Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 2562 to 2611 of 6456 in total
Value Type: Ranked
Interaction Map: High confidence
Filtered: 1
\def\wcA{0.14285714285714\textwidth} \def\wcB{0.14285714285714\textwidth} \def\wcC{0.14285714285714\textwidth} \def\wcD{0.14285714285714\textwidth} \def\wcE{0.14285714285714\textwidth} \def\wcF{0.14285714285714\textwidth} \begin{longtable}{|c|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Network Comparison Type\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent 1281\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent heparan sulfate n-deacetylase/n-sulfotransferase (ec 2.8.2.8) (n-hsst) (hsnst) ([heparan sulfate]-glucosamine n-sulfotransferase) (n-heparan sulfate sulfotransferase) (glucosaminyl n-deacetylase/n- sulfotransferase). [source:swissprot;acc:p52848]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 228.409\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 223.475\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 4.934\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1282\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent cytochrome p450 4f8 (ec 1.14.14.1) (cypivf8). [source:swissprot;acc:p98187]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 218.368\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 213.22\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02414\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent protein cdc27hs (cell division cycle protein 27 homolog) (h-nuc). [source:swissprot;acc:p30260]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 228.409\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 223.475\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 4.934\vspace{3pt}}\\\cline{1-2}\cline{4-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1283\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial precursor (ec 2.3.1.12) (e2) (pdc-e2) (70 kda mitochondrial autoantigen of primary biliary cirrhosis) (pbc) (m2 antigen complex 70 kda subunit). [source:swissprot;acc:p10515]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 206.482\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 211.404\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 4.922\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent likely ortholog of rat cytochrome p450 4x1. [source:refseq;acc:nm\_178033]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 218.368\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 213.22\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 1.02414\vspace{3pt}}}\\\cline{1-2} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1284\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent cytochrome p450 4f12 (ec 1.14.14.1) (cypivf12). [source:swissprot;acc:q9hcs2]\vspace{3pt}}&&&&\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent glutathione s-transferase theta 2 (ec 2.5.1.18) (gst class-theta). [source:swissprot;acc:p30712]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 228.642\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 223.726\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 4.916\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1285\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent cytochrome p450 4f2 (ec 1.14.13.30) (cypivf2) (leukotriene-b4 omega- hydroxylase) (leukotriene-b4 20-monooxygenase) (cytochrome p450- ltb-omega). [source:swissprot;acc:p78329]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 218.368\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 213.22\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02414\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent tgf-beta receptor type i precursor (ec 2.7.1.37) (tgfr-1) (tgf-beta type i receptor) (serine/threonine-protein kinase receptor r4) (skr4) (activin receptor-like kinase 5) (alk-5). [source:swissprot;acc:p36897]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 223.89\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 228.805\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 4.915\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1286\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent cytochrome p450 4f11 (ec 1.14.14.1) (cypivf11). [source:swissprot;acc:q9hbi6]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 218.368\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 213.22\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02414\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent serine/threonine-protein kinase receptor r2 precursor (ec 2.7.1.37) (skr2) (activin receptor-like kinase 4) (alk-4) (actr-ib). [source:swissprot;acc:p36896]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 223.885\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 228.797\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 4.912\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1287\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent dj18d14.4 (cytochrome p450, subfamily iva, polypeptide 11). [source:sptrembl;acc:q9ntl5]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 218.368\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 213.22\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02414\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent neuronal calcium sensor 1 (ncs-1) (frequenin homolog) (frequenin-like protein) (frequenin-like ubiquitous protein). [source:swissprot;acc:p36610]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 223.887\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 228.799\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 4.912\vspace{3pt}}\\\cline{1-2}\cline{4-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1288\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent activin a receptor, type ic; activin receptor-like kinase 7. [source:refseq;acc:nm\_145259]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 223.884\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 228.795\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 4.911\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent cytochrome p450 4b1 (ec 1.14.14.1) (cypivb1) (p450-hp). [source:swissprot;acc:p13584]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 218.368\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 213.22\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 1.02414\vspace{3pt}}}\\\cline{1-2} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1289\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent flotillin-1. [source:swissprot;acc:o75955]\vspace{3pt}}&&&&\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent