Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Value Type Interaction Map description Network Comparison Type Rank Gene Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 151 to 200 of 3228 in total
Value Type: Measured
Interaction Map: High confidence
Network Comparison Type: Divided
Filtered: 1
\def\wcA{0.16666666666667\textwidth} \def\wcB{0.16666666666667\textwidth} \def\wcC{0.16666666666667\textwidth} \def\wcD{0.16666666666667\textwidth} \def\wcE{0.16666666666667\textwidth} \begin{longtable}{|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent 60s ribosomal protein l4 (l1). [source:swissprot;acc:p36578]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2360\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3843.06\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 3682.72\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.04354\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 60s ribosomal protein l5. [source:swissprot;acc:p46777]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2169\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3639.65\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 3459.64\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05203\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 60s ribosomal protein l7. [source:swissprot;acc:p18124]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2308\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3976.92\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 3804.85\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.04522\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 60s ribosomal protein l8. [source:swissprot;acc:p25120]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 386\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4533.74\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5279.4\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.16447\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 60s ribosomal protein l9. [source:swissprot;acc:p32969]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2225\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3750.99\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 3580.35\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.04766\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 65 kda yes-associated protein (yap65). [source:swissprot;acc:p46937]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1459\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5672.25\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6104.01\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.07612\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 69 kda islet cell autoantigen (ica69) (islet cell autoantigen 1) (islet cell autoantigen p69) (icap69). [source:swissprot;acc:q05084]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 3227\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 9 kda protein. [source:swissprot;acc:p13994]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1461\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5672.25\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6104.01\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.07612\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent a kindred of iglon. [source:refseq;acc:nm\_173808]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2712\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5603.24\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5583.64\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00351\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent a-kinase anchor protein 5 (a-kinase anchor protein 79 kda) (akap 79) (camp-dependent protein kinase regulatory subunit ii high affinity binding protein) (h21). [source:swissprot;acc:p24588]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2788\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent a-raf proto-oncogene serine/threonine-protein kinase (ec 2.7.1.-) (a-raf-1) (proto-oncogene pks). [source:swissprot;acc:p10398]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 192\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 17757.5\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 14008\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.26767\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent aarf domain containing kinase 1. [source:refseq;acc:nm\_020421]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1177\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5799.35\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 6305.95\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.08735\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent aarf domain containing kinase 2; putative ubiquinone biosynthesis protein aarf. [source:refseq;acc:nm\_052853]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1175\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent aarf domain containing kinase 4. [source:refseq;acc:nm\_024876]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1176\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent abhydrolase domain containing protein 2 (protein phps1-2). [source:swissprot;acc:p08910]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2223\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5864.49\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6145.14\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.04786\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent abl-interactor 2; abl-interacting protein 1 (sh3-containing protein); abl binding protein 3; arg protein tyrosine kinase-binding protein; abl-interactor protein 2b; similar to spectrin sh3 domain binding protein 1. [source:refseq;acc:nm\_005759]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1333\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5803.95\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6269.44\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0802\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent acetyl-coa acetyltransferase, mitochondrial precursor (ec 2.3.1.9) (acetoacetyl-coa thiolase) (t2). [source:swissprot;acc:p24752]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2304\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6946.38\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7263.48\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.04565\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent acetyl-coa carboxylase 1 (ec 6.4.1.2) (acc-alpha) [includes: biotin carboxylase (ec 6.3.4.14)]. [source:swissprot;acc:q13085]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1514\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 7232.14\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7768.35\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.07414\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent acetyl-coa carboxylase 2 (ec 6.4.1.2) (acc-beta) [includes: biotin carboxylase (ec 6.3.4.14)]. [source:swissprot;acc:o00763]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1509\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 7237.39\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7775.21\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.07431\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent acetyl-coenzyme a synthetase, cytoplasmic (ec 6.2.1.1) (acetate--coa ligase) (acyl-activating enzyme) (acetyl-coa synthetase) (acs) (acecs). [source:swissprot;acc:q9nr19]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2342\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 7007.72\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7317.15\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.04416\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent acid ceramidase precursor (ec 3.5.1.23) (acylsphingosine deacylase) (n-acylsphingosine amidohydrolase) (ac) (putative 32 kda heart protein) (php32). [source:swissprot;acc:q13510]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1893\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6830.4\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7261.98\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06319\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent acrc protein; putative nuclear protein. [source:refseq;acc:nm\_052957]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1172\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5826.32\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6335.95\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.08747\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent actin binding lim protein 2. [source:refseq;acc:nm\_032432]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1012\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5791.82\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6340.86\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0948\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent actin, cytoplasmic 2 (gamma-actin). [source:swissprot;acc:p02571]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1354\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6036.22\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6512.64\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.07893\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent actin-binding lim protein 1 isoform a; lim actin-binding protein 1; limatin; actin-binding lim protein. [source:refseq;acc:nm\_002313]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1020\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5791.82\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6340.86\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0948\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent actin-like protein 2 (actin-related protein 2). [source:swissprot;acc:o15142]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1778\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5386.37\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5744.89\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.06656\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent