Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 744 to 793 of 3228 in total
Value Type: Ranked
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1
\def\wcA{0.16666666666667\textwidth} \def\wcB{0.16666666666667\textwidth} \def\wcC{0.16666666666667\textwidth} \def\wcD{0.16666666666667\textwidth} \def\wcE{0.16666666666667\textwidth} \begin{longtable}{|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent 744\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent septin 6. [source:swissprot;acc:q14141]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 126.604\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 120.463\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05098\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 745\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent solute carrier family 35, member b1; udp-galactose transporter related. [source:refseq;acc:nm\_005827]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 214.679\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 225.568\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05072\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 746\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent eukaryotic translation initiation factor 3 subunit 2 (eif-3 beta) (eif3 p36) (eif3i) (tgf-beta receptor interacting protein 1) (trip-1). [source:swissprot;acc:q13347]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 250.465\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 238.38\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.0507\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 747\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent trinucleotide repeat containing 15. [source:refseq;acc:nm\_015575]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 748\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent fibrillarin (34 kda nucleolar scleroderma antigen). [source:swissprot;acc:p22087]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 245.246\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 233.483\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05038\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 749\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent exocyst complex component sec15b. [source:swissprot;acc:q9y2d4]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 221.968\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 211.326\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05036\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 750\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent exocyst complex component sec15a. [source:swissprot;acc:q8tag9]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 222.138\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 211.503\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05028\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 751\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent u2 small nuclear ribonucleoprotein auxiliary factor 35 kda subunit related-protein 1. [source:swissprot;acc:q15695]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 223.463\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 212.875\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.04974\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 752\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent step ii splicing factor slu7. [source:refseq;acc:nm\_006425]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 753\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent lipopolysaccharide-binding protein precursor (lbp). [source:swissprot;acc:p18428]\vspace{3pt}}&\multirow{6}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 224.434\vspace{3pt}}}&\multirow{6}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 235.583\vspace{3pt}}}&\multirow{6}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.04968\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 754\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent microsomal signal peptidase 25 kda subunit (ec 3.4.-.-) (spase 25 kda subunit) (spc25). [source:swissprot;acc:q15005]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 755\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent uridine 5'-monophosphate synthase (ump synthase) [includes: orotate phosphoribosyltransferase (ec 2.4.2.10) (oprtase); orotidine 5'- phosphate decarboxylase (ec 4.1.1.23) (ompdecase)]. [source:swissprot;acc:p11172]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 756\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent cleft lip and palate associated transmembrane protein 1. [source:refseq;acc:nm\_001294]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 757\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent bactericidal permeability-increasing protein precursor (bpi) (cap 57). [source:swissprot;acc:p17213]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 758\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent phospholipid transfer protein precursor (lipid transfer protein ii). [source:swissprot;acc:p55058]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 759\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent osteoclast stimulating factor 1. [source:swissprot;acc:q92882]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 231.809\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 243.289\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.04952\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 760\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent upf0202 protein kiaa1709. [source:swissprot;acc:q9h0a0]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 246.055\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 234.458\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.04946\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 761\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent signal transduction protein cbl-b (sh3-binding protein cbl-b). [source:swissprot;acc:q13191]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 213.325\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 203.303\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.0493\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 762\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent cbl e3 ubiquitin protein ligase (ec 6.3.2.-) (signal transduction protein cbl) (proto-oncogene c-cbl). [source:swissprot;acc:p22681]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 213.256\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 203.237\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 763\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent putative n6-dna-methyltransferase (ec 2.1.1.-) (protein pred28) (m.hsahemk2p). [source:swissprot;acc:q9y5n5]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 228.78\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 218.091\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.04901\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 764\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent u4/u6-associated rna splicing factor. [source:refseq;acc:nm\_004698]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 222.082\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 211.707\vspace{3pt}}&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 765\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent hemk protein homolog (ec 2.1.1.