Scientific
MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis
These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.
MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.
Navigation/Query Panel:
Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX
Showing element 3758 to 3807 of 12912 in total
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1

\def\wcA{0.14285714285714\textwidth}
\def\wcB{0.14285714285714\textwidth}
\def\wcC{0.14285714285714\textwidth}
\def\wcD{0.14285714285714\textwidth}
\def\wcE{0.14285714285714\textwidth}
\def\wcF{0.14285714285714\textwidth}
\begin{longtable}{|c|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Value Type\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\multirow{3}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
940\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
calcium-dependent protease, small subunit (calpain regulatory subunit) (calcium-activated neutral proteinase) (canp). [source:swissprot;acc:p04632]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
212.442\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
205.088\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.03586\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
ganglioside-induced differentiation-associated protein 1. [source:refseq;acc:nm\_018972]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
62.3618\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
66.0328\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.05887\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
glycerol-3-phosphate dehydrogenase, mitochondrial precursor (ec 1.1.99.5) (gpd-m) (gpdh-m). [source:swissprot;acc:p43304]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
25108.4\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
28986.7\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.15446\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
941\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
5-methyltetrahydrofolate--homocysteine methyltransferase (ec 2.1.1.13) (methionine synthase, vitamin-b12 dependent) (ms). [source:swissprot;acc:q99707]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
26005.2\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
30020.3\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.1544\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
caax prenyl protease 1 homolog (ec 3.4.24.-) (prenyl protein-specific endoprotease 1) (farnesylated-proteins converting enzyme 1) (face-1) (zinc metalloproteinase ste24 homolog). [source:swissprot;acc:o75844]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4970.21\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
5455.34\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.09761\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
swi/snf-related, matrix-associated, actin-dependent regulator of chromatin subfamily f member 1 (swi-snf complex protein p270) (b120). [source:swissprot;acc:o14497]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
212.437\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
205.083\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.03586\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
vacuolar atp synthase subunit d (ec 3.6.3.14) (v-atpase d subunit) (vacuolar proton pump d subunit) (v-atpase 28 kda accessory protein). [source:swissprot;acc:q9y5k8]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
62.3618\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
66.0328\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.05887\vspace{3pt}}\\\hline
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
942\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
cyclin m2; ancient conserved domain protein 2. [source:refseq;acc:nm\_017649]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
23659.9\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
27312.6\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.15438\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
grancalcin. [source:swissprot;acc:p28676]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
212.442\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
205.088\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.03586\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
phosphoglycerate kinase, testis specific (ec 2.7.2.3). [source:swissprot;acc:p07205]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6597.56\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
7240.64\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.09747\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
secretory pathway component sec31b-1. [source:refseq;acc:nm\_015490]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
62.3618\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
66.0328\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.05887\vspace{3pt}}\\\hline
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
943\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
cyclin m4; ancient conserved domain protein 4. [source:refseq;acc:nm\_020184]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
23659.2\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
27311.3\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.15436\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
gamma enolase (ec 4.2.1.11) (2-phospho-d-glycerate hydro-lyase) (neural enolase) (nse) (enolase 2). [source:swissprot;acc:p09104]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6597.98\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
7241\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.09746\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
sorcin (22 kda protein) (cp-22) (v19). [source:swissprot;acc:p30626]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
212.442\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
205.087\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.03586\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
vacuolar atp synthase subunit h (ec 3.6.3.14) (v-atpase h subunit) (vacuolar proton pump h subunit) (v-atpase 50/57 kda subunits) (vacuolar proton pump subunit sfd) (cgi-11). [source:swissprot;acc:q9ui12]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
62.3617\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
66.0327\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.05887\vspace{3pt}}\\\hline
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
944\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
beta enolase (ec 4.2.1.11) (2-phospho-d-glycerate hydro-lyase) (skeletal muscle enolase) (mse) (enolase 3). [source:swissprot;acc:p13929]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6597.98\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
7241\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.09746\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
programmed cell death protein 6 (probable calcium-binding protein alg- 2). [source:swissprot;acc:o75340]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
212.437\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
205.083\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.03586\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
tcd37 homolog; prune. [source:refseq;acc:nm\_021222]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
23659.1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
27311.1\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.15436\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
vacuolar atp synthase subunit b, kidney isoform (ec 3.6.3.14) (v- atpase b1 subunit) (vacuolar proton pump b isoform 1) (endomembrane proton pump 58 kda subunit). [source:swissprot;acc:p15313]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
62.3614\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
66.0323\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.05886\vspace{3pt}}\\\hline
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
945\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
alpha enolase (ec 4.2.1.11) (2-phospho-d-glycerate hydro-lyase) (non- neural enolase) (nne) (enolase 1) (phosphopyruvate hydratase). [source:swissprot;acc:p06733]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6597.98\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
7241\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.09746\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
brg1-binding protein eld/osa1; eld (eyelid)/osa protein. [source:refseq;acc:nm\_020732]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
212.44\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
205.085\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.03586\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
cyclin m1; ancient conserved domain protein 1. [source:refseq;acc:nm\_020348]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
23658.7\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
27310.2\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.15434\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
vacuolar proton translocating atpase 116 kda subunit a isoform 2 (v-atpase 116-kda isoform a2) (tj6). [source:swissprot;acc:q9y487]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
62.409\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
66.0815\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.05885\vspace{3pt}}\\\hline
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
946\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
cyclin m3; ancient conserved domain protein 3. [source:refseq;acc:nm\_017623]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
23658.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
27309.8\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.15433\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
histone h4. [source:swissprot;acc:p02304]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
227.765\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
