Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 33 to 82 of 3228 in total
Value Type: Measured
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1
\def\wcA{0.16666666666667\textwidth} \def\wcB{0.16666666666667\textwidth} \def\wcC{0.16666666666667\textwidth} \def\wcD{0.16666666666667\textwidth} \def\wcE{0.16666666666667\textwidth} \begin{longtable}{|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent 33\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-11 subunit. [source:swissprot;acc:p50152]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1835.3\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 896.972\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2.04611\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 34\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(y), alpha subunit (alpha-11). [source:swissprot;acc:p29992]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 1836.71\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 907.546\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2.02382\vspace{3pt}}\\\cline{1-2}\cline{4-5} \parbox{\wcA}{\vspace{3pt}\noindent 35\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(q), alpha subunit. [source:swissprot;acc:p50148]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 907.564\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2.02378\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 36\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(z), alpha subunit (g(x) alpha chain) (gz-alpha). [source:swissprot;acc:p19086]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 1836.76\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 907.741\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2.02344\vspace{3pt}}\\\cline{1-2}\cline{4-5} \parbox{\wcA}{\vspace{3pt}\noindent 37\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(t), alpha-1 subunit (transducin alpha-1 chain). [source:swissprot;acc:p11488]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 907.763\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2.02339\vspace{3pt}}\\\cline{1-2}\cline{4-5} \parbox{\wcA}{\vspace{3pt}\noindent 38\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(t), alpha-2 subunit (transducin alpha-2 chain). [source:swissprot;acc:p19087]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 907.774\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2.02337\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 39\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i), alpha-2 subunit (adenylate cyclase-inhibiting g alpha protein). [source:swissprot;acc:p04899]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1836.8\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 907.903\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2.02312\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 40\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i), alpha-1 subunit (adenylate cyclase-inhibiting g alpha protein). [source:swissprot;acc:p04898]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 1836.81\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 907.978\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 2.02297\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 41\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(k), alpha subunit (g(i) alpha-3). [source:swissprot;acc:p08754]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 42\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein beta subunit 5 (transducin beta chain 5). [source:swissprot;acc:o14775]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1857.32\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 958.237\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.93827\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 43\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(t) beta subunit 3 (transducin beta chain 3). [source:swissprot;acc:p16520]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1881.02\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 1027.36\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.83093\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 44\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(t) beta subunit 1 (transducin beta chain 1). [source:swissprot;acc:p04901]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1931.34\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 1057.39\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.82652\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 45\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein beta subunit 4 (transducin beta chain 4). [source:swissprot;acc:q9hav0]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1926.69\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 1056.02\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.82448\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 46\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent neurogenic differentiation factor 2 (neurod2). [source:swissprot;acc:q15784]\vspace{3pt}}&\multirow{8}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 779.167\vspace{3pt}}}&\multirow{8}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 1390.33\vspace{3pt}}}&\multirow{8}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.78438\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 47\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent chromodomain helicase-dna-binding protein 3 (chd-3) (mi-2 autoantigen 240 kda protein) (mi2-alpha). [source:swissprot;acc:q12873]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 48\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent doc-1 related protein (doc-1r). [source:swissprot;acc:o75956]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 49\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent neurogenic differentiation factor 6 (neurod6) (my051 protein). [source:swissprot;acc:q96nk8]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 50\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent neurogenic differentiation factor 1 (neurod1) (neurod). [source:swissprot;acc:q13562]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 51\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent neurogenic differentiation factor 4 (neurod4). [source:swissprot;acc:q9hd90]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 52\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent chromodomain helicase dna binding protein 5. [source:refseq;acc:nm\_015557]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 53\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent cyclin-dependent kinase 2-associated protein 1 (cdk2-associated protein 1) (putative oral cancer suppressor) (deleted in oral cancer- 1) (doc-1). [source:swissprot;acc:o14519]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 54\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent deltex 2. [source:refseq;acc:nm\_020892]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1618.84\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 2651.88\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.63814\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 55\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent deltex homolog 1; hdx-1. [source:refseq;acc:nm\_004416]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1629.21\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 2662.12\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.63399\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 56\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent t-lak cell-originated protein kinase; spermatogenesis-related protein kinase; pdz-binding kinase; pbk; mapkk-like protein kinase; serine/threonine protein kinase. [source:refseq;acc:nm\_018492]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 1631.67\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 2664.55\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.63302\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 57\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent kh domain containing, rna binding, signal transduction associated 3; sam68-like phosphotyrosine protein, t-star. [source:refseq;acc:nm\_006558]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 58\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent kh domain containing, rna binding, signal transduction associated 1; gap-associated tyrosine phosphoprotein p62 (sam68). [source:refseq;acc:nm\_006559]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 59\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent kh domain-containing, rna-binding, signal