Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 1144 to 1193 of 3228 in total
Value Type: Measured
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1
\def\wcA{0.16666666666667\textwidth} \def\wcB{0.16666666666667\textwidth} \def\wcC{0.16666666666667\textwidth} \def\wcD{0.16666666666667\textwidth} \def\wcE{0.16666666666667\textwidth} \begin{longtable}{|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent 1144\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent cpg binding protein (protein containing phd finger and cxxc domain 1). [source:swissprot;acc:q9p0u4]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6281.21\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6837.61\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.08858\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1145\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 40s ribosomal protein s30. [source:swissprot;acc:q05472]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5893.97\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6416.07\vspace{3pt}}&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1146\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent activator of basal transcription 1; tata-binding protein-binding protein; basal transcriptional activator. [source:refseq;acc:nm\_013375]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 6281.21\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 6837.61\vspace{3pt}}}&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1147\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent cytokine-like nuclear factor n-pac. [source:refseq;acc:nm\_032569]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1148\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent hect type e3 ubiquitin ligase. [source:refseq;acc:nm\_015052]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1149\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent transducin-like enhancer protein 3 (esg3). [source:swissprot;acc:q04726]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6280.74\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6837.01\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.08857\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1150\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent mstp028 protein. [source:refseq;acc:nm\_031954]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5838.87\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6355.06\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.08841\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1151\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent alpha-centractin (centractin) (centrosome-associated actin homolog) (actin-rpv) (arp1). [source:swissprot;acc:p42024]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5322.74\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5793.15\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.08838\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1152\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent beta-centractin (actin-related protein 1b) (arp1b). [source:swissprot;acc:p42025]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1153\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent swi/snf related, matrix associated, actin dependent regulator of chromatin subfamily b member 1 (integrase interactor 1 protein) (hsnf5) (baf47). [source:swissprot;acc:q12824]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5840.01\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6355.56\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.08828\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1154\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent tumor necrosis factor, alpha-induced protein 1, endothelial (b12 protein). [source:swissprot;acc:q13829]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5840.65\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6355.84\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.08821\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1155\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent transducin-like enhancer protein 4. [source:swissprot;acc:q04727]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6270.67\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6823.73\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0882\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1156\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent polymerase delta-interacting protein 1; tnfaip1-like. [source:refseq;acc:nm\_178863]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5840.77\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6355.89\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.08819\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1157\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent serine hydroxymethyltransferase, cytosolic (ec 2.1.2.1) (serine methylase) (glycine hydroxymethyltransferase) (shmt). [source:swissprot;acc:p34896]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5418.33\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5895.2\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.08801\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1158\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent delta-aminolevulinic acid dehydratase (ec 4.2.1.24) (porphobilinogen synthase) (aladh). [source:swissprot;acc:p13716]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5489.18\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5972.09\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.08797\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1159\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent kccr13l. [source:refseq;acc:nm\_139179]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5538.8\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 6025.51\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.08787\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1160\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dna repair protein rad51 homolog 1 (hrad51) (hsrad51). [source:swissprot;acc:q06609]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1161\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent n-acetyltransferase 5 (ec 2.3.1.-). [source:swissprot;acc:q9y6d2]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5315.76\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5782.63\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.08783\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1162\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent nemo-like kinase; likely ortholog of mouse nemo like kinase. [source:refseq;acc:nm\_016231]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5832.13\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 6343.59\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.0877\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1163\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent elks protein. [source:refseq;acc:nm\_015064]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1164\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent sodium/iodide cotransporter (na(+)/i(-) cotransporter) (sodium-iodide symporter) (na+/i-symporter). [source:swissprot;acc:q92911]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6600.36\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7178.84\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.08764\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1165\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent kidney and liver proline oxidase 1. [source:refseq;acc:nm\_021232]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6604.44\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7183.07\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.08761\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1166\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent