Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 833 to 882 of 3228 in total
Value Type: Ranked
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1
\def\wcA{0.16666666666667\textwidth} \def\wcB{0.16666666666667\textwidth} \def\wcC{0.16666666666667\textwidth} \def\wcD{0.16666666666667\textwidth} \def\wcE{0.16666666666667\textwidth} \begin{longtable}{|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent 833\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent pc4 and sfrs1 interacting protein 2; pc4 and sfrs1 interacting protein 1; transcriptional coactivator p52/p75. [source:refseq;acc:nm\_033222]\vspace{3pt}}&\multirow{6}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 231.734\vspace{3pt}}}&\multirow{6}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 222.222\vspace{3pt}}}&\multirow{6}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.0428\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 834\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 60s ribosomal protein l8. [source:swissprot;acc:p25120]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 835\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent hepatoma-derived growth factor (hdgf) (high-mobility group protein 1- like 2) (hmg-1l2). [source:swissprot;acc:p51858]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 836\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent pwwp domain containing 1; hdgf (hepatoma-derived growth factor) like. [source:refseq;acc:nm\_138574]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 837\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent probable atp-dependent rna helicase p54 (oncogene rck) (dead-box protein 6). [source:swissprot;acc:p26196]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 838\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent rw1 protein (fragment). [source:swissprot;acc:q92545]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 839\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent stem cell growth factor; lymphocyte secreted c-type lectin; lymphocyte secreted c-type lectin. [source:refseq;acc:nm\_002975]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 177.776\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 170.499\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.04268\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 840\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent mitochondrial import receptor subunit tom20 homolog (mitochondrial 20 kda outer membrane protein) (outer mitochondrial membrane receptor tom20). [source:swissprot;acc:q15388]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 198.781\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 190.66\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.04259\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 841\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent peroxisomal farnesylated protein (33 kda housekeeping protein) (peroxin 19). [source:swissprot;acc:p40855]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 842\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent jm1 protein. [source:refseq;acc:nm\_014008]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 219.762\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 210.806\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.04248\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 843\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent trifunctional purine biosynthetic protein adenosine-3 [includes: phosphoribosylamine--glycine ligase (ec 6.3.4.13) (gars) (glycinamide ribonucleotide synthetase) (phosphoribosylglycinamide synthetase); phosphoribosylformylglycinamidine cyclo-ligase (ec 6.3.3.1) (airs) (phosphoribosyl-aminoimidazole synthetase) (air synthase); phosphoribosylglycinamide formyltransferase (ec 2.1.2.2) (gart) (gar transformylase) (5'-phosphoribosylglycinamide transformylase)]. [source:swissprot;acc:p22102]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 218.521\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 227.796\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.04244\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 844\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent c-type lectin superfamily member 1 precursor (cartilage-derived c-type lectin). [source:swissprot;acc:o75596]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 178.033\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 170.82\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.04223\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 845\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent u6 snrna-associated sm-like protein lsm1 (small nuclear ribonuclear casm) (cancer-associated sm-like). [source:swissprot;acc:o15116]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 228.599\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 219.399\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.04193\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 846\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent methyltransferase like 2. [source:refseq;acc:nm\_018396]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 147.211\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 153.371\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.04184\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 847\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent cytoplasmic dynein light chain (t-complex testis-specific protein 1 homolog) (protein cw-1). [source:swissprot;acc:q15763]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 848\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent fzr1 protein; fizzy-related protein; cdc20-like 1b. [source:refseq;acc:nm\_016263]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 849\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent proprotein convertase subtilisin/kexin type 5 precursor (ec 3.4.21.-) (proprotein convertase pc5) (subtilisin/kexin-like protease pc5) (convertase pc5) (pc6) (hpc6). [source:swissprot;acc:q92824]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 850\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent cleavage and polyadenylation specific factor 4, 30kd subunit; cleavage-polyadenylation specificity factor, 30kd; no arches-like (zebrafish) zinc finger protein; cleavage-polyadenylation specificity factor. [source:refseq;acc:nm\_006693]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 107.842\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 112.329\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.04161\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 851\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent trs85 homolog. [source:swissprot;acc:q9y2l5]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 852\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent hypoxanthine-guanine phosphoribosyltransferase (ec 2.4.2.8) (hgprt) (hgprtase). [source:swissprot;acc:p00492]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 193.114\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 185.412\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.04154\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 853\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent wd-repeat protein wdc146. [source:swissprot;acc:q9c0j8]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 108.289\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 112.772\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.0414\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 854\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent cleavage and polyadenylation specificity factor, 160 kda subunit (cpsf 160 kda subunit). [source:swissprot;acc:q10570]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 855\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent tetranectin precursor (tn) (plasminogen-kringle 4 binding protein). [source:swissprot;acc:p05452]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 178.514\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 171.42\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.04138\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 856\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent xenotropic and polytropic retrovirus receptor. [source:refseq;acc:nm\_004736]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 