transduction-associated protein 2; sam68-like mammalian protein 1. [source:refseq;acc:nm\_152688]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 60\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1,4-alpha-glucan branching enzyme (ec 2.4.1.18) (glycogen branching enzyme) (brancher enzyme). [source:swissprot;acc:q04446]\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 4489.19\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 2765.82\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.6231\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 61\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent glycogen phosphorylase, brain form (ec 2.4.1.1). [source:swissprot;acc:p11216]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 62\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent glycogen phosphorylase, liver form (ec 2.4.1.1). [source:swissprot;acc:p06737]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 63\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent myosin xv (unconventional myosin-15). [source:swissprot;acc:q9ukn7]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 64\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent glycogen phosphorylase, muscle form (ec 2.4.1.1) (myophosphorylase). [source:swissprot;acc:p11217]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 65\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent neuralized-like. [source:refseq;acc:nm\_004210]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1657.68\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 2690.25\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.6229\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 66\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent nadh-ubiquinone oxidoreductase subunit b17.2 (ec 1.6.5.3) (ec 1.6.99.3) (complex i-b17.2) (ci-b17.2) (cib17.2) (13 kda differentiation-associated protein). [source:swissprot;acc:q9ui09]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1991.03\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 3221.38\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.61795\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 67\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent beta-arrestin 2 (arrestin, beta 2). [source:swissprot;acc:p32121]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 6475.5\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 10307.5\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.59177\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 68\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent beta-arrestin 1 (arrestin, beta 1). [source:swissprot;acc:p49407]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 69\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent spermatogenesis associated 6. [source:refseq;acc:nm\_019073]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 70\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent amp deaminase 2 (ec 3.5.4.6) (amp deaminase isoform l). [source:swissprot;acc:q01433]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 71\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent serine/threonine protein phosphatase 2a, 55 kda regulatory subunit b, alpha isoform (pp2a, subunit b, b-alpha isoform) (pp2a, subunit b, b55-alpha isoform) (pp2a, subunit b, pr55-alpha isoform) (pp2a, subunit b, r2-alpha isoform). [source:swissprot;acc:q00007]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4556.78\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 2945.26\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.54716\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 72\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent uncharacterized hematopoietic stem/progenitor cells protein mds026. [source:sptrembl;acc:q9nz48]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4556.79\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 2945.28\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.54715\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 73\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent serine/threonine protein phosphatase 2a, 55 kda regulatory subunit b, beta isoform (pp2a, subunit b, b-beta isoform) (pp2a, subunit b, b55- beta isoform) (pp2a, subunit b, pr55-beta isoform) (pp2a, subunit b, r2-beta isoform). [source:swissprot;acc:q00005]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4556.83\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 2945.38\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.54711\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 74\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent serine/threonine protein phosphatase 2a, 55 kda regulatory subunit b, gamma isoform (pp2a, subunit b, b-gamma isoform) (pp2a, subunit b, b55-gamma isoform) (pp2a, subunit b, pr55-gamma isoform) (pp2a, subunit b, r2-gamma isoform) (imypno1). [source:swissprot;acc:q9y2t4]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4556.99\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 2945.8\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.54694\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 75\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent nadh-ubiquinone oxidoreductase 18 kda subunit, mitochondrial precursor (ec 1.6.5.3) (ec 1.6.99.3) (complex i-18 kda) (ci-18 kda) (complex i- aqdq) (ci-aqdq). [source:swissprot;acc:o43181]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 1920.75\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 2907.43\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.5137\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 76\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent serine/threonine protein phosphatase 2a, 65 kda regulatory subunit a, beta isoform (pp2a, subunit a, pr65-beta isoform) (pp2a, subunit a, r1-beta isoform). [source:swissprot;acc:p30154]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4599.26\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 3058.57\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.50373\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 77\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent serine/threonine protein phosphatase 2a, 65 kda regulatory subunit a, alpha isoform (pp2a, subunit a, pr65-alpha isoform) (pp2a, subunit a, r1-alpha isoform) (medium tumor antigen-associated 61 kda protein). [source:swissprot;acc:p30153]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4612.39\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 3093.6\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.49095\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 78\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent cyclic-amp-dependent transcription factor atf-3 (activating transcription factor 3). [source:swissprot;acc:p18847]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4800.81\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7132.71\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.48573\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 79\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent protein cgi-126 (protein hspc155). [source:swissprot;acc:q9y3c8]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3074.57\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4567.51\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.48558\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 80\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent nucleolysin tia-1 (rna-binding protein tia-1) (p40-tia-1) [contains: p15-tia-1]. [source:swissprot;acc:p31483]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4133.47\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5945.32\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.43834\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 81\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent nucleolysin tiar (tia-1 related protein). [source:swissprot;acc:q01085]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4136.36\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5943.56\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.43691\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 82\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent small nuclear ribonucleoprotein sm d1 (snrnp core protein d1) (sm-d1) (sm-d autoantigen). [source:swissprot;acc:p13641]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4172.91\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5954.48\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.42694\vspace{3pt}}\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/