Scientific

MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Rank Gene Hugo description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 383 to 432 of 3228 in total 
Value Type: Ranked
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1

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\def\wcB{0.14285714285714\textwidth}
\def\wcC{0.14285714285714\textwidth}
\def\wcD{0.14285714285714\textwidth}
\def\wcE{0.14285714285714\textwidth}
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\begin{longtable}{|c|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
Hugo\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
383\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
RBM39\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
rna-binding region containing protein 2 (hepatocellular carcinoma protein 1) (splicing factor hcc1). [source:swissprot;acc:q14498]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
237.862\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
217.739\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.09242\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
384\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
E2F1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
transcription factor e2f1 (e2f-1) (retinoblastoma binding protein 3) (rbbp-3) (prb-binding protein e2f-1) (pbr3) (retinoblastoma-associated protein 1) (rbap-1). [source:swissprot;acc:q01094]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
266.421\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
244.236\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.09083\vspace{3pt}}}\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
385\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
E2F2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
transcription factor e2f2 (e2f-2). [source:swissprot;acc:q14209]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
386\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
RPS14\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
40s ribosomal protein s14 (pro2640). [source:swissprot;acc:p06366]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
242.238\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
264.11\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.09029\vspace{3pt}}}\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
387\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
40s ribosomal protein s18 (ke-3) (ke3). [source:swissprot;acc:p25232]\vspace{3pt}}&&&\\\cline{1-1}\cline{3-6}
\parbox{\wcA}{\vspace{3pt}\noindent
388\vspace{3pt}}&&\parbox{\wcC}{\vspace{3pt}\noindent
small nuclear ribonucleoprotein e (snrnp-e) (sm protein e) (sm-e) (sme). [source:swissprot;acc:p08578]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
227.575\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
208.756\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.09015\vspace{3pt}}}\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
389\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
SNRPF\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
small nuclear ribonucleoprotein f (snrnp-f) (sm protein f) (sm-f) (smf). [source:swissprot;acc:q15356]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
390\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
MRPL13\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
60s ribosomal protein l13, mitochondrial (l13mt). [source:swissprot;acc:q9byd1]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
241.828\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
263.62\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.09011\vspace{3pt}}}\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
391\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
RPS16\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
40s ribosomal protein s16. [source:swissprot;acc:p17008]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
392\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
RPL13A\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
60s ribosomal protein l13a (23 kda highly basic protein). [source:swissprot;acc:p40429]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
241.83\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
263.615\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.09008\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
393\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
TXNL4A\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
spliceosomal u5 snrnp-specific 15 kda protein (dim1 protein homolog) (thioredoxin-like u5 snrnp protein u5-15kd). [source:swissprot;acc:o14834]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
225.719\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
207.072\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.09005\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
394\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
DPP9\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
dipeptidylpeptidase 9; dipeptidyl peptidase 9; dipeptidyl peptidase iv-related protein-2. [source:refseq;acc:nm\_139159]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
218.827\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
238.407\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.08948\vspace{3pt}}}\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
395\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
DPP8\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
dipeptidyl peptidase 8 isoform 2; dipeptidyl peptidase 8. [source:refseq;acc:nm\_017743]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
396\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
putative eukaryotic translation initiation factor 1a (eif-1a) (eif- 4c). [source:swissprot;acc:o75642]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
240.801\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
262.34\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.08945\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
397\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
CCT3\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
t-complex protein 1, gamma subunit (tcp-1-gamma) (cct-gamma). [source:swissprot;acc:p49368]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
110.689\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
101.613\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.08932\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
398\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ITGB1BP3\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
muscle-specific beta 1 integrin binding protein. [source:refseq;acc:nm\_014446]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
218.818\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
238.358\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.0893\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
399\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
CLTC\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
clathrin heavy chain 1 (clh-17). [source:swissprot;acc:q00610]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
207.889\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
226.226\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.08821\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
400\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
PDCL\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
phosducin-like protein (phlp). [source:swissprot;acc:q13371]\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
207.908\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
226.218\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.08807\vspace{3pt}}}\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
401\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
RPA1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
replication protein a 70 kda dna-binding subunit (rp-a) (rf-a) (replication factor-a protein 1) (single-stranded dna-binding protein). [source:swissprot;acc:p27694]\vspace{3pt}}&&&\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
402\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
RPA2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
replication protein a 32 kda subunit (rp-a) (rf-a) (replication factor-a protein 2). [source:swissprot;acc:p15927]\vspace{3pt}}&&&\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
403\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
PDC\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
phosducin (phd) (33 kda phototransducing protein) (meka protein). [source:swissprot;acc:p20941]\vspace{3pt}}&&&\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
404\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
RAD52\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
dna repair protein rad52 homolog. [source:swissprot;acc:p43351]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
405\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
CLTCL1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
clathrin heavy chain 2 (clh-22). [source:swissprot;acc:p53675]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
207.931\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
226.209\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.0879\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
406\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
transcription factor dp-1 (e2f dimerization partner 1) (drtf1- polypeptide-1) (drtf1). [source:swissprot;acc:q14186]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
265.634\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
244.304\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.08731\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
407\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
MRPS9\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
28s ribosomal protein s9, mitochondrial precursor (mrp-s9). [source:swissprot;acc:p82933]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
239.75\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
260.544\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.08673\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
408\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
CEBPZ\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