peroxisomal n1-acetyl-spermine/spermidine oxidase. [source:refseq;acc:nm\_152911]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 228.644\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 223.736\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 4.908\vspace{3pt}}}\\\cline{1-2} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1290\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent atpase inhibitor, mitochondrial precursor. [source:swissprot;acc:q9uii2]\vspace{3pt}}&&&&\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent sestrin 1 (p53-regulated protein pa26). [source:swissprot;acc:q9y6p5]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 218.368\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 213.22\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02414\vspace{3pt}}\\\cline{1-2}\cline{4-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1291\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent hyaluronan synthase 2 (ec 2.4.1.212) (hyaluronate synthase 2) (hyaluronic acid synthase 2) (ha synthase 2). [source:swissprot;acc:q92819]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 221.093\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 226.399\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.024\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent polyamine oxidase isoform 1; polyamine oxidase; flavin-containing spermine oxidase; putative cyclin g1 interacting protein; flavin containing amine oxidase. [source:refseq;acc:nm\_019025]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 228.644\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 223.736\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 4.908\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1292\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent caspase-7 precursor (ec 3.4.22.-) (ice-like apoptotic protease 3) (ice-lap3) (apoptotic protease mch-3) (cmh-1). [source:swissprot;acc:p55210]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 233.942\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 228.46\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.024\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent cytochrome c-type heme lyase (ec 4.4.1.17) (cchl) (holocytochrome c- type synthase). [source:swissprot;acc:p53701]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 228.644\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 223.736\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 4.908\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1293\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent apopain precursor (ec 3.4.22.-) (cysteine protease cpp32) (yama protein) (cpp-32) (caspase-3) (casp-3) (srebp cleavage activity 1) (sca-1). [source:swissprot;acc:p42574]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 233.942\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 228.46\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.024\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent tumor protein d54 (hd54) (d52-like 2). [source:swissprot;acc:o43399]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 206.852\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 211.757\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 4.905\vspace{3pt}}\\\cline{1-2}\cline{4-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1294\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent glutathione s-transferase theta 1 (ec 2.5.1.18) (gst class-theta) (glutathione transferase t1-1). [source:swissprot;acc:p30711]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 228.646\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 223.744\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 4.902\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent hyaluronan synthase 1 (ec 2.4.1.212) (hyaluronate synthase 1) (hyaluronic acid synthase 1) (ha synthase 1) (huhas1). [source:swissprot;acc:q92839]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 221.093\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 226.399\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.024\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1295\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent cytochrome oxidase biogenesis protein oxa1, mitochondrial precursor (oxa1-like protein) (oxa1hs). [source:swissprot;acc:q15070]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 220.681\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 215.78\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 4.901\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent hyaluronan synthase 3 (ec 2.4.1.212) (hyaluronate synthase 3) (hyaluronic acid synthase 3) (ha synthase 3). [source:swissprot;acc:o00219]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 221.093\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 226.399\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.024\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1296\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent 60s ribosomal protein l34, mitochondrial precursor (l34mt). [source:swissprot;acc:q9bq48]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 220.681\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 215.78\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 4.901\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent glycerol-3-phosphate transporter (g-3-p transporter) (g-3-p permease). [source:swissprot;acc:p57057]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 209.062\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 204.174\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 1.02394\vspace{3pt}}}\\\cline{1-2} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1297\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent proline oxidase, mitochondrial precursor (ec 1.5.3.