Scientific

MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


Navigation/Query Panel:
Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 2351 to 2400 of 3228 in total 
Value Type: Measured
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1

\def\wcA{0.16666666666667\textwidth}
\def\wcB{0.16666666666667\textwidth}
\def\wcC{0.16666666666667\textwidth}
\def\wcD{0.16666666666667\textwidth}
\def\wcE{0.16666666666667\textwidth}
\begin{longtable}{|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2351\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
carboxypeptidase a1 precursor (ec 3.4.17.1). [source:swissprot;acc:p15085]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
8353.97\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
8001.45\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04406\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2352\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
coatomer epsilon subunit (epsilon-coat protein) (epsilon-cop). [source:swissprot;acc:o14579]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
8493.7\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
8135.59\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04402\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2353\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
signal transducer and activator of transcription 5b. [source:swissprot;acc:p51692]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5516.82\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5758.48\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0438\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2354\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
signal transducer and activator of transcription 5a. [source:swissprot;acc:p42229]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5516.67\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5758.22\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04379\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2355\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
atrophin-1 interacting protein 1; activin receptor interacting protein 1; likely ortholog of mouse activin receptor interacting protein 1; atrophin-1 interacting protein a; membrane associated guanylate kinase 2; activin receptor interacting p. [source:refseq;acc:nm\_012301]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5262.6\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5492.58\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0437\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2356\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
signal transducer and activator of transcription 6 (il-4 stat). [source:swissprot;acc:p42226]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5515.12\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5755.63\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04361\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2357\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
signal transducer and activator of transcription 3 (acute-phase response factor). [source:swissprot;acc:p40763]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5514.85\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5755.17\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.04358\vspace{3pt}}}\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2358\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
signal transducer and activator of transcription 4. [source:swissprot;acc:q14765]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5514.83\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5755.14\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2359\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
signal transducer and activator of transcription 1-alpha/beta (transcription factor isgf-3 components p91/p84). [source:swissprot;acc:p42224]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5514.81\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5755.1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04357\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2360\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
60s ribosomal protein l4 (l1). [source:swissprot;acc:p36578]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3843.06\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3682.72\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04354\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2361\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
dna directed rna polymerase ii polypeptide j-related gene isoform 1; rpb11b1alpha protein; rpb11b1beta; dna-directed rna polymerase ii subunit 11. [source:refseq;acc:nm\_145325]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4674.38\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4877.31\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04341\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2362\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
dna directed rna polymerase ii polypeptide j-related gene isoform 3; rpb11b1alpha protein; rpb11b1beta; dna-directed rna polymerase ii subunit 11. [source:refseq;acc:nm\_032959]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4673.96\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4876.71\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04338\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2363\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
glutamate--cysteine ligase regulatory subunit (ec 6.3.2.2) (gamma- glutamylcysteine synthetase) (gamma-ecs) (gcs light chain) (glutamate--cysteine ligase modifier subunit). [source:swissprot;acc:p48507]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
6822.6\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6539.8\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.04324\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2364\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
glutamate--cysteine ligase catalytic subunit (ec 6.3.2.2) (gamma- glutamylcysteine synthetase) (gamma-ecs) (gcs heavy chain). [source:swissprot;acc:p48506]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2365\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
bai1-associated protein 1; ww domain-containing protein 3; atrophin-1 interacting protein 3. [source:refseq;acc:nm\_004742]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5254.55\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5480.56\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04301\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2366\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
geranylgeranyl transferase type i beta subunit (ec 2.5.1.-) (type i protein geranyl-geranyltransferase beta subunit) (ggtase-i-beta). [source:swissprot;acc:p53609]\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
5265.95\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
5492.28\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.04298\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2367\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
fatty acid desaturase 3; linoleoyl-coa desaturase (delta-6-desaturase)-like 3; delta-6 fatty acid desaturase. [source:refseq;acc:nm\_021727]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2368\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
mothers against decapentaplegic homolog 4 (smad 4) (mothers against dpp homolog 4) (deletion target in pancreatic carcinoma 4) (hsmad4). [source:swissprot;acc:q13485]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2369\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
fatty acid desaturase 2; linoleoyl-coa desaturase (delta-6-desaturase)-like 2; delta-6 fatty acid desaturase. [source:refseq;acc:nm\_004265]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2370\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
fatty acid desaturase 1; linoleoyl-coa desaturase (delta-6-desaturase)-like 1; delta-5 desaturase; delta-5 fatty acid desaturase. [source:refseq;acc:nm\_013402]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2371\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
dna-directed rna polymerase ii 13.3 kda polypeptide (ec 2.7.7.6) (rpb11). [source:swissprot;acc:p52435]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4668.29\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4868.52\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04289\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2372\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
60s ribosomal protein l12, mitochondrial precursor (l12mt) (5c5-2). [source:swissprot;acc:p52815]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
3677.53\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
3526.65\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.04278\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2373\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
nudix (nucleoside diphosphate linked moiety x)-type motif 12. [source:refseq;acc:nm\_031438]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2374\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
dna-directed rna polymerase iii largest subunit (ec 2.7.7.6) (rpc155) (rpc1). [source:swissprot;acc:o14802]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3669.57\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3520.86\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04224\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2375\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
