667\vspace{3pt}}\\\cline{3-7} &&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent Squared\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 263351\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 407289\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 143938\vspace{3pt}}\\\cline{2-7} &\multirow{3}{*}{\parbox{\wcB}{\vspace{3pt}\noindent junctophilin 3 (junctophilin type 3) (jp-3). [source:swissprot;acc:q8wxh2]\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent Measured\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 339.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1153.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 3.39764\vspace{3pt}}\\\cline{4-7} &&&\parbox{\wcD}{\vspace{3pt}\noindent Squared\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 27.2805\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 314.926\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 11.544\vspace{3pt}}\\\cline{4-7} &&&\parbox{\wcD}{\vspace{3pt}\noindent Rooted\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 18.4255\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 33.9632\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 1.84327\vspace{3pt}}\\\cline{2-7} &\parbox{\wcB}{\vspace{3pt}\noindent xpa binding protein 1; mbd2 interactor protein; putative atp(gtp)-binding protein. [source:refseq;acc:nm\_007266]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent Ranked\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 309\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 212\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 97\vspace{3pt}}\\\cline{1-3}\cline{5-7} \multirow{8}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 6\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent cytohesin 3 (arf nucleotide-binding site opener 3) (arno3 protein) (general receptor of phosphoinositides 1) (grp1). [source:swissprot;acc:o43739]\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent 28\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 15\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 1.86667\vspace{3pt}}\\\cline{3-7} &&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent Squared\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 263351\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 407289\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 143938\vspace{3pt}}\\\cline{2-7} &\multirow{3}{*}{\parbox{\wcB}{\vspace{3pt}\noindent junctophilin 2 (junctophilin type 2) (jp-2). [source:swissprot;acc:q9br39]\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent Measured\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 339.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1153.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 3.39764\vspace{3pt}}\\\cline{4-7} &&&\parbox{\wcD}{\vspace{3pt}\noindent Squared\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 27.2805\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 314.926\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 11.544\vspace{3pt}}\\\cline{4-7} &&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent Rooted\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 18.4255\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 33.9632\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 1.84327\vspace{3pt}}\\\cline{2-3}\cline{5-7} &\parbox{\wcB}{\vspace{3pt}\noindent pantothenate kinase 1 (ec 2.7.1.33) (pantothenic acid kinase 1) (hpank1) (hpank). [source:swissprot;acc:q8te04]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&&\parbox{\wcE}{\vspace{3pt}\noindent 168.796\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 145.551\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 23.245\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent protein x 0004. [source:refseq;acc:nm\_016301]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent Ranked\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 309\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 212\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 97\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent putative glialblastoma cell differentiation-related; putative glialblastoma cell differentiation-related protein. [source:refseq;acc:nm\_016172]\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent Measured\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 36927.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 44490.5\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 7563\vspace{3pt}}\\\cline{1-2}\cline{5-7} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 7\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent 28s ribosomal protein s17, mitochondrial precursor (mrp-s17) (hspc011). [source:swissprot;acc:q9y2r5]\vspace{3pt}}&&&\parbox{\wcE}{\vspace{3pt}\noindent 28492\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 21185\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 7307\vspace{3pt}}\\\cline{2-7} &\parbox{\wcB}{\vspace{3pt}\noindent homeobox protein hlx1 (homeobox protein hb24). [source:swissprot;acc:q14774]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent Ranked\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 322\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 215\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 1.49767\vspace{3pt}}\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/