Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 2808 to 2857 of 6456 in total
Value Type: Ranked
Interaction Map: High confidence
Filtered: 1
\def\wcA{0.14285714285714\textwidth} \def\wcB{0.14285714285714\textwidth} \def\wcC{0.14285714285714\textwidth} \def\wcD{0.14285714285714\textwidth} \def\wcE{0.14285714285714\textwidth} \def\wcF{0.14285714285714\textwidth} \begin{longtable}{|c|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Network Comparison Type\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent 1404\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent splicing factor 3b subunit 4 (spliceosome associated protein 49) (sap 49) (sf3b50) (pre-mrna splicing factor sf3b 49 kda subunit). [source:swissprot;acc:q15427]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 232.752\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 237.65\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02104\vspace{3pt}}\\\cline{1-2}\cline{4-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1405\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent eukaryotic translation initiation factor 3 subunit 8 (eif3 p110) (eif3c). [source:swissprot;acc:q99613]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 245.532\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 240.483\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.021\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent similar to ecotropic viral integration site 5; neuroblastoma stage 4s gene. [source:refseq;acc:nm\_145245]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 218.829\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 214.493\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 4.336\vspace{3pt}}}\\\cline{1-2} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1406\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent ecotropic viral integration site 5; neuroblastoma stage 4s gene. [source:refseq;acc:nm\_005665]\vspace{3pt}}&&&&\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent orphan nuclear receptor nr6a1 (germ cell nuclear factor) (gcnf) (retinoid receptor-related testis specific receptor) (rtr). [source:swissprot;acc:q15406]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 212.833\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 208.456\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.021\vspace{3pt}}\\\cline{1-2}\cline{4-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1407\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent wd repeat and fyve domain containing 1 isoform 1; phosphoinositide-binding protein sr1; wd40 and fyve domain containing 1. [source:refseq;acc:nm\_020830]\vspace{3pt}}}&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 206.104\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 210.424\vspace{3pt}}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02096\vspace{3pt}}\\\cline{3-3}\cline{6-6} &&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&&&\parbox{\wcF}{\vspace{3pt}\noindent 4.32\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1408\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent stromal interaction molecule 1 precursor. [source:swissprot;acc:q13586]\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 206.102\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 210.42\vspace{3pt}}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02095\vspace{3pt}}\\\cline{3-3}\cline{6-6} &&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&&&\parbox{\wcF}{\vspace{3pt}\noindent 4.318\vspace{3pt}}\\\cline{1-3}\cline{6-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1409\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent trap/mediator complex component trap25. [source:refseq;acc:nm\_080651]\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&&&\parbox{\wcF}{\vspace{3pt}\noindent 1.02095\vspace{3pt}}\\\cline{3-3}\cline{6-6} &&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&&&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 4.318\vspace{3pt}}}\\\cline{1-2} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1410\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent serine/threonine-protein kinase pak 4 (ec 2.7.1.-) (p21-activated kinase 4) (pak-4). [source:swissprot;acc:o96013]\vspace{3pt}}&&&&\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent wd repeat- and fyve domain-containing protein 2; wd40 and fyve domain containing 2. [source:refseq;acc:nm\_052950]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 206.1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 210.417\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02095\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1411\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent polyposis locus protein 1 (tb2 protein). [source:swissprot;acc:q00765]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\multirow{11}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 206.102\vspace{3pt}}}&\multirow{11}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 210.42\vspace{3pt}}}&\parbox{\wcF}{\vspace{3pt}\noindent 4.318\vspace{3pt}}\\\cline{2-3}\cline{6-6} &\parbox{\wcB}{\vspace{3pt}\noindent serine/threonine-protein kinase pak 4 (ec 2.7.1.