Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 451 to 500 of 3228 in total
Value Type: Measured
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1
\def\wcA{0.16666666666667\textwidth} \def\wcB{0.16666666666667\textwidth} \def\wcC{0.16666666666667\textwidth} \def\wcD{0.16666666666667\textwidth} \def\wcE{0.16666666666667\textwidth} \begin{longtable}{|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent 451\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent n-myc proto-oncogene protein. [source:swissprot;acc:p04198]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4889.71\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5610.69\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.14745\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 452\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent zinc finger-like protein 9. [source:refseq;acc:nm\_033414]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 3760.8\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 4315.06\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.14738\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 453\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent membrane-associated transporter protein (aim-1 protein) (melanoma antigen aim1). [source:swissprot;acc:q9umx9]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 454\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein-like 1 (gtp-binding protein hsr1). [source:swissprot;acc:p36915]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 455\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ga binding protein alpha chain (gabp-alpha subunit) (transcription factor e4tf1-60) (nuclear respiratory factor-2 subunit alpha). [source:swissprot;acc:q06546]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 4890.51\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5610.95\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.14731\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 456\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ga binding protein beta-2 chain (gabp-beta-2 subunit) (transcription factor e4tf1-47) (gapbp-2) (nuclear respiratory factor-2 subunit gamma). [source:swissprot;acc:q06545]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 457\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent nadh-ubiquinone oxidoreductase 23 kda subunit, mitochondrial precursor (ec 1.6.5.3) (ec 1.6.99.3) (complex i-23kd) (ci-23kd) (tyky subunit). [source:swissprot;acc:o00217]\vspace{3pt}}&&&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 458\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent elongation of very long chain fatty acids protein 1 (cgi-88). [source:swissprot;acc:q9bw60]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4890.55\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5610.96\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 459\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent myc proto-oncogene protein (c-myc). [source:swissprot;acc:p01106]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4892.16\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5611.48\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.14704\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 460\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent nnp-1 protein (novel nuclear protein 1) (nucleolar protein nop52) (nop52) (d21s2056e). [source:swissprot;acc:p56182]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3790.11\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4346.98\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.14693\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 461\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent grb2-related adaptor protein. [source:swissprot;acc:q13588]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5986.65\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6865.68\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.14683\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 462\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ret finger protein 2 (leukemia associated protein 5) (b-cell chronic lymphocytic leukemia tumor suppressor leu5) (putative tumor suppressor rfp2) (tripartite motif protein 13). [source:swissprot;acc:o60858]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 11383.2\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 9926.61\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.14674\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 463\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent atp-dependent rna helicase ddx18 (dead-box protein 18) (myc-regulated dead-box protein) (mrdb). [source:swissprot;acc:q9nvp1]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3720.18\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4264.46\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.1463\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 464\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent histone acetyltransferase type b subunit 2 (retinoblastoma binding protein p46) (retinoblastoma-binding protein 7) (rbbp-7). [source:swissprot;acc:q16576]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4858.96\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5568.85\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.1461\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 465\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent transcription factor e2f1 (e2f-1) (retinoblastoma binding protein 3) (rbbp-3) (prb-binding protein e2f-1) (pbr3) (retinoblastoma-associated protein 1) (rbap-1). [source:swissprot;acc:q01094]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 3847.31\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 4409.22\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.14605\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 466\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent transcription factor e2f2 (e2f-2). [source:swissprot;acc:q14209]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 467\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent metastasis-associated protein mta1. [source:swissprot;acc:q13330]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4864.25\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5573.62\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.14583\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 468\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent chromatin assembly factor 1 subunit c (caf-1 subunit c) (chromatin assembly factor i p48 subunit) (caf-i 48 kda subunit) (caf-ip48) (retinoblastoma binding protein p48) (retinoblastoma-binding protein 4) (rbbp-4) (msi1 protein homolog). [source:swissprot;acc:q09028]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4869.15\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5578.02\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.14558\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 469\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent proliferating-cell nucleolar antigen p120 (proliferation-associated nucleolar protein p120). [source:swissprot;acc:p46087]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3831.17\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4388.74\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.14554\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 470\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent block of proliferation 1. [source:swissprot;acc:q14137]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3796.24\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4348.59\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.1455\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 471\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent mitogen-activated protein kinase 12 (ec 2.7.1.37) (extracellular signal-regulated kinase 6) (erk-6) (erk5) (stress-activated protein kinase-3) (mitogen-activated protein kinase p38 gamma) (map kinase p38 gamma). [source:swissprot;acc:p53778]\vspace{3pt}}&\multirow{15}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 9649.61\vspace{3pt}}}&\multirow{15}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 11053.5\vspace{3pt}}}&\multirow{15}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.14549\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 472\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent sphingosine kinase 1 (ec 2.7.1.