trna pseudouridine synthase a (ec 4.2.1.70) (pseudouridylate synthase i) (pseudouridine synthase i) (uracil hydrolyase). [source:swissprot;acc:q9y606]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3650.02\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3502.81\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04203\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2376\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
cysteine-rich protein 1 (crp1) (crp). [source:swissprot;acc:p21291]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3976.48\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3816.38\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04195\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2377\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
likely ortholog of mouse shc sh2-domain binding protein 1. [source:refseq;acc:nm\_024745]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3977.7\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3818.01\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04183\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2378\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
smooth muscle cell lim protein (cysteine-rich protein 2) (crp2) (lim-only protein 5). [source:swissprot;acc:q16527]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3977.76\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3818.09\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04182\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2379\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
lim domain protein, cardiac (muscle lim protein) (cysteine-rich protein 3) (crp3). [source:swissprot;acc:p50461]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3979.06\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3819.84\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04168\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2380\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
suppressor of ty 5 homolog; suppressor of ty (s.cerevisiae) 5 homolog. [source:refseq;acc:nm\_003169]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3690.79\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3543.33\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04162\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2381\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
dna-directed rna polymerase i largest subunit (ec 2.7.7.6) (rna polymerase i 194 kda subunit) (rpa194). [source:swissprot;acc:o95602]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3667.94\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3521.41\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04161\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2382\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
hydroxyacid oxidase 2 (ec 1.1.3.15) (haox2) ((s)-2-hydroxy-acid oxidase, peroxisomal) (long chain alpha-hydroxy acid oxidase) (long- chain l-2-hydroxy acid oxidase). [source:swissprot;acc:q9nyq3]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4457.6\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4642.72\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04153\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2383\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
calpain 2, large [catalytic] subunit precursor (ec 3.4.22.17) (calcium-activated neutral proteinase) (canp) (m-type) (m-calpain) (millimolar-calpain) (calpain large polypeptide l2). [source:swissprot;acc:p17655]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4164.76\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4337.01\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04136\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2384\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
calpain 1, large [catalytic] subunit (ec 3.4.22.17) (calcium-activated neutral proteinase) (canp) (mu-type) (mucanp) (micromolar-calpain). [source:swissprot;acc:p07384]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4164.96\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4336.92\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04129\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2385\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
adenylate kinase isoenzyme 2, mitochondrial (ec 2.7.4.3) (atp-amp transphosphorylase). [source:swissprot;acc:p54819]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3716.43\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3569.68\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04111\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2386\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
60s ribosomal protein l30. [source:swissprot;acc:p04645]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3674.02\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3529.35\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04099\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2387\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
cell division cycle protein 23; anaphase-promoting complex subunit 8. [source:refseq;acc:nm\_004661]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
8265.85\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7940.87\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04092\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2388\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
diphosphomevalonate decarboxylase (ec 4.1.1.33) (mevalonate pyrophosphate decarboxylase) (mevalonate (diphospho)decarboxylase). [source:swissprot;acc:p53602]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4418.21\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4594.87\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03998\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2389\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
lipoate-protein ligase, mitochondrial precursor (ec 6.-.-.-) (lipoate biosynthesis protein) (lipoyl ligase) (lipoyltransferase). [source:swissprot;acc:q9y234]\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
6327.14\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6579.38\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.03987\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2390\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
tubulin gamma-1 chain (gamma-1 tubulin) (gamma-tubulin complex component 1) (gcp-1). [source:swissprot;acc:p23258]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2391\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
defender against cell death 1 (dad-1). [source:swissprot;acc:p46966]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2392\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
t-complex 11. [source:refseq;acc:nm\_018679]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2393\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
tubulin gamma-2 chain (gamma-2 tubulin). [source:swissprot;acc:q9nrh3]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2394\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
trifunctional purine biosynthetic protein adenosine-3 [includes: phosphoribosylamine--glycine ligase (ec 6.3.4.13) (gars) (glycinamide ribonucleotide synthetase) (phosphoribosylglycinamide synthetase); phosphoribosylformylglycinamidine cyclo-ligase (ec 6.3.3.1) (airs) (phosphoribosyl-aminoimidazole synthetase) (air synthase); phosphoribosylglycinamide formyltransferase (ec 2.1.2.2) (gart) (gar transformylase) (5'-phosphoribosylglycinamide transformylase)]. [source:swissprot;acc:p22102]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5502.5\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5721.43\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03979\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2395\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
homeobox protein otx2. [source:swissprot;acc:p32243]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5682\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5905.08\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03926\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2396\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
myofibrillogenesis regulator 1; trans-activated by hepatitis c virus core protein 2; likely ortholog of mouse brain protein 17. [source:refseq;acc:nm\_022572]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6711.27\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6974.49\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03922\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2397\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
yl-1 protein (transcription factor-like 1). [source:swissprot;acc:q15906]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
6707.29\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6970.07\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.03918\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2398\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
hydroxyacylglutathione hydrolase (ec 3.1.2.6) (glyoxalase ii) (glx ii). [source:swissprot;acc:q16775]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2399\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
homeobox protein otx1. [source:swissprot;acc:p32242]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5691.1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5913.92\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03915\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2400\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
malate dehydrogenase, mitochondrial precursor (ec 1.1.1.37). [source:swissprot;acc:p40926]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
4368.44\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4539.34\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.03912\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/