-) (p21-activated kinase 4) (pak-4). [source:swissprot;acc:o96013]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&&&\parbox{\wcF}{\vspace{3pt}\noindent 1.02095\vspace{3pt}}\\\cline{1-3}\cline{6-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1412\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent acyl-coa dehydrogenase, medium-chain specific, mitochondrial precursor (ec 1.3.99.3) (mcad). [source:swissprot;acc:p11310]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&&&\parbox{\wcF}{\vspace{3pt}\noindent 4.318\vspace{3pt}}\\\cline{2-3}\cline{6-6} &\parbox{\wcB}{\vspace{3pt}\noindent polyposis locus protein 1 (tb2 protein). [source:swissprot;acc:q00765]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&&&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 1.02095\vspace{3pt}}}\\\cline{1-2} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1413\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent acyl-coa dehydrogenase, medium-chain specific, mitochondrial precursor (ec 1.3.99.3) (mcad). [source:swissprot;acc:p11310]\vspace{3pt}}&&&&\\\cline{2-3}\cline{6-6} &\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent polyposis locus protein 1-like 1; likely ortholog of mouse polyposis locus protein 1-like 1. [source:refseq;acc:nm\_138393]\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&&&\parbox{\wcF}{\vspace{3pt}\noindent 4.318\vspace{3pt}}\\\cline{1-1}\cline{3-3}\cline{6-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1414\vspace{3pt}}}&&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&&&\parbox{\wcF}{\vspace{3pt}\noindent 1.02095\vspace{3pt}}\\\cline{2-3}\cline{6-6} &\parbox{\wcB}{\vspace{3pt}\noindent stromal interaction molecule 2 precursor. [source:swissprot;acc:q9p246]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&&&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 4.318\vspace{3pt}}}\\\cline{1-2} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1415\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent serine/threonine-protein kinase pak 7 (ec 2.7.1.-) (p21-activated kinase 7) (pak-7) (pak-5). [source:swissprot;acc:q9p286]\vspace{3pt}}&&&&\\\cline{2-3}\cline{6-6} &\parbox{\wcB}{\vspace{3pt}\noindent stromal interaction molecule 2 precursor. [source:swissprot;acc:q9p246]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&&&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 1.02095\vspace{3pt}}}\\\cline{1-2} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1416\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent serine/threonine-protein kinase pak 7 (ec 2.7.1.-) (p21-activated kinase 7) (pak-7) (pak-5). [source:swissprot;acc:q9p286]\vspace{3pt}}&&&&\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent wd repeat- and fyve domain-containing protein 2; wd40 and fyve domain containing 2. [source:refseq;acc:nm\_052950]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 206.1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 210.417\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 4.317\vspace{3pt}}\\\cline{1-2}\cline{4-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1417\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent acid ceramidase precursor (ec 3.5.1.23) (acylsphingosine deacylase) (n-acylsphingosine amidohydrolase) (ac) (putative 32 kda heart protein) (php32). [source:swissprot;acc:q13510]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 207.076\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 211.391\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 4.315\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent carboxypeptidase a5. [source:refseq;acc:nm\_080385]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 203.979\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 208.229\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 1.02084\vspace{3pt}}}\\\cline{1-2} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1418\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent carboxypeptidase b precursor (ec 3.4.17.2) (pancreas-specific protein) (pasp). [source:swissprot;acc:p15086]\vspace{3pt}}&&&&\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent cone-rod homeobox protein. [source:swissprot;acc:o43186]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 244.331\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 240.061\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 4.27\vspace{3pt}}\\\cline{1-2}\cline{4-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1419\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent homeobox protein otx1. [source:swissprot;acc:p32242]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 244.367\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 240.098\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 4.269\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent neutral and basic amino acid transport protein rbat (b(0,+)-type amino acid transport protein) (nbat) (d2h). [source:swissprot;acc:q07837]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 203.979\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 208.229\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 1.02084\vspace{3pt}}}\\\cline{1-2} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1420\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent aminoacylase-1 (ec 3.5.1.14) (n-acyl-l-amino-acid amidohydrolase) (acy-1). [source:swissprot;acc:q03154]\vspace{3pt}}&&&&\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent homeobox protein otx2. [source:swissprot;acc:p32243]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 244.478\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 240.212\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 4.266\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1421\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent acid ceramidase precursor (ec 3.5.1.23) (acylsphingosine deacylase) (n-acylsphingosine amidohydrolase) (ac) (putative 32 kda heart protein) (php32). [source:swissprot;acc:q13510]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 207.076\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 