Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red network_comparison green
Results: HTML CSV LaTeX Showing element 501 to 550 of 7460 in total
Value Type: Ranked
Interaction Map: High confidence
\def\wcA{0.125\textwidth} \def\wcB{0.125\textwidth} \def\wcC{0.125\textwidth} \def\wcD{0.125\textwidth} \def\wcE{0.125\textwidth} \def\wcF{0.125\textwidth} \def\wcG{0.125\textwidth} \begin{longtable}{|c|c|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Network Comparison Type\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent Filtered\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent green\vspace{3pt}}\\ \hline \hline \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 126\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent associated molecule with the sh3 domain of stam (amsh) like protein. [source:refseq;acc:nm\_020799]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 94\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.21277\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 114\vspace{3pt}}\\\cline{2-7} &\parbox{\wcB}{\vspace{3pt}\noindent cytochrome p450 4f2 (ec 1.14.13.30) (cypivf2) (leukotriene-b4 omega- hydroxylase) (leukotriene-b4 20-monooxygenase) (cytochrome p450- ltb-omega). [source:swissprot;acc:p78329]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 12314.9\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1825.6\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 10489.3\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent f-box protein fbw7 isoform 2; archipelago, drosophila, homolog of; f-box protein fbw7; f-box protein sel-10; homolog of c elegans sel-10. [source:refseq;acc:nm\_018315]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 285.684\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 33.45\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 252.234\vspace{3pt}}\\\cline{2-7} &\parbox{\wcB}{\vspace{3pt}\noindent ret finger protein 2 (leukemia associated protein 5) (b-cell chronic lymphocytic leukemia tumor suppressor leu5) (putative tumor suppressor rfp2) (tripartite motif protein 13). [source:swissprot;acc:o60858]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 9722.71\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.18216\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 11493.8\vspace{3pt}}\\\cline{1-3}\cline{5-7} \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 127\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent ccr4-not transcription complex, subunit 7 (ccr4-associated factor 1) (caf1) (btg1 binding factor 1). [source:swissprot;acc:q9uiv1]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&&\parbox{\wcE}{\vspace{3pt}\noindent 11732\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1798.6\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 13530.6\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent cullin homolog 2 (cul-2). [source:swissprot;acc:q13617]\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 285.684\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 33.45\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 252.234\vspace{3pt}}\\\cline{2-3}\cline{5-7} &\parbox{\wcB}{\vspace{3pt}\noindent putative breast adenocarcinoma marker (32kd). [source:refseq;acc:nm\_014453]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&&\parbox{\wcE}{\vspace{3pt}\noindent 94\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.21277\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 114\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent trans-prenyltransferase; polyprenyl pyrophosphate synthetase. [source:refseq;acc:nm\_014317]\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 9411.34\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.18152\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 11119.7\vspace{3pt}}\\\cline{1-2}\cline{5-7} \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 128\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent 60s ribosomal protein l39. [source:swissprot;acc:p02404]\vspace{3pt}}&&&\parbox{\wcE}{\vspace{3pt}\noindent 11564.4\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.18073\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 9794.29\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent associated molecule with the sh3 domain of stam. [source:refseq;acc:nm\_006463]\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 94\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.21277\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 114\vspace{3pt}}\\\cline{2-3}\cline{5-7} &\parbox{\wcB}{\vspace{3pt}\noindent presenilin 1 (ps-1) (s182 protein). [source:swissprot;acc:p49768]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&&\parbox{\wcE}{\vspace{3pt}\noindent 285.684\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 33.45\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 252.234\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent ret finger protein 2 (leukemia associated protein 5) (b-cell chronic lymphocytic leukemia tumor suppressor leu5) (putative tumor suppressor rfp2) (tripartite motif protein 13). [source:swissprot;acc:o60858]\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 9722.71\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1771.09\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 11493.8\vspace{3pt}}\\\cline{1-2}\cline{5-7} \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 129\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent 60s ribosomal protein l39. [source:swissprot;acc:p02404]\vspace{3pt}}&&&\parbox{\wcE}{\vspace{3pt}\noindent 11564.4\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1770.11\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 9794.29\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent cullin homolog 1 (cul-1). [source:swissprot;acc:q13616]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 285.684\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 33.45\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 252.234\vspace{3pt}}\\\cline{2-7} &\parbox{\wcB}{\vspace{3pt}\noindent isoleucyl-trna synthetase, cytoplasmic (ec 6.1.1.5) (isoleucine--trna ligase) (ilers) (irs). [source:swissprot;acc:p41252]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 14222.