actin-like protein 3 (actin-related protein 3) (actin-2). [source:swissprot;acc:p32391]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1783\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent actin-related protein 2/3 complex subunit 1a (sop2-like protein). [source:swissprot;acc:q92747]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1786\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent activated p21cdc42hs kinase. [source:refseq;acc:nm\_005781]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1055\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4757.46\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5198.91\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09279\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent activator of basal transcription 1; tata-binding protein-binding protein; basal transcriptional activator. [source:refseq;acc:nm\_013375]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1146\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6281.21\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6837.61\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.08858\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent activator of camp-responsive element modulator (crem) in testis; lim protein act. [source:refseq;acc:nm\_020482]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2435\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3669.33\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 3797.78\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03501\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent activin a receptor, type ic; activin receptor-like kinase 7. [source:refseq;acc:nm\_145259]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2160\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5379.55\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5660.25\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05218\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent activin receptor type i precursor (ec 2.7.1.37) (actr-i) (serine/threonine-protein kinase receptor r1) (skr1) (activin receptor-like kinase 2) (alk-2) (tgf-b superfamily receptor type i) (tsr-i). [source:swissprot;acc:q04771]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 3050\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent acyl carrier protein, mitochondrial precursor (acp) (nadh-ubiquinone oxidoreductase 9.6 kda subunit) (ci-sdap). [source:swissprot;acc:o14561]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1917\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6858.84\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7287.27\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06246\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent acyl-coa dehydrogenase, medium-chain specific, mitochondrial precursor (ec 1.3.99.3) (mcad). [source:swissprot;acc:p11310]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2612\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6380.61\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6476.19\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01498\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent acyl-coa dehydrogenase, short/branched chain specific, mitochondrial precursor (ec 1.3.99.-) (sbcad) (2-methyl branched chain acyl-coa dehydrogenase) (2-mebcad) (2-methylbutyryl-coenzyme a dehydrogenase) (2-methylbutyryl-coa dehydrogenase). [source:swissprot;acc:p45954]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1620\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6296.52\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6743.85\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.07104\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent acyl-coa dehydrogenase, very-long-chain specific, mitochondrial precursor (ec 1.3.99.-) (vlcad). [source:swissprot;acc:p49748]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 380\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 12998.5\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 15138.2\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.16461\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent acyl-coenzyme a oxidase 1, peroxisomal (ec 1.3.3.6) (palmitoyl-coa oxidase) (aox). [source:swissprot;acc:q15067]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2035\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6920.71\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7315.59\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05706\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent acyl-coenzyme a oxidase 2, peroxisomal (ec 1.3.3.6) (branched-chain acyl-coa oxidase) (brcacox) (trihydroxycoprostanoyl-coa oxidase) (thccox) (thca-coa oxidase). [source:swissprot;acc:q99424]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2154\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6884.69\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7247.36\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05268\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent ad24 protein. [source:refseq;acc:nm\_022451]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 445\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3753.71\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4315.95\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.14978\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent adamts-9 precursor (ec 3.4.24.-) (a disintegrin and metalloproteinase with thrombospondin motifs 9) (adam-ts 9) (adam-ts9). [source:swissprot;acc:q9p2n4]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1530\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5916.05\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6350.53\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.07344\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent adapter-related protein complex 1 beta 1 subunit (beta-adaptin 1) (adaptor protein complex ap-1 beta-1 subunit) (golgi adaptor ha1/ap1 adaptin beta subunit) (clathrin assembly protein complex 1 beta large chain). [source:swissprot;acc:q10567]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2064\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5548.79\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5861.31\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05632\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent adapter-related protein complex 1 gamma 1 subunit (gamma-adaptin) (adaptor protein complex ap-1 gamma-1 subunit) (golgi adaptor ha1/ap1 adaptin gamma-1 subunit) (clathrin assembly protein complex 1 gamma-1 large chain). [source:swissprot;acc:o43747]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2059\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5552.69\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5865.84\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.0564\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent adapter-related protein complex 1 gamma 2 subunit (gamma2-adaptin) (adaptor protein complex ap-1 gamma-2 subunit) (g2ad). [source:swissprot;acc:o75843]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2062\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5552.7\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5865.85\vspace{3pt}}&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent adapter-related protein complex 1 sigma 1a subunit (sigma-adaptin 1a) (adaptor protein complex ap-1 sigma-1a subunit) (golgi adaptor ha1/ap1 adaptin sigma-1a subunit) (clathrin assembly protein complex 1 sigma- 1a small chain) (clathrin coat assembly protein ap19) (ha1 19 kda subunit) (sigma 1a subunit of ap-1 clathrin). [source:swissprot;acc:q00382]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2061\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5552.69\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5865.84\vspace{3pt}}}&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent adapter-related protein complex 1 sigma 1b subunit (sigma-adaptin 1b) (adaptor protein complex ap-1 sigma-1b subunit) (golgi adaptor ha1/ap1 adaptin sigma-1b subunit) (clathrin assembly protein complex 1 sigma- 1b small chain) (sigma 1b subunit of ap-1 clathrin) (dc22). [source:swissprot;acc:p56377]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2058\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent adapter-related protein complex 1 sigma 1c subunit (sigma-adaptin 1c) (adaptor protein complex ap-1 sigma-1c subunit) (golgi adaptor ha1/ap1 adaptin sigma-1c subunit) (clathrin assembly protein complex 1 sigma- 1c small chain) (sigma 1c subunit of ap-1 clathrin). [source:swissprot;acc:q96pc3]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2060\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent adapter-related protein complex 2 beta 1 subunit (beta-adaptin) (plasma membrane adaptor ha2/ap2 adaptin beta subunit) (clathrin assembly protein complex 2 beta large chain) (ap105b). [source:swissprot;acc:p21851]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2050\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5556.36\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5870.11\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05647\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent adapter-related protein complex 3 beta 1 subunit (beta-adaptin 3a) (ap-3 complex beta-3a subunit) (beta-3a-adaptin). [source:swissprot;acc:o00203]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2623\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 6815.24\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 6916.14\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.01481\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent adapter-related protein complex 3 beta 2 subunit (beta-adaptin 3b) (ap-3 complex beta-3b subunit) (beta-3b-adaptin) (neuron-specific vesicle coat protein beta-nap). [source:swissprot;acc:q13367]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2625\vspace{3pt}}&&&\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/