211.391\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02084\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent carboxypeptidase a5. [source:refseq;acc:nm\_080385]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 203.979\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 208.229\vspace{3pt}}}&\parbox{\wcF}{\vspace{3pt}\noindent 4.25\vspace{3pt}}\\\cline{1-3}\cline{6-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1422\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent carboxypeptidase a1 precursor (ec 3.4.17.1). [source:swissprot;acc:p15085]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&&&\parbox{\wcF}{\vspace{3pt}\noindent 1.02084\vspace{3pt}}\\\cline{2-3}\cline{6-6} &\parbox{\wcB}{\vspace{3pt}\noindent carboxypeptidase b precursor (ec 3.4.17.2) (pancreas-specific protein) (pasp). [source:swissprot;acc:p15086]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&&&\parbox{\wcF}{\vspace{3pt}\noindent 4.25\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1423\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent cysteine-rich protein 1 (cysteine-rich intestinal protein) (crip) (cysteine-rich heart protein) (hcrhp). [source:swissprot;acc:p50238]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 221.152\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 216.659\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02074\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent neutral and basic amino acid transport protein rbat (b(0,+)-type amino acid transport protein) (nbat) (d2h). [source:swissprot;acc:q07837]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 203.979\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 208.229\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 4.25\vspace{3pt}}}\\\cline{1-2} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1424\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent aminoacylase-1 (ec 3.5.1.14) (n-acyl-l-amino-acid amidohydrolase) (acy-1). [source:swissprot;acc:q03154]\vspace{3pt}}&&&&\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent sodium/potassium-transporting atpase alpha-1 chain precursor (ec 3.6.3.9) (sodium pump 1) (na+/k+ atpase 1). [source:swissprot;acc:p05023]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 214.717\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 219.157\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02068\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1425\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent carboxypeptidase a1 precursor (ec 3.4.17.1). [source:swissprot;acc:p15085]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 203.979\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 208.229\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 4.25\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent cathepsin l2 precursor (ec 3.4.22.43) (cathepsin v) (cathepsin u). [source:swissprot;acc:o60911]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 214.717\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 219.157\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 1.02068\vspace{3pt}}}\\\cline{1-2} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1426\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent cathepsin l precursor (ec 3.4.22.15) (major excreted protein) (mep). [source:swissprot;acc:p07711]\vspace{3pt}}&&&&\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent protein cgi-147. [source:swissprot;acc:q9y3e5]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 221.961\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 226.186\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 4.225\vspace{3pt}}\\\cline{1-2}\cline{4-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1427\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent casein kinase i alpha s-like. [source:refseq;acc:nm\_145203]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 229.459\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 225.237\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 4.222\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent sodium/potassium-transporting atpase alpha-3 chain (ec 3.6.3.9) (sodium pump 3) (na+/k+ atpase 3) (alpha(iii)). [source:swissprot;acc:p13637]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 214.717\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 219.157\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02068\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1428\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent casein kinase i, alpha isoform (ec 2.7.1.-) (cki-alpha) (ck1). [source:swissprot;acc:p48729]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 229.459\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 225.237\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 4.222\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent sodium/potassium-transporting atpase alpha-2 chain precursor (ec 3.6.3.9) (sodium pump 2) (na+/k+ atpase 2). [source:swissprot;acc:p50993]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 214.717\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 219.157\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02068\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1429\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent glutaminyl-trna synthetase (ec 6.1.1.18) (glutamine--trna ligase) (glnrs). [source:swissprot;acc:p47897]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 221.412\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 217.199\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 4.213\vspace{3pt}}\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/