solute carrier family 5 (iodide transporter), member 8; apical iodide transporter. [source:refseq;acc:nm\_145913]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6606.3\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7185.01\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0876\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1167\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent sodium-dependent multivitamin transporter (na(+)-dependent multivitamin transporter). [source:swissprot;acc:q9y289]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6607.68\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7186.45\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.08759\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1168\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent mitotic checkpoint protein bub3. [source:swissprot;acc:o43684]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5470.44\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5949.49\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.08757\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1169\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent zinc finger protein 207. [source:swissprot;acc:o43670]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1170\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ubiquitin-like protein smt3a. [source:swissprot;acc:p55854]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5826.34\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6335.98\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.08747\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1171\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ubiquitin-like protein smt3b (sentrin 2) (hsmt3). [source:swissprot;acc:p55855]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5826.29\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6335.93\vspace{3pt}}&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1172\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent acrc protein; putative nuclear protein. [source:refseq;acc:nm\_052957]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5826.32\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6335.95\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1173\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent chaperone-activity of bc1 complex-like, mitochondrial precursor (chaperone-abc1-like). [source:swissprot;acc:q8ni60]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5799.35\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6305.95\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.08735\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1174\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent cda11 protein. [source:refseq;acc:nm\_032026]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5874.11\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6387.23\vspace{3pt}}&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1175\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent aarf domain containing kinase 2; putative ubiquinone biosynthesis protein aarf. [source:refseq;acc:nm\_052853]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5799.35\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 6305.95\vspace{3pt}}}&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1176\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent aarf domain containing kinase 4. [source:refseq;acc:nm\_024876]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1177\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent aarf domain containing kinase 1. [source:refseq;acc:nm\_020421]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1178\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent pepsin a precursor (ec 3.4.23.1). [source:swissprot;acc:p00790]\vspace{3pt}}&\multirow{12}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 4392.63\vspace{3pt}}}&\multirow{12}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 4776.19\vspace{3pt}}}&\multirow{12}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.08732\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1179\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent solute carrier family 20 (phosphate transporter), member 2; glvr-2; pit-2; gibbon ape leukemia virus receptor 2; murine leukemia virus, amphotropic; receptor. [source:refseq;acc:nm\_006749]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1180\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent farnesyl pyrophosphate synthetase (fpp synthetase) (fps) (farnesyl diphosphate synthetase) [includes: dimethylallyltransferase (ec 2.5.1.1); geranyltranstransferase (ec 2.5.1.10)]. [source:swissprot;acc:p14324]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1181\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent protocadherin 15 precursor. [source:swissprot;acc:q96qu1]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1182\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent solute carrier family 20 (phosphate transporter), member 1; glvr-1; pit-1; gibbon ape leukemia virus receptor 1. [source:refseq;acc:nm\_005415]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1183\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent lipocalin-interacting membrane receptor. [source:refseq;acc:nm\_018113]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1184\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent zinc finger protein gli1 (glioma-associated oncogene) (oncogene gli). [source:swissprot;acc:p08151]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1185\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent suppressor of fused. [source:refseq;acc:nm\_016169]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1186\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent zinc finger protein gli3. [source:swissprot;acc:p10071]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1187\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent limb region 1 protein; limb region 1. [source:refseq;acc:nm\_022458]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1188\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent gastricsin precursor (ec 3.4.23.3) (pepsinogen c). [source:swissprot;acc:p20142]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1189\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent zinc finger protein gli2 (tax helper protein). [source:swissprot;acc:p10070]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1190\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent mitotic spindle assembly checkpoint protein mad2a (mad2-like 1) (hsmad2). [source:swissprot;acc:q13257]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 6599.84\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 7174.29\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.08704\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1191\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent probable cation-transporting atpase 1 (ec 3.6.1.-). [source:swissprot;acc:q9nq11]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1192\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent tata box binding protein (transcription initiation factor tfiid) (tata-box factor) (tata sequence-binding protein) (tbp). [source:swissprot;acc:p20226]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1193\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent putative eukaryotic translation initiation factor 3 subunit (eif-3) (fragment). [source:swissprot;acc:o75153]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5464.9\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5940.16\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.08697\vspace{3pt}}\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/