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.17945\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 12058.6\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent neuroendocrine differentiation factor; comparative gene identification transcript 149. [source:refseq;acc:nm\_016079]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 94\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.21277\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 114\vspace{3pt}}\\\cline{1-2}\cline{4-7} \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 130\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent enigma protein; lim domain protein. [source:refseq;acc:nm\_005451]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 14476.2\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.17914\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 17069.5\vspace{3pt}}\\\cline{2-7} &\parbox{\wcB}{\vspace{3pt}\noindent palmitoyl-protein thioesterase 2 precursor (ec 3.1.2.22) (palmitoyl- protein hydrolase 2) (ppt-2) (g14). [source:swissprot;acc:q9umr5]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 242.735\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 33.324\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 276.059\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent potassium voltage-gated channel, shal-related subfamily, member 2; voltage-sensitive potassium channel; voltage-gated potassium channel kv4.2. [source:refseq;acc:nm\_012281]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 14922.7\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1748.2\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 13174.5\vspace{3pt}}\\\cline{2-7} &\parbox{\wcB}{\vspace{3pt}\noindent protein hspc134 (protein cda04). [source:swissprot;acc:q9by43]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 94\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.21277\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 114\vspace{3pt}}\\\cline{1-2}\cline{4-7} \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 131\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent dna mismatch repair protein mlh1 (mutl protein homolog 1). [source:swissprot;acc:p40692]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 8375.43\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.17887\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 9873.58\vspace{3pt}}\\\cline{2-7} &\parbox{\wcB}{\vspace{3pt}\noindent egf-like-domain, multiple 7; neu1 protein. [source:refseq;acc:nm\_016215]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 242.718\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 33.3\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 276.018\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent integral membrane protein cii-3b. [source:sptrembl;acc:o75609]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 14951.6\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1747.4\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 13204.2\vspace{3pt}}\\\cline{2-7} &\parbox{\wcB}{\vspace{3pt}\noindent son protein (son3) (negative regulatory element-binding protein) (nre- binding protein) (dbp-5) (bax antagonist selected in saccharomyces 1) (bass1) (protein c21orf50). [source:swissprot;acc:p18583]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 294.053\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.21228\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 242.562\vspace{3pt}}\\\cline{1-3}\cline{5-7} \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 132\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent dj820b18.1 (similar to nuclear cap binding protein) (fragment). [source:sptrembl;acc:q8wwk2]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&&\parbox{\wcE}{\vspace{3pt}\noindent 229.406\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 32.711\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 196.695\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent myosin va (myosin 5a) (dilute myosin heavy chain, non-muscle) (myosin heavy chain 12) (myoxin). [source:swissprot;acc:q9y4i1]\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 10883\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1739.8\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 12622.8\vspace{3pt}}\\\cline{2-3}\cline{5-7} &\parbox{\wcB}{\vspace{3pt}\noindent rna helicase-related protein; rna helicase-like protein; sf3b125 dead-box protein. [source:refseq;acc:nm\_007372]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&&\parbox{\wcE}{\vspace{3pt}\noindent 19048\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.1754\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 22389\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent tob2 protein (transducer of erbb-2 2). [source:swissprot;acc:q14106]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 350\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.2069\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 290\vspace{3pt}}\\\cline{1-2}\cline{4-7} \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 133\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent alpha-parvin (calponin-like integrin-linked kinase binding protein) (ch-ilkbp). [source:swissprot;acc:q9nvd7]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 6814\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.17537\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 8009\vspace{3pt}}\\\cline{2-7} &\parbox{\wcB}{\vspace{3pt}\noindent formin binding protein 3; fas-ligand associated factor 1; huntingtin-interacting protein a; ny-ren-6 antigen. [source:refseq;acc:nm\_017892]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 226.887\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 32.167\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 194.72\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent mms19-like (met18 homolog, s. cerevisiae); homolog of yeast mms19; mms19 (met18 s. cerevisiae)-like. [source:refseq;acc:nm\_022362]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 17144.8\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1739.2\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 15405.6\vspace{3pt}}\\\cline{2-7} &\parbox{\wcB}{\vspace{3pt}\noindent tob1 protein (transducer of erbb-2 1). [source:swissprot;acc:p50616]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 350\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.2069\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 290\vspace{3pt}}\\\cline{1-2}\cline{4-7} \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 134\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent cytochrome p450 4f8 (ec 1.14.14.1) (cypivf8). [source:swissprot;acc:p98187]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 