215.028\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 206.623\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.04068\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 857\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent putatative 28 kda protein. [source:refseq;acc:nm\_020143]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 227.241\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 236.467\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0406\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 858\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent syntaxin 12. [source:refseq;acc:nm\_177424]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 217.446\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 208.997\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.04043\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 859\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 60s ribosomal protein l39. [source:swissprot;acc:p02404]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 234.025\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 224.958\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.04031\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 860\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 60s ribosomal protein l18a. [source:swissprot;acc:q02543]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 861\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 40s ribosomal protein s19. [source:swissprot;acc:p39019]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 862\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 60s ribosomal protein l31. [source:swissprot;acc:p12947]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 863\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent casein kinase ii, alpha chain (ck ii) (ec 2.7.1.37). [source:swissprot;acc:p19138]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 240.194\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 230.957\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.03999\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 864\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent casein kinase ii, alpha' chain (ck ii) (ec 2.7.1.37). [source:swissprot;acc:p19784]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 865\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent transcription factor btf3 (rna polymerase b transcription factor 3). [source:swissprot;acc:p20290]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 211.961\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 203.814\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03997\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 866\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent signal recognition particle 68 kda protein (srp68). [source:swissprot;acc:q9uhb9]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 221.306\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 212.806\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03994\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 867\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 40s ribosomal protein s3a. [source:swissprot;acc:p49241]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 225.689\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 234.674\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03981\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 868\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent diphosphomevalonate decarboxylase (ec 4.1.1.33) (mevalonate pyrophosphate decarboxylase) (mevalonate (diphospho)decarboxylase). [source:swissprot;acc:p53602]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 233.298\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 242.571\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03975\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 869\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent exocyst complex component sec8. [source:swissprot;acc:q96a65]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 217.762\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 209.449\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03969\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 870\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent transcription factor btf3 homolog 3. [source:swissprot;acc:q13892]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 211.908\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 203.832\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03962\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 871\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent cleavage and polyadenylation specificity factor, 100 kda subunit (cpsf 100 kda subunit) (fragment). [source:swissprot;acc:q9p2i0]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 110.2\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 114.552\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03949\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 872\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent heterogeneous nuclear ribonucleoprotein k (hnrnp k) (dc-stretch binding protein) (csbp) (transformation upregulated nuclear protein) (tunp). [source:swissprot;acc:q07244]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 224.413\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 233.272\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.03948\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 873\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent u4/u6 small nuclear ribonucleoprotein prp4 (u4/u6 snrnp 60 kda protein) (wd splicing factor prp4) (hprp4). [source:swissprot;acc:o43172]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 874\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 5'-amp-activated protein kinase, gamma-1 subunit (ampk gamma-1 chain) (ampkg). [source:swissprot;acc:p54619]\vspace{3pt}}&\multirow{7}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 212.002\vspace{3pt}}}&\multirow{7}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 203.954\vspace{3pt}}}&\multirow{7}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.03946\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 875\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 5'-amp-activated protein kinase, catalytic alpha-2 chain (ec 2.7.1.-) (ampk alpha-2 chain). [source:swissprot;acc:p54646]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 876\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 5'-amp-activated protein kinase, catalytic alpha-1 chain (ec 2.7.1.-) (ampk alpha-1 chain). [source:swissprot;acc:q13131]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 877\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 5'-amp-activated protein kinase, beta-2 subunit (ampk beta-2 chain). [source:swissprot;acc:o43741]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 878\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 5'-amp-activated protein kinase, gamma-3 subunit (ampk gamma-3 chain) (ampk gamma3). [source:swissprot;acc:q9ugi9]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 879\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 5'-amp-activated protein kinase, beta-1 subunit (ampk beta-1 chain) (ampkb). [source:swissprot;acc:q9y478]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 880\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 5'-amp-activated protein kinase, gamma-2 subunit (ampk gamma-2 chain) (ampk gamma2) (h91620p). [source:swissprot;acc:q9ugj0]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 881\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent l-myc-1 proto-oncogene protein. [source:swissprot;acc:p12524]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 227.604\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 219.001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03928\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 882\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent n-myc proto-oncogene protein. [source:swissprot;acc:p04198]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 227.601\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 219.008\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03924\vspace{3pt}}\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/