Scientific
MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis
These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.
MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.
Navigation/Query Panel:
Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
description Value Type Interaction Map Rank Network Comparison Type red Gene Filtered green network_comparison
Results: HTML CSV LaTeX
Showing element 808 to 857 of 3228 in total
Value Type: Measured
Interaction Map: High confidence
Network Comparison Type: Divided
Filtered: 1

\def\wcA{0.16666666666667\textwidth}
\def\wcB{0.16666666666667\textwidth}
\def\wcC{0.16666666666667\textwidth}
\def\wcD{0.16666666666667\textwidth}
\def\wcE{0.16666666666667\textwidth}
\begin{longtable}{|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna excision repair protein ercc-1. [source:swissprot;acc:p07992]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
3216\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna fragmentation factor 40 kda subunit (ec 3.-.-.-) (dff-40) (caspase-activated deoxyribonuclease) (caspase-activated dnase) (cad) (caspase-activated nuclease) (cpan). [source:swissprot;acc:o76075]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1529\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
5916.05\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6350.53\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.07344\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
dna fragmentation factor alpha subunit (dna fragmentation factor 45 kda subunit) (dff-45) (inhibitor of cad) (icad). [source:swissprot;acc:o00273]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1531\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna ligase i (ec 6.5.1.1) (polydeoxyribonucleotide synthase [atp]). [source:swissprot;acc:p18858]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
3103\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
dna ligase iv (ec 6.5.1.1) (polydeoxyribonucleotide synthase [atp]). [source:swissprot;acc:p49917]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2808\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
dna methyltransferase 1-associated protein 1 (dnmt1-associated protein 1) (dnmap1). [source:swissprot;acc:q9npf5]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2796\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna mismatch repair protein mlh1 (mutl protein homolog 1). [source:swissprot;acc:p40692]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
938\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5859.25\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6432.03\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09776\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna mismatch repair protein mlh3 (mutl protein homolog 3). [source:swissprot;acc:q9uhc1]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
726\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6327.86\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7064.13\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11635\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna mismatch repair protein msh2. [source:swissprot;acc:p43246]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
3151\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
dna mismatch repair protein msh6 (muts-alpha 160 kda subunit) (g/t mismatch binding protein) (gtbp) (gtmbp) (p160). [source:swissprot;acc:p52701]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
3045\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna polymerase delta p38 subunit. [source:refseq;acc:nm\_015584]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1575\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5106.13\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5472.96\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07184\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna polymerase epsilon p12 subunit (dna polymerase epsilon subunit 4). [source:swissprot;acc:q9nr33]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
336\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3751.3\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4431.34\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.18128\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna polymerase epsilon p17 subunit (dna polymerase epsilon subunit 3) (chromatin accessibility complex 17) (huchrac17) (chrac-17). [source:swissprot;acc:q9nrf9]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2321\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3496.21\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3652.28\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04464\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna polymerase epsilon subunit b (ec 2.7.7.7) (dna polymerase ii subunit b). [source:swissprot;acc:p56282]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
758\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3760.3\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4185.82\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11316\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna polymerase epsilon, catalytic subunit a (ec 2.7.7.7) (dna polymerase ii subunit a). [source:swissprot;acc:q07864]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
367\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4024.4\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4719.35\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.17268\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna polymerase gamma subunit 1 (ec 2.7.7.7) (mitochondrial dna polymerase catalytic subunit) (polg-alpha). [source:swissprot;acc:p54098]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1315\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5685.77\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6145.43\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.08084\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna repair protein rad51 homolog 1 (hrad51) (hsrad51). [source:swissprot;acc:q06609]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1160\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5538.8\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6025.51\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.08787\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna repair protein rad52 homolog. [source:swissprot;acc:p43351]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2194\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5285.38\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5034.86\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04976\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna replication licensing factor mcm3 (dna polymerase alpha holoenzyme-associated protein p1) (rlf beta subunit) (p102 protein) (p1-mcm3). [source:swissprot;acc:p25205]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1492\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4619.81\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4965.45\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07482\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna replication licensing factor mcm5 (cdc46 homolog) (p1-cdc46). [source:swissprot;acc:p33992]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2001\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5047.2\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5344.68\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05894\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna replication licensing factor mcm8 (minichromosome maintenance 8). [source:swissprot;acc:q9uja3]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
3011\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna segment on chromosome 6(unique) 2654 expressed sequence; dna segment on chromosome x (unique) 2654 expressed sequence. [source:refseq;acc:nm\_012135]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1265\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5894.47\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6383.73\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.083\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna topoisomerase ii, alpha isozyme (ec 5.99.1.3). [source:swissprot;acc:p11388]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
794\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6441.17\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7154.55\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11075\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna topoisomerase ii, beta isozyme (ec 5.99.1.3). [source:swissprot;acc:q02880]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
