Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 2458 to 2507 of 3228 in total
Value Type: Measured
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1
\def\wcA{0.16666666666667\textwidth} \def\wcB{0.16666666666667\textwidth} \def\wcC{0.16666666666667\textwidth} \def\wcD{0.16666666666667\textwidth} \def\wcE{0.16666666666667\textwidth} \begin{longtable}{|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent 2458\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent presenilin-like protein 2 (ec 3.4.99.-) (sppl2a protein). [source:swissprot;acc:q8tct8]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 4751.74\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 4900.37\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.03128\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2459\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent gtp-binding nuclear protein ran (tc4) (ran gtpase) (androgen receptor- associated protein 24). [source:swissprot;acc:p17080]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2460\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent presenilin-like protein 1 (ec 3.4.99.-) (sppl2b protein). [source:swissprot;acc:q8tct7]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2461\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent phosphoribosylformylglycinamidine synthase (ec 6.3.5.3) (fgam synthase) (fgams) (formylglycinamide ribotide amidotransferase) (fgarat) (formylglycinamide ribotide synthetase). [source:swissprot;acc:o15067]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5114.15\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5272.92\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.03105\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2462\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent bifunctional purine biosynthesis protein purh [includes: phosphoribosylaminoimidazolecarboxamide formyltransferase (ec 2.1.2.3) (aicar transformylase); imp cyclohydrolase (ec 3.5.4.10) (inosinicase) (imp synthetase) (atic)]. [source:swissprot;acc:p31939]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2463\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent multifunctional protein ade2 [includes: phosphoribosylaminoimidazole- succinocarboxamide synthase (ec 6.3.2.6) (saicar synthetase); phosphoribosylaminoimidazole carboxylase (ec 4.1.1.21) (air carboxylase) (airc)]. [source:swissprot;acc:p22234]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2464\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial precursor (ec 2.3.1.12) (e2) (pdc-e2) (70 kda mitochondrial autoantigen of primary biliary cirrhosis) (pbc) (m2 antigen complex 70 kda subunit). [source:swissprot;acc:p10515]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6291.2\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6486.07\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03098\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2465\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent germ cell-less. [source:refseq;acc:nm\_022471]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 7764.92\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 8003.67\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03075\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2466\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent pre-b-cell leukemia transcription factor-1 (homeobox protein pbx1) (homeobox protein prl). [source:swissprot;acc:p40424]\vspace{3pt}}&\multirow{9}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 7765.3\vspace{3pt}}}&\multirow{9}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 8004\vspace{3pt}}}&\multirow{9}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.03074\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2467\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent pre-b-cell leukemia transcription factor-3 (homeobox protein pbx3). [source:swissprot;acc:p40426]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2468\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent hyporthetical protein mgc27169. [source:refseq;acc:nm\_176782]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2469\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent homeobox protein meis1. [source:swissprot;acc:o00470]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2470\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent homeobox protein meis2 (meis1-related protein 1). [source:swissprot;acc:o14770]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2471\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent bag-family molecular chaperone regulator-2. [source:swissprot;acc:o95816]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2472\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent pre-b-cell leukemia transcription factor-2 (homeobox protein pbx2) (g17 protein). [source:swissprot;acc:p40425]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2473\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent pre-b-cell leukemia transcription factor 4. [source:refseq;acc:nm\_025245]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2474\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent homeobox protein meis3 (meis1-related protein 2) (fragment). [source:swissprot;acc:q99687]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2475\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent zinc finger protein 444; endothelial zinc finger protein 2. [source:refseq;acc:nm\_018337]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3573.66\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 3682.14\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03036\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2476\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent zinc finger protein 274 (zinc finger protein sp2114) (zinc finger protein hfb101) (zinc finger protein zfp2) (zf2). [source:swissprot;acc:q96gc6]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3569.07\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 3676.7\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03016\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2477\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent zinc finger protein 24 (zinc finger protein 191) (zinc finger protein kox17) (retinoic acid suppression protein a) (rsg-a). [source:swissprot;acc:p17028]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3568.84\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 3676.43\vspace{3pt}}&\multirow{6}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.03015\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2478\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent zinc finger protein 232. [source:swissprot;acc:q9uny5]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3568.96\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 3676.57\vspace{3pt}}&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2479\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent zinc finger protein 99. [source:refseq;acc:nm\_032164]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3568.99\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 3676.6\vspace{3pt}}&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2480\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent zinc finger protein 305. [source:swissprot;acc:o43309]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3568.95\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 3676.56\vspace{3pt}}&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2481\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent zinc finger protein 215 (bwscr2 associated zinc-finger protein 2) (baz 2). [source:swissprot;acc:q9ul58]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3568.8\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 3676.39\vspace{3pt}}&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2482\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent zinc finger protein 213 (putative transcription factor cr53). [source:swissprot;acc:o14771]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3568.99\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 3676.61\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2483\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent zinc finger protein 18 (zinc finger protein kox11) (fragment). [source:swissprot;acc:p17022]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3568.8\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 3676.38\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03014\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2484\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent zinc finger imprinted 2. [source:swissprot;acc:q9nzv7]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3568.45\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 3675.97\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03013\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2485\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent zinc finger protein 174 (aw-1). [source:swissprot;acc:q15697]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3568.18\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 3675.65\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03012\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2486\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent maleylacetoacetate isomerase (ec 5.2.1.2) (maai) (glutathione s- transferase zeta 1) (ec 2.5.1.18) (gstz1-1). [source:swissprot;acc:o43708]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3626.38\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 3734.8\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0299\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2487\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent tfiih basal transcription factor complex helicase subunit (ec 3.6.1.