Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Rank Gene description Network Comparison Type Value Type Interaction Map Filtered green red network_comparison
Results: HTML CSV LaTeX Showing element 51 to 100 of 3730 in total
Network Comparison Type: Divided
Value Type: Ranked
Interaction Map: High confidence
\def\wcA{0.14285714285714\textwidth} \def\wcB{0.14285714285714\textwidth} \def\wcC{0.14285714285714\textwidth} \def\wcD{0.14285714285714\textwidth} \def\wcE{0.14285714285714\textwidth} \def\wcF{0.14285714285714\textwidth} \begin{longtable}{|c|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Filtered\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 26\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent dystrobrevin binding protein 1; dysbindin. [source:refseq;acc:nm\_032122]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7533.33\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 12128.3\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.60995\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent pantothenate kinase 3 (ec 2.7.1.33) (pantothenic acid kinase 3) (hpank3). [source:swissprot;acc:q9h999]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 44\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 58\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 1.31818\vspace{3pt}}}\\\cline{1-2} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 27\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent mitochondrial solute carrier protein. [source:refseq;acc:nm\_145305]\vspace{3pt}}&&&&\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent ptd016 protein. [source:refseq;acc:nm\_016125]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 11234\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 18050\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.60673\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 28\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent cyclic-amp-dependent transcription factor atf-3 (activating transcription factor 3). [source:swissprot;acc:p18847]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 153.671\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 201.949\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.31416\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent p28 ing5. [source:refseq;acc:nm\_032329]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 7562.05\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 12124.8\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.60337\vspace{3pt}}\\\cline{1-2}\cline{4-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 29\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent phenylethanolamine n-methyltransferase (ec 2.1.1.28) (pnmtase) (noradrenaline n-methyltransferase). [source:swissprot;acc:p11086]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 11625\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 7395\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.57201\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent uncharacterized hematopoietic stem/progenitor cells protein mds026. [source:sptrembl;acc:q9nz48]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 243.678\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 187.458\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.29991\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 30\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent beta-carotene dioxygenase 2; putative b,b-carotene-9',10'-dioxygenase. [source:refseq;acc:nm\_031938]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 11625\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 7395\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.57201\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent serine/threonine protein phosphatase 2a, 55 kda regulatory subunit b, alpha isoform (pp2a, subunit b, b-alpha isoform) (pp2a, subunit b, b55-alpha isoform) (pp2a, subunit b, pr55-alpha isoform) (pp2a, subunit b, r2-alpha isoform). [source:swissprot;acc:q00007]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 243.678\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 187.457\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.29991\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 31\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent leucine rich repeat (in flii) interacting protein 1. [source:refseq;acc:nm\_004735]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5266.67\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 8082.33\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.53462\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent serine/threonine protein phosphatase 2a, 55 kda regulatory subunit b, beta isoform (pp2a, subunit b, b-beta isoform) (pp2a, subunit b, b55- beta isoform) (pp2a, subunit b, pr55-beta isoform) (pp2a, subunit b, r2-beta isoform). [source:swissprot;acc:q00005]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 243.677\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 187.458\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.2999\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 32\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent importin 9. [source:refseq;acc:nm\_018085]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 8691.76\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 13292.2\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.52929\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent serine/threonine protein phosphatase 2a, 55 kda regulatory subunit b, gamma isoform (pp2a, subunit b, b-gamma isoform) (pp2a, subunit b, b55-gamma isoform) (pp2a, subunit b, pr55-gamma isoform) (pp2a, subunit b, r2-gamma isoform) (imypno1). [source:swissprot;acc:q9y2t4]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 243.673\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 187.462\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.29985\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 33\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent nucleosome assembly protein 1-like 4 (nucleosome assembly protein 2) (nap2). [source:swissprot;acc:q99733]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 8691.76\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 13292.2\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.52929\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent serine/threonine protein phosphatase 2a, 65 kda regulatory subunit a, beta isoform (pp2a, subunit a, pr65-beta isoform) (pp2a, subunit a, r1-beta isoform). [source:swissprot;acc:p30154]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 242.742\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 188.688\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.28647\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 34\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent microtubule-associated protein, rp/eb family, member 2; t-cell activation protein, eb1 family; apc-binding protein eb1. [source:refseq;acc:nm\_014268]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 17173.8\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 11284\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.52196\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent serine/threonine protein phosphatase 2a, 65 kda regulatory subunit a, alpha isoform (pp2a, subunit a, pr65-alpha isoform) (pp2a, subunit a, r1-alpha isoform) (medium tumor antigen-associated 61 kda protein). [source:swissprot;acc:p30153]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 242.453\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 189.07\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.28235\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 35\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent nuclear dna-binding protein; small unique nuclear receptor corepressor; c1d dna-binding protein. [source:refseq;acc:nm\_006333]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4871.6\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 3208.8\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.5182\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent nuclear transcription factor y subunit gamma (nf-y protein chain c) (nuclear factor yc) (nf-yc) (ccaat-binding transcription factor subunit c) (cbf-c) (transactivator hsm-1/2). [source:swissprot;acc:q13952]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 204.309\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 260.532\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 1.27519\vspace{3pt}}}\\\cline{1-2} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 36\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent ccaat-binding transcription factor subunit b (cbf-b) (nf-y protein chain a) (nf-ya) (caat-box dna binding protein subunit a). [source:swissprot;acc:p23511]\vspace{3pt}}&&&&\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein beta subunit-like protein 1 (g protein beta-subunit like protein 1) (wd40 repeat containing protein deleted in vcfs) (wdvcf protein) (fksg1 protein) (dgcrk3). [source:swissprot;acc:q9byb4]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 14964\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 22422\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.4984\vspace{3pt}}\\\cline{1-2}\cline{4-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 37\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent dj570f3.6 (novel protein similar to lysophospholipase ii (lypla2)). [source:sptrembl;acc:q9uge0]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 2582\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 3859\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.49458\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent protein phosphatase 1, regulatory (inhibitor) subunit 14a; 17-kda pkc-potentiated inhibitory protein of pp1. [source:refseq;acc:nm\_033256]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 253\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 322\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.27273\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 38\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent cell division protein kinase 8 (ec 2.7.1.