ccaat-box-binding transcription factor (ccaat-binding factor) (cbf). [source:swissprot;acc:q03701]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
255.112\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
234.804\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.08649\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
409\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
POLR1E\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
rna polymerase i associated factor 53. [source:refseq;acc:nm\_022490]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
241.045\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
261.874\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.08641\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
410\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
tfiih basal transcription factor complex p44 subunit (basic transcription factor 2 44 kda subunit) (btf2-p44) (general transcription factor iih polypeptide 2). [source:swissprot;acc:q13888]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
233.376\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
253.539\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.0864\vspace{3pt}}}\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
411\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
GTF2H1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
tfiih basal transcription factor complex p62 subunit (basic transcription factor 62 kda subunit) (btf2-p62) (general transcription factor iih polypeptide 1). [source:swissprot;acc:p32780]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
412\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
UQCRFSL1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial precursor (ec 1.10.2.2) (rieske iron-sulfur protein) (risp). [source:swissprot;acc:p47985]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
240.788\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
261.416\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.08567\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
413\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
POLR1C\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
dna-directed rna polymerase i 40 kda polypeptide (ec 2.7.7.6) (rpa40) (rpa39). [source:swissprot;acc:o15160]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
240.913\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
261.45\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.08525\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
414\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
KATNA1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
katanin p60 subunit a 1. [source:refseq;acc:nm\_007044]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
232.431\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
252.238\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.08522\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
415\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
KATNB1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
katanin p80 subunit b 1; katanin (80 kda); katanin p80 (wd40-containing) subunit b 1. [source:refseq;acc:nm\_005886]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
232.382\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
252.166\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.08514\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
416\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
POLR1B\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
dna-directed rna polymerase i 135 kda polypeptide (ec 2.7.7.6) (rna polymerase i subunit 2) (rpa135). [source:swissprot;acc:q9h9y6]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
240.6\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
261.041\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.08496\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
417\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
SETMAR\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
set domain and mariner transposase fusion gene. [source:refseq;acc:nm\_006515]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
233.539\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
253.197\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.08417\vspace{3pt}}}\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
418\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
CLEC4M\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
cd209 antigen-like; putative type ii membrane protein. [source:refseq;acc:nm\_014257]\vspace{3pt}}&&&\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
419\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
FCER2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
low affinity immunoglobulin epsilon fc receptor (lymphocyte ige receptor) (fc-epsilon-rii) (cd23) (blast-2) (immunoglobulin e-binding factor). [source:swissprot;acc:p06734]\vspace{3pt}}&&&\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
420\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
CD209\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
cd209 antigen; dendritic cell-specific icam3-grabbing nonintegrin. [source:refseq;acc:nm\_021155]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
421\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
TFIP11\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
tuftelin-interacting protein 11 (hspc006). [source:swissprot;acc:q9ubb9]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
223.202\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
205.9\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.08403\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
422\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
RAB37\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
ras-related protein rab-37. [source:swissprot;acc:q96ax2]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
240.287\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
260.193\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.08284\vspace{3pt}}}\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
423\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
RAB26\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
ras-related protein rab-26. [source:swissprot;acc:q9ulw5]\vspace{3pt}}&&&\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
424\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
POLR2C\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
dna-directed rna polymerase ii 33 kda polypeptide (ec 2.7.7.6) (rpb3) (rna polymerase ii subunit 3) (rpb33) (rpb31). [source:swissprot;acc:p19387]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
425\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
MAX\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
max protein. [source:swissprot;acc:p25912]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
227.828\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
210.561\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.082\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
426\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
DCTN5\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
dynactin 4. [source:refseq;acc:nm\_032486]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
233.142\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
252.253\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.08197\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
427\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
POLR2E\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
dna-directed rna polymerase ii 23 kda polypeptide (ec 2.7.7.6) (rpb25) (xap4) (rpb5) (rpabc1). [source:swissprot;acc:p19388]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
239.977\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
259.525\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.08146\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
428\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
DDX54\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
atp-dependent rna helicase mgc2835; atp-dependent rna helicase; apoptosis related protein apr-5; dead box helicase 97 kda. [source:refseq;acc:nm\_024072]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
253.852\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
234.808\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.0811\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
429\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
POLR3G\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
polymerase (rna) iii (dna directed) (32kd). [source:refseq;acc:nm\_006467]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
239.709\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
259.038\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.08064\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
430\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
LSM5\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
u6 snrna-associated sm-like protein lsm5. [source:swissprot;acc:q9y4y9]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
227.748\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
210.888\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.07995\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
431\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
TRUB1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
trub pseudouridine (psi) synthase homolog 1. [source:refseq;acc:nm\_139169]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
236.245\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
255.113\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.07987\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
432\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ENDOG\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
endonuclease g, mitochondrial precursor (ec 3.1.30.-) (endo g). [source:swissprot;acc:q14249]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
212.547\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
229.411\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.07934\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Hugo is the HGNC identifier if it exists

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/