219.902\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.03576\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
phosphoglycerate kinase 1 (ec 2.7.2.3) (primer recognition protein 2) (prp 2). [source:swissprot;acc:p00558]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6598.37\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
7241.32\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.09744\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
vacuolar proton translocating atpase 116 kda subunit a isoform 3 (v- atpase 116-kda isoform a3) (osteoclastic proton pump 116 kda subunit) (oc-116 kda) (oc116) (t-cell immune regulator 1) (t cell immune response cdna7 protein) (tirc7). [source:swissprot;acc:q13488]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
62.4087\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
66.0813\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.05885\vspace{3pt}}\\\hline
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
947\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
arg/abl-interacting protein 2 isoform 2; arg binding protein 2. [source:refseq;acc:nm\_021069]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
212.51\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
205.191\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.03567\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
atpase, h+ transporting, lysosomal v0 subunit a isoform 4; vacuolar proton pump 116 kda accessory subunit; vacuolar proton pump, subunit 2; h(+)-transporting two-sector atpase, noncatalytic accessory protein 1b; atpase, h+ transporting, lysosomal (vacuolar proton pump) non-catalytic accessory protein 1b; renal tubular acidosis; atpase, h+ transporting, lysosomal (vacuolar proton pump) non-catalytic accessory protein 2 (38kd). [source:refseq;acc:nm\_020632]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
62.4093\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
66.0819\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.05885\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
signal transducing adaptor molecule 1; signal transducing adaptor molecule. [source:refseq;acc:nm\_003473]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
11797.1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
10750.2\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.09738\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
thymidylate kinase (ec 2.7.4.9) (dtmp kinase). [source:swissprot;acc:p23919]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
24999.1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
28856.8\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.15431\vspace{3pt}}\\\hline
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
948\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
caspase-7 precursor (ec 3.4.22.-) (ice-like apoptotic protease 3) (ice-lap3) (apoptotic protease mch-3) (cmh-1). [source:swissprot;acc:p55210]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4633.48\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
5084.24\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.09728\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
target of myb protein 1. [source:swissprot;acc:o60784]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
217.254\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
209.824\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.03541\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
vacuolar proton translocating atpase 116 kda subunit a isoform 1 (clathrin-coated vesicle/synaptic vesicle proton pump 116 kda subunit) (vacuolar proton pump subunit 1) (vacuolar adenosine triphosphatase subunit ac116). [source:swissprot;acc:q93050]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
62.4102\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
66.0829\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.05885\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
xylulokinase homolog; xylulokinase (h. influenzae) homolog. [source:refseq;acc:nm\_005108]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
25295.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
29197.3\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.15425\vspace{3pt}}\\\hline
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
949\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
apopain precursor (ec 3.4.22.-) (cysteine protease cpp32) (yama protein) (cpp-32) (caspase-3) (casp-3) (srebp cleavage activity 1) (sca-1). [source:swissprot;acc:p42574]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4633.48\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
5084.24\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.09728\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
heterogeneous nuclear ribonucleoprotein l (hnrnp l). [source:swissprot;acc:p14866]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
82.2821\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
87.1197\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.05879\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
huntingtin-associated protein-interacting protein (duo protein). [source:swissprot;acc:o60229]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
217.253\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
209.826\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.0354\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
mms19-like (met18 homolog, s. cerevisiae); homolog of yeast mms19; mms19 (met18 s. cerevisiae)-like. [source:refseq;acc:nm\_022362]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
27084.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
31257.9\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.15409\vspace{3pt}}\\\hline
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
950\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
bystin. [source:swissprot;acc:q13895]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4280.99\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
4697.02\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.09718\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
dna-repair protein complementing xp-g cells (xeroderma pigmentosum group g complementing protein) (dna excision repair protein ercc-5). [source:swissprot;acc:p28715]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
252.873\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
261.821\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.03539\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
estrogen-related receptor gamma (estrogen receptor related protein 3) (err gamma-2). [source:swissprot;acc:o75454]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
82.2706\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
87.1037\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.05875\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
lupus la protein (sjogren syndrome type b antigen) (ss-b) (la ribonucleoprotein) (la autoantigen). [source:swissprot;acc:p05455]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
16129.2\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
18614.3\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.15407\vspace{3pt}}\\\hline
\multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
951\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
dimethylaniline monooxygenase [n-oxide forming] 5 (ec 1.14.13.8) (hepatic flavin-containing monooxygenase 5) (fmo 5) (dimethylaniline oxidase 5). [source:swissprot;acc:p49326]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5364.3\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
5885.48\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.09716\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
gtp cyclohydrolase i (ec 3.5.4.16) (gtp-ch-i). [source:swissprot;acc:p30793]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
19634.1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
22653.4\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.15378\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
sirtuin 7; sir2-related protein type 7; sirtuin type 7; sirtuin (silent mating type information regulation 2, s.cerevisiae, homolog) 7; silent mating type information regulation 2, s.cerevisiae, homolog 7; sirtuin silent mating type information regulation 2 homolog 7 (s. cerevisiae). [source:refseq;acc:nm\_016538]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
56.264\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
59.5672\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.05871\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
triple functional domain protein (ptprf interacting protein). [source:swissprot;acc:o75962]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
217.253\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
209.827\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.03539\vspace{3pt}}\\\hline
\multirow{3}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
952\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
casein kinase ii beta chain (ck ii) (phosvitin) (g5a). [source:swissprot;acc:p13862]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
56.264\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
59.5672\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.05871\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
my016 protein. [source:sptrembl;acc:q9h3k6]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
18239.4\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
21037.9\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.15343\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
putative dimethylaniline monooxygenase [n-oxide forming] 6 (ec 1.14.13.8) (flavin-containing monooxygenase 6) (fmo 6) (dimethylaniline oxidase 6). [source:swissprot;acc:o60774]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5364.3\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
5885.48\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.09716\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/