-) (dna-repair protein complementing xp-d cells) (xeroderma pigmentosum group d complementing protein) (cxpd) (dna excision repair protein ercc-2). [source:swissprot;acc:p18074]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6963.12\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7170.02\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.02971\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2488\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent heterogeneous nuclear ribonucleoprotein k (hnrnp k) (dc-stretch binding protein) (csbp) (transformation upregulated nuclear protein) (tunp). [source:swissprot;acc:q07244]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5637.59\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5804.47\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.0296\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2489\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent u4/u6 small nuclear ribonucleoprotein prp4 (u4/u6 snrnp 60 kda protein) (wd splicing factor prp4) (hprp4). [source:swissprot;acc:o43172]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2490\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent glutathione reductase, mitochondrial precursor (ec 1.8.1.7) (gr) (grase). [source:swissprot;acc:p00390]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6294.37\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6472.9\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.02836\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2491\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent hepatocyte nuclear factor 4-gamma (hnf-4-gamma). [source:swissprot;acc:q14541]\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 3436.65\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 3531.96\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.02773\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2492\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent growth arrest and dna-damage-inducible protein gadd45 gamma (cytokine responsive protein cr6). [source:swissprot;acc:o95257]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2493\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent growth arrest and dna-damage-inducible protein gadd45 alpha (dna- damage inducible transcript 1) (ddit1). [source:swissprot;acc:p24522]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2494\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent hepatocyte nuclear factor 4-alpha (hnf-4-alpha) (transcription factor hnf-4) (transcription factor 14). [source:swissprot;acc:p41235]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2495\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent growth arrest and dna-damage-inducible protein gadd45 beta (negative growth-regulatory protein myd118) (myeloid differentiation primary response protein myd118). [source:swissprot;acc:o75293]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2496\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent solute carrier family 35, member b1; udp-galactose transporter related. [source:refseq;acc:nm\_005827]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5534.46\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5684.97\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0272\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2497\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dead/h (asp-glu-ala-asp/his) box polypeptide 11; dead/h box-11 (chl1-related helicase gene-1); yeast chl1 homolog. [source:refseq;acc:nm\_030655]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 7002.3\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7192.25\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.02713\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2498\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent helicase (fragment). [source:sptrembl;acc:q92771]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 7002.03\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7191.88\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.02711\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2499\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent centromere protein j; centrosomal p4.1-associated protein; lyst-interacting protein lip1; lag-3-associated protein. [source:refseq;acc:nm\_018451]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 8186.02\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7971.27\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.02694\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2500\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent rna polymerase i associated factor 53. [source:refseq;acc:nm\_022490]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3804.53\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 3705.05\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.02685\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2501\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent glutamate dehydrogenase 2, mitochondrial precursor (ec 1.4.1.3) (gdh). [source:swissprot;acc:p49448]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 6562.71\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 6738.23\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.02675\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2502\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent glutamate dehydrogenase 1, mitochondrial precursor (ec 1.4.1.3) (gdh). [source:swissprot;acc:p00367]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2503\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent succinyl-coa ligase [gdp-forming] alpha-chain, mitochondrial precursor (ec 6.2.1.4) (succinyl-coa synthetase, alpha chain) (scs-alpha). [source:swissprot;acc:p53597]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5996.06\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 6155.81\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.02664\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2504\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent succinyl-coa ligase [adp-forming] beta-chain, mitochondrial precursor (ec 6.2.1.5) (succinyl-coa synthetase, betaa chain) (scs-betaa) (atp- specific succinyl-coa synthetase beta subunit). [source:swissprot;acc:q9p2r7]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2505\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent succinate dehydrogenase [ubiquinone] iron-sulfur protein, mitochondrial precursor (ec 1.3.5.1) (ip) (iron-sulfur subunit of complex ii). [source:swissprot;acc:p21912]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6237.83\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6400.74\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.02612\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2506\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2-oxoglutarate dehydrogenase e1 component, mitochondrial precursor (ec 1.2.4.2) (alpha-ketoglutarate dehydrogenase). [source:swissprot;acc:q02218]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6200.39\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6362.25\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0261\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2507\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent mevalonate kinase (ec 2.7.1.36) (mk). [source:swissprot;acc:q03426]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4243.44\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4352.56\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.02571\vspace{3pt}}\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/