-) (m.hsahemkp). [source:swissprot;acc:q9y5r4]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 229.045\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 218.343\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 766\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent protein tara (trio-associated repeat on actin) (hrihfb2122). [source:swissprot;acc:q9h2d6]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 213.804\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 224.226\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.04875\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 767\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent rho interacting protein 3. [source:refseq;acc:nm\_015134]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 213.803\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 224.224\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.04874\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 768\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dnaj homolog subfamily b member 4 (heat shock 40 kda protein 1 homolog) (heat shock protein 40 homolog) (hsp40 homolog). [source:swissprot;acc:q9udy4]\vspace{3pt}}&\multirow{6}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 210.946\vspace{3pt}}}&\multirow{6}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 221.225\vspace{3pt}}}&\multirow{6}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.04873\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 769\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent cab2. [source:refseq;acc:nm\_033419]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 770\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dnaj homolog subfamily b member 5 (heat shock protein hsp40-3) (heat shock protein cognate 40) (hsc40) (hsp40-2). [source:swissprot;acc:o75953]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 771\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dnaj homolog subfamily b member 1 (heat shock 40 kda protein 1) (heat shock protein 40) (hsp40) (dnaj protein homolog 1) (hdj-1). [source:swissprot;acc:p25685]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 772\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent eukaryotic peptide chain release factor subunit 1 (erf1) (eukaryotic release factor 1) (tb3-1) (c11 protein). [source:swissprot;acc:p46055]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 773\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent suppressor of actin mutations 2-like isoform b; dj1033b10.5. [source:refseq;acc:nm\_022553]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 774\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent multiple coagulation factor deficiency 2; neural stem cell derived neuronal survival protein; multiple coagulation factor deficiency protein 2. [source:refseq;acc:nm\_139279]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 225.996\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 215.535\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.04854\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 775\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent histone deacetylase 2 (hd2). [source:swissprot;acc:q92769]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 226.003\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 215.541\vspace{3pt}}&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 776\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dj153g14.2 (possible ca binding protein similar to nefa) (fragment). [source:sptrembl;acc:q9ujn8]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 225.996\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 215.535\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 777\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent histone deacetylase 1 (hd1). [source:swissprot;acc:q13547]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 225.989\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 215.53\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.04853\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 778\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent sorting nexin 6 (traf4-associated factor 2). [source:swissprot;acc:q9unh7]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 209.191\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 219.332\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.04848\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 779\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent deoxycytidylate deaminase (ec 3.5.4.12) (dcmp deaminase). [source:swissprot;acc:p32321]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 230.516\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 241.641\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.04826\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 780\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dna-directed rna polymerase ii 14.4 kda polypeptide (ec 2.7.7.6) (rpb6) (rpb14.4) (rpabc2). [source:swissprot;acc:p41584]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 232.762\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 243.933\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.04799\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 781\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ribosomal protein p0-like protein; 60s acidic ribosomal protein po; ribosomal protein, large, p0-like. [source:refseq;acc:nm\_016183]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 245.84\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 257.636\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.04798\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 782\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent translin. [source:swissprot;acc:q15631]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 224.385\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 235.131\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.04789\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 783\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent translin-associated protein x (translin-associated factor x). [source:swissprot;acc:q99598]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 784\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent polyglutamine binding protein 1; nuclear protein containing ww domain 38 kd. [source:refseq;acc:nm\_005710]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 785\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent neuroepithelial cell transforming gene 1; guanine nucleotide regulatory protein (oncogene); rho guanine nucleotide exchange factor (gef) 8. [source:refseq;acc:nm\_005863]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 244.447\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 233.508\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.04685\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 786\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent rho guanine nucleotide exchange factor 3; rhogef protein; 59.8 kda protein; exchange factor found in platelets and leukemic and neuronal tissues, xpln. [source:refseq;acc:nm\_019555]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 787\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent down-regulated in metastasis. [source:refseq;acc:nm\_014503]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 788\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent hira-interacting protein 5 (cgi-33). [source:swissprot;acc:q9ums0]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 138.705\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 132.538\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.04653\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 789\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 40s ribosomal protein sa (p40) (34/67 kda laminin receptor) (colon carcinoma laminin-binding protein) (nem/1chd4) (multidrug resistance- associated protein mgr1-ag). [source:swissprot;acc:p08865]\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 224.244\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 234.511\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.04578\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 790\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 40s ribosomal protein s21. [source:swissprot;acc:p35265]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 791\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent cytoplasmic antiproteinase 3 (cap3) (cap-3) (protease inhibitor 9) (serpin b9). [source:swissprot;acc:p50453]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 792\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent maspin precursor (protease inhibitor 5). [source:swissprot;acc:p36952]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 793\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent bomapin (protease inhibitor 10) (serpin b10). [source:swissprot;acc:p48595]\vspace{3pt}}&&&\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/