-) (sk 1) (spk 1). [source:swissprot;acc:q9nya1]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 473\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent udp-n-acetylglucosamine--dolichyl-phosphate n- acetylglucosaminephosphotransferase (ec 2.7.8.15) (gpt) (g1pt) (n-acetylglucosamine-1-phosphate transferase) (glcnac-1-p transferase). [source:swissprot;acc:q9h3h5]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 474\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent rho-gtpase-activating protein 7 (rho-type gtpase-activating protein 7) (deleted in liver cancer 1 protein) (dlc-1) (hp protein) (star-related lipid transfer protein 12) (stard12) (start domain-containing protein 12). [source:swissprot;acc:q96qb1]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 475\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent map kinase-activated protein kinase 2 (ec 2.7.1.-) (mapk-activated protein kinase 2) (mapkap kinase 2) (mapkapk-2). [source:swissprot;acc:p49137]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 476\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent neuronal acetylcholine receptor protein, alpha-6 chain precursor. [source:swissprot;acc:q15825]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 477\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent nitrogen fixation cluster-like. [source:refseq;acc:nm\_014301]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 478\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent star-related lipid transfer protein 13 (stard13) (start domain- containing protein 13) (46h23.2). [source:swissprot;acc:q9y3m8]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 479\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent star-related lipid transfer protein 8 (stard8) (start domain- containing protein 8). [source:swissprot;acc:q92502]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 480\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent neuronal acetylcholine receptor protein, alpha-2 chain precursor. [source:swissprot;acc:q15822]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 481\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent mitogen-activated protein kinase-activated protein kinase 3; mapkap kinase 3. [source:refseq;acc:nm\_004635]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 482\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent mitogen-activated protein kinase 14 (ec 2.7.1.37) (mitogen-activated protein kinase p38alpha) (map kinase p38alpha) (cytokine suppressive anti-inflammatory drug binding protein) (csaid binding protein) (csbp) (max-interacting protein 2) (map kinase mxi2) (sapk2a). [source:swissprot;acc:q16539]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 483\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent neuronal acetylcholine receptor protein, alpha-4 chain precursor. [source:swissprot;acc:p43681]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 484\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent neuronal acetylcholine receptor protein, alpha-3 chain precursor. [source:swissprot;acc:p32297]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 485\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent sphingosine kinase 2 (ec 2.7.1.-) (sk 2) (spk 2). [source:swissprot;acc:q9nra0]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 486\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent stem cell growth factor; lymphocyte secreted c-type lectin; lymphocyte secreted c-type lectin. [source:refseq;acc:nm\_002975]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 10908.6\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 12491.8\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.14513\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 487\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent pyrroline 5-carboxylate reductase isoform. [source:refseq;acc:nm\_013328]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5277.4\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6042.88\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.14505\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 488\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent c-type lectin superfamily member 1 precursor (cartilage-derived c-type lectin). [source:swissprot;acc:o75596]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 10872.4\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 12447\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.14483\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 489\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent pyrroline-5-carboxylate reductase (ec 1.5.1.2) (p5cr) (p5c reductase). [source:swissprot;acc:p32322]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5281.11\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6044.61\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.14457\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 490\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent protein phosphatase 1, regulatory (inhibitor) subunit 13b; apoptosis-stimulating protein of p53, 1. [source:refseq;acc:nm\_015316]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 15274.9\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 13346.9\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.14445\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 491\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent neuron navigator 2 isoform l; retinoic acid inducible in neuroblastoma; pore membrane and/or filament interacting like protein 2; helicase helad1. [source:refseq;acc:nm\_145117]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5980.15\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6843.48\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.14437\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 492\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent neuron navigator 1; neuron navigator-1; pore membrane and/or filament interacting like protein 3. [source:refseq;acc:nm\_020443]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5979.94\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6842.76\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.14429\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 493\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent neuron navigator 3; pore membrane and/or filament interacting like protein 1; steerin 3. [source:refseq;acc:nm\_014903]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5979.95\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6842.78\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 494\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent e2a-pbx1-associated protein; putative 47 kda protein. [source:refseq;acc:nm\_020140]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5979.93\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6842.72\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.14428\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 495\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent tetranectin precursor (tn) (plasminogen-kringle 4 binding protein). [source:swissprot;acc:p05452]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 10804.7\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 12363.6\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 496\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent nostrin. [source:refseq;acc:nm\_052946]\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 4682.87\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 4093.05\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.1441\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 497\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent eap30 subunit of ell complex. [source:refseq;acc:nm\_007241]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 498\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent liv-1 protein, estrogen regulated. [source:refseq;acc:nm\_012319]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 499\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent glutamate decarboxylase, 65 kda isoform (ec 4.1.1.15) (gad-65) (65 kda glutamic acid decarboxylase). [source:swissprot;acc:q05329]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 500\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent gamma-soluble nsf attachment protein (snap-gamma) (n-ethylmaleimide- sensitive factor attachment protein, gamma). [source:swissprot;acc:q99747]\vspace{3pt}}&&&\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/