-) (protein kinase k35). [source:swissprot;acc:p49336]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 10771\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 7230\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.48976\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent microfibril-associated glycoprotein 4 precursor. [source:swissprot;acc:p55083]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 253\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 322\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.27273\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 39\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent ero1-like. [source:refseq;acc:nm\_014584]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 20536\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 13853\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.48242\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent protein phosphatase 1, regulatory subunit 14d; pkc-dependent pp1 inhibitory protein. [source:refseq;acc:nm\_017726]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 253\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 322\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 1.27273\vspace{3pt}}}\\\cline{1-2} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 40\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent ficolin 2 precursor (collagen/fibrinogen domain-containing protein 2) (ficolin-b) (ficolin b) (serum lectin p35) (ebp-37) (hucolin) (l- ficolin). [source:swissprot;acc:q15485]\vspace{3pt}}&&&&\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent filamin a (alpha-filamin) (filamin 1) (endothelial actin-binding protein) (abp-280) (nonmuscle filamin). [source:swissprot;acc:p21333]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 5699\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 3845\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.48218\vspace{3pt}}\\\cline{1-2}\cline{4-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 41\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent 60s ribosomal protein l21. [source:swissprot;acc:p46778]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 6758.83\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 9994.33\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.47871\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent protein phosphatase 1, regulatory (inhibitor) subunit 14c; serologically defined breast cancer antigen ny-br-81; pkc-potentiated pp1 inhibitory protein. [source:refseq;acc:nm\_030949]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 253\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 322\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.27273\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 42\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent adp,atp carrier protein, liver isoform t2 (adp/atp translocase 3) (adenine nucleotide translocator 3) (ant 3). [source:swissprot;acc:p12236]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5530.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 8158\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.47509\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent proto-oncogene protein c-fos (cellular oncogene fos) (g0/g1 switch regulatory protein 7). [source:swissprot;acc:p01100]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 160.957\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 204.641\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.2714\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 43\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent glutathione s-transferase theta 2 (ec 2.5.1.18) (gst class-theta). [source:swissprot;acc:p30712]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 8356.02\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 12143.8\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.4533\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent jun dimerization protein. [source:refseq;acc:nm\_130469]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 160.957\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 204.641\vspace{3pt}}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.2714\vspace{3pt}}\\\cline{1-2}\cline{4-4}\cline{6-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 44\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent fos-related antigen 2. [source:swissprot;acc:p15408]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 161.046\vspace{3pt}}&&\parbox{\wcF}{\vspace{3pt}\noindent 1.2707\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent serpin b12. [source:swissprot;acc:q96p63]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 21138.6\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 14604.2\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.44743\vspace{3pt}}\\\cline{1-2}\cline{4-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 45\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent hurpin (hacat uv-repressible serpin) (protease inhibitor 13) (headpin) (serpin b13). [source:swissprot;acc:q9uiv8]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 21113.7\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 14592\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.44694\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent protein fosb (g0/g1 switch regulatory protein 3). [source:swissprot;acc:p53539]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 161.051\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 204.641\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.27066\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 46\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent 60s ribosomal protein l37a. [source:swissprot;acc:p12751]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 18499.2\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 12941.7\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.42943\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent fos-related antigen 1 (fra-1). [source:swissprot;acc:p15407]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 161.068\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 204.642\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.27053\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 47\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent 25-hydroxyvitamin d-1 alpha hydroxylase, mitochondrial precursor (ec 1.14.-.-) (25-ohd-1 alpha-hydroxylase) (25-hydroxyvitamin d3 1- alpha-hydroxylase) (vd3 1a hydroxylase) (p450c1 alpha) (p450vd1- alpha). [source:swissprot;acc:o15528]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 18499.2\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 12941.7\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.42943\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent gbp protein isoform a. [source:refseq;acc:nm\_017870]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 256.492\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 325.586\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.26938\vspace{3pt}}\\\cline{1-2}\cline{4-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 48\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent gaba(a) receptor-associated protein; gaba(a)-receptor-associated protein. [source:refseq;acc:nm\_007278]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 83.0461\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 65.4586\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.26868\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent nadh-ubiquinone oxidoreductase 13 kda-b subunit (ec 1.6.5.3) (ec 1.6.99.3) (complex i-13kd-b) (ci-13kd-b) (complex i subunit b13). [source:swissprot;acc:q16718]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6909\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 9830\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.42278\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 49\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent beta-arrestin 2 (arrestin, beta 2). [source:swissprot;acc:p32121]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 105\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 133\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.26667\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent brain protein 16. [source:refseq;acc:nm\_016458]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4854.99\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 6890.54\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.41927\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 50\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent beta-arrestin 1 (arrestin, beta 1). [source:swissprot;acc:p49407]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 105\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 133\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.26667\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent cartilage oligomeric matrix protein precursor (comp). [source:swissprot;acc:p49747]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 13091.4\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 9249.73\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.41533\vspace{3pt}}\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/