12314.9\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.17404\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 10489.3\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent dab2 interacting protein; ngap-like protein; doc-2/dab2 interactive protein. [source:refseq;acc:nm\_032552]\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 350\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.2069\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 290\vspace{3pt}}\\\cline{2-3}\cline{5-7} &\parbox{\wcB}{\vspace{3pt}\noindent huntingtin-interacting protein hypa/fbp11 (fragment). [source:sptrembl;acc:o75404]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&&\parbox{\wcE}{\vspace{3pt}\noindent 226.884\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 32.094\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 194.79\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent signal recognition particle 9 kda protein (srp9). [source:swissprot;acc:p49458]\vspace{3pt}}&&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 12157.6\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1732.7\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 13890.3\vspace{3pt}}\\\cline{1-2}\cline{5-7} \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 135\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent bloom's syndrome protein (ec 3.6.1.-) (recq protein-like 3) (dna helicase, recq-like, type 2). [source:swissprot;acc:p54132]\vspace{3pt}}&&&\parbox{\wcE}{\vspace{3pt}\noindent 8871.11\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1732.09\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 10603.2\vspace{3pt}}\\\cline{2-3}\cline{5-7} &\parbox{\wcB}{\vspace{3pt}\noindent cytochrome p450 4f2 (ec 1.14.13.30) (cypivf2) (leukotriene-b4 omega- hydroxylase) (leukotriene-b4 20-monooxygenase) (cytochrome p450- ltb-omega). [source:swissprot;acc:p78329]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&&\parbox{\wcE}{\vspace{3pt}\noindent 12314.9\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.17404\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 10489.3\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent cytoplasmic polyadenylation element binding protein 4. [source:refseq;acc:nm\_030627]\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 350\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.2069\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 290\vspace{3pt}}\\\cline{2-3}\cline{5-7} &\parbox{\wcB}{\vspace{3pt}\noindent forkhead box p4; fork head-related protein like a; winged-helix repressor foxp4. [source:refseq;acc:nm\_138457]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent 263.215\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 31.808\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 231.407\vspace{3pt}}\\\hline \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 136\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent cytochrome p450 4f12 (ec 1.14.14.1) (cypivf12). [source:swissprot;acc:q9hcs2]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 12335.3\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.17403\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 10506.8\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent cytoplasmic polyadenylation element binding protein 3. [source:refseq;acc:nm\_014912]\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 350\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.2069\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 290\vspace{3pt}}\\\cline{2-3}\cline{5-7} &\parbox{\wcB}{\vspace{3pt}\noindent forkhead box protein p1 (hspc215). [source:swissprot;acc:q9h334]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&&\parbox{\wcE}{\vspace{3pt}\noindent 263.215\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 31.808\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 231.407\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent polyposis locus protein 1-like 1; likely ortholog of mouse polyposis locus protein 1-like 1. [source:refseq;acc:nm\_138393]\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 12759.4\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1730.6\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 11028.8\vspace{3pt}}\\\cline{1-3}\cline{5-7} \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 137\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent cytochrome p450 4f11 (ec 1.14.14.1) (cypivf11). [source:swissprot;acc:q9hbi6]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent 12328.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.17403\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 10501\vspace{3pt}}\\\cline{2-7} &\parbox{\wcB}{\vspace{3pt}\noindent forkhead box protein p3 (zinc finger protein jm2) (scurfin). [source:swissprot;acc:q9bzs1]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 263.191\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 31.797\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 231.394\vspace{3pt}}\\\cline{2-2}\cline{4-7} &\parbox{\wcB}{\vspace{3pt}\noindent maspin precursor (protease inhibitor 5). [source:swissprot;acc:p36952]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 16853\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1730\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 15123\vspace{3pt}}\\\cline{2-7} &\parbox{\wcB}{\vspace{3pt}\noindent ras gtpase-activating protein ngap (ras protein activator like 1). [source:swissprot;acc:q9ujf2]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 1\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent 350\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.2069\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 290\vspace{3pt}}\\\cline{1-3}\cline{5-7} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 138\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent cg9578-like; yeast ypr037w and worm c02c2.6 predicted proteins-like. [source:refseq;acc:nm\_152902]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&&\parbox{\wcE}{\vspace{3pt}\noindent 174.667\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 30.889\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 205.556\vspace{3pt}}\\\cline{2-7} &\parbox{\wcB}{\vspace{3pt}\noindent likely ortholog of rat cytochrome p450 4x1. [source:refseq;acc:nm\_178033]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 12384.7\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.17397\vspace{3pt}}&\parbox{\wcG}{\vspace{3pt}\noindent 10549.4\vspace{3pt}}\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/