-) (proline dehydrogenase). [source:swissprot;acc:o43272]\vspace{3pt}}&&&&\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent splicing factor 3b subunit 4 (spliceosome associated protein 49) (sap 49) (sf3b50) (pre-mrna splicing factor sf3b 49 kda subunit). [source:swissprot;acc:q15427]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 232.752\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 237.65\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 4.898\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1298\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial precursor (ec 2.3.1.12) (e2) (pdc-e2) (70 kda mitochondrial autoantigen of primary biliary cirrhosis) (pbc) (m2 antigen complex 70 kda subunit). [source:swissprot;acc:p10515]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 206.482\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 211.404\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02384\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent glycerol-3-phosphate transporter (g-3-p transporter) (g-3-p permease). [source:swissprot;acc:p57057]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 209.062\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 204.174\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 4.888\vspace{3pt}}}\\\cline{1-2}\cline{4-5} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1299\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent glutathione reductase, mitochondrial precursor (ec 1.8.1.7) (gr) (grase). [source:swissprot;acc:p00390]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 207.387\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 212.275\vspace{3pt}}&\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent mitochondrial processing peptidase beta subunit, mitochondrial precursor (ec 3.4.24.64) (beta-mpp) (p-52). [source:swissprot;acc:o75439]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 217.635\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 212.575\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.0238\vspace{3pt}}\\\cline{1-2}\cline{4-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1300\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent mitochondrial processing peptidase alpha subunit, mitochondrial precursor (ec 3.4.24.64) (alpha-mpp) (p-55) (ha1523). [source:swissprot;acc:q10713]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 217.634\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 212.576\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02379\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent proline oxidase, mitochondrial precursor (ec 1.5.3.-) (proline dehydrogenase). [source:swissprot;acc:o43272]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 209.062\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 204.174\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 4.888\vspace{3pt}}\\\cline{1-2}\cline{4-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1301\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent coatomer epsilon subunit (epsilon-coat protein) (epsilon-cop). [source:swissprot;acc:o14579]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 187.964\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 192.849\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 4.885\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent tumor protein d54 (hd54) (d52-like 2). [source:swissprot;acc:o43399]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 206.852\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 211.757\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02371\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1302\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent dj947l8.1.6 (novel cub and sushi (scr repeat) domain protein) (fragment). [source:sptrembl;acc:q9h4w2]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 218.509\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 213.648\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 4.861\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent ubiquinol-cytochrome c reductase complex core protein i, mitochondrial precursor (ec 1.10.2.2). [source:swissprot;acc:p31930]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 217.624\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 212.584\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02371\vspace{3pt}}\\\cline{1-2}\cline{4-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1303\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent activator of camp-responsive element modulator (crem) in testis; lim protein act. [source:refseq;acc:nm\_020482]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 269.157\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 275.531\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02368\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent zinc finger protein zic 4 (zinc finger protein of the cerebellum 4) (fragment). [source:swissprot;acc:q8n9l1]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 218.509\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 213.648\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 4.861\vspace{3pt}}}\\\cline{1-2} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1304\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent dj947l8.1.1 (novel cub and sushi (scr repeat) domain protein) (fragment). [source:sptrembl;acc:q9h4v7]\vspace{3pt}}&&&&\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent glutathione reductase, mitochondrial precursor (ec 1.8.1.7) (gr) (grase). [source:swissprot;acc:p00390]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 207.387\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 212.275\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02357\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 1305\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent calcipressin 2 (thyroid hormone-responsive protein zaki-4) (down syndrome candidate region 1-like 1) (myocyte-enriched calcineurin interacting protein 2) (mcip2). [source:swissprot;acc:q14206]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 218.509\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 213.649\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 4.86\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent serine/threonine protein phosphatase 2b catalytic subunit, alpha isoform (ec 3.1.3.16) (calmodulin-dependent calcineurin a subunit, alpha isoform) (cam-prp catalytic subunit). [source:swissprot;acc:q08209]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 218.439\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 213.436\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.02344\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1306\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent calcipressin 1 (down syndrome critical region protein 1) (myocyte- enriched calcineurin interacting protein 1) (mcip1) (adapt78). [source:swissprot;acc:p53805]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 218.508\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 213.648\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 4.86\vspace{3pt}}\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/