795\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6441.14\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7154.13\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.11069\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna topoisomerase iii alpha (ec 5.99.1.2). [source:swissprot;acc:q13472]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1433\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5692.34\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6131.71\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07719\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna-(apurinic or apyrimidinic site) lyase (ec 4.2.99.18) (ap endonuclease 1) (apex nuclease) (apen) (ref-1 protein). [source:swissprot;acc:p27695]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1065\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6393.81\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6984.94\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.09245\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna-binding protein a (cold shock domain protein a) (single-strand dna binding protein nf-gmb). [source:swissprot;acc:p16989]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2095\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6682.05\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7051.02\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05522\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna-binding protein rfxank (regulatory factor x subunit b) (rfx-b) (ankyrin repeat family a protein 1). [source:swissprot;acc:o14593]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2728\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5603.24\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5583.64\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.00351\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna-directed rna polymerase i 135 kda polypeptide (ec 2.7.7.6) (rna polymerase i subunit 2) (rpa135). [source:swissprot;acc:q9h9y6]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2533\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3847.84\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3759.28\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02356\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna-directed rna polymerase i 16 kda polypeptide (ec 2.7.7.6) (rpa16). [source:swissprot;acc:q9y2s0]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2069\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4632.65\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4892.66\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05613\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna-directed rna polymerase i 40 kda polypeptide (ec 2.7.7.6) (rpa40) (rpa39). [source:swissprot;acc:o15160]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2523\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3803.04\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3710.01\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02508\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna-directed rna polymerase i largest subunit (ec 2.7.7.6) (rna polymerase i 194 kda subunit) (rpa194). [source:swissprot;acc:o95602]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2381\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3667.94\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3521.41\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04161\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna-directed rna polymerase ii 13.3 kda polypeptide (ec 2.7.7.6) (rpb11). [source:swissprot;acc:p52435]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2371\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4668.29\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4868.52\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04289\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna-directed rna polymerase ii 14.4 kda polypeptide (ec 2.7.7.6) (rpb6) (rpb14.4) (rpabc2). [source:swissprot;acc:p41584]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2629\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4582.38\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4649.17\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01458\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna-directed rna polymerase ii 14.5 kda polypeptide (ec 2.7.7.6) (rpb9) (rpb14.5). [source:swissprot;acc:p36954]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2546\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4763.99\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4868.66\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02197\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna-directed rna polymerase ii 140 kda polypeptide (ec 2.7.7.6) (rna polymerase ii subunit 2) (rpb2). [source:swissprot;acc:p30876]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2306\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3619.07\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3461.21\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04561\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna-directed rna polymerase ii 16 kda polypeptide (ec 2.7.7.6) (rpb4). [source:swissprot;acc:o15514]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2446\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4031.94\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4166.99\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0335\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna-directed rna polymerase ii 19 kda polypeptide (ec 2.7.7.6) (rpb7). [source:swissprot;acc:p52433]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2581\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4570.81\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4654.97\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01841\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna-directed rna polymerase ii 23 kda polypeptide (ec 2.7.7.6) (rpb25) (xap4) (rpb5) (rpabc1). [source:swissprot;acc:p19388]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2582\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3899.28\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3829.53\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01821\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna-directed rna polymerase ii 33 kda polypeptide (ec 2.7.7.6) (rpb3) (rna polymerase ii subunit 3) (rpb33) (rpb31). [source:swissprot;acc:p19387]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2555\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3852.99\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3775.86\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.02043\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna-directed rna polymerase ii 7.6 kda polypeptide (ec 2.7.7.6) (rpb10) (rpb7.6) (rpabc5). [source:swissprot;acc:p52436]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2667\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4071.9\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4099.01\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.00666\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna-directed rna polymerase ii largest subunit (ec 2.7.7.6) (rpb1). [source:swissprot;acc:p24928]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2163\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3569.06\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3392.22\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.05213\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna-directed rna polymerase iii largest subunit (ec 2.7.7.6) (rpc155) (rpc1). [source:swissprot;acc:o14802]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2374\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3669.57\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3520.86\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04224\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna-directed rna polymerases i, ii, and iii 17.1 kda polypeptide (ec 2.7.7.6) (rpb17) (rpb8) (rpabc3). [source:swissprot;acc:p52434]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2740\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4200.59\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4210.94\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.00246\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna-directed rna polymerases iii 12.5 kda polypeptide (ec 2.7.7.6) (rna polymerase iii c11 subunit) (hsc11p) (hrpc11) (my010 protein). [source:swissprot;acc:q9y2y1]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1795\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5501.3\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5866.02\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0663\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna-directed rna polymerases iii 39 kda polypeptide (ec 2.7.7.6) (rna polymerase iii c39 subunit). [source:swissprot;acc:q9h1d9]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2633\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4000.73\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3947.54\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01347\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna-repair protein complementing xp-a cells (xeroderma pigmentosum group a complementing protein). [source:swissprot;acc:p23025]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2971\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
0.00001\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
dna-repair protein complementing xp-f cell (xeroderma pigmentosum group f complementing protein) (dna excision repair protein ercc-4). [source:swissprot;acc:q92889]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2801\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna-repair protein complementing xp-g cells (xeroderma pigmentosum group g complementing protein) (dna excision repair protein ercc-5). [source:swissprot;acc:p28715]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2641\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3377.01\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3411.47\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0102\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
dna-repair protein xrcc3 (x-ray repair cross-complementing protein 3). [source:swissprot;acc:o43542]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
1550\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6025.86\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6464.16\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.07274\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/