Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 2308 to 2357 of 3228 in total
Value Type: Ranked
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1
\def\wcA{0.16666666666667\textwidth} \def\wcB{0.16666666666667\textwidth} \def\wcC{0.16666666666667\textwidth} \def\wcD{0.16666666666667\textwidth} \def\wcE{0.16666666666667\textwidth} \begin{longtable}{|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent 2308\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent protein kinase pkx1 (ec 2.7.1.-). [source:swissprot;acc:p51817]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 215.543\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 214.459\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00505\vspace{3pt}}}\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2309\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent camp-dependent protein kinase, gamma-catalytic subunit (ec 2.7.1.37) (pka c-gamma). [source:swissprot;acc:p22612]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 215.542\vspace{3pt}}&&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2310\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ubiquitin. [source:swissprot;acc:p02248]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 216.617\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 215.529\vspace{3pt}}&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2311\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent camp-dependent protein kinase, beta-catalytic subunit (ec 2.7.1.37) (pka c-beta). [source:swissprot;acc:p22694]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 215.542\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 214.459\vspace{3pt}}}&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2312\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent camp-dependent protein kinase, alpha-catalytic subunit (ec 2.7.1.37) (pka c-alpha). [source:swissprot;acc:p17612]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2313\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent camp-dependent protein kinase type ii-beta regulatory chain. [source:swissprot;acc:p31323]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 215.529\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 214.449\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00504\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2314\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ubiquitin-conjugating enzyme e2-17 kda 2 (ec 6.3.2.19) (ubiquitin- protein ligase) (ubiquitin carrier protein) (e2(17)kb 2). [source:swissprot;acc:p51669]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 194.743\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 195.708\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00496\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2315\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent acetyl-coa carboxylase 2 (ec 6.4.1.2) (acc-beta) [includes: biotin carboxylase (ec 6.3.4.14)]. [source:swissprot;acc:o00763]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 194.825\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 195.787\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00494\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2316\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 26s proteasome non-atpase regulatory subunit 12 (26s proteasome regulatory subunit p55). [source:swissprot;acc:o00232]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 217.241\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 218.311\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00493\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2317\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent serine/threonine protein phosphatase 6 (ec 3.1.3.16) (pp6). [source:swissprot;acc:o00743]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 194.834\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 195.794\vspace{3pt}}}&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2318\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent sporulation-induced transcript 4-associated protein. [source:refseq;acc:nm\_018312]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2319\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent acetyl-coa carboxylase 1 (ec 6.4.1.2) (acc-alpha) [includes: biotin carboxylase (ec 6.3.4.14)]. [source:swissprot;acc:q13085]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 194.842\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 195.8\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00492\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2320\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent rad54-like protein; rad54 homolog. [source:refseq;acc:nm\_003579]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 219.292\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 218.218\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2321\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent tetratricopeptide repeat protein 4 (my044 protein). [source:swissprot;acc:o95801]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 203.909\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 202.925\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00485\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2322\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent trans-prenyltransferase; polyprenyl pyrophosphate synthetase. [source:refseq;acc:nm\_014317]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 236.023\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 234.905\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00476\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2323\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent asparaginyl-trna synthetase, cytoplasmic (ec 6.1.1.22) (asparagine-- trna ligase) (asnrs). [source:swissprot;acc:o43776]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 192.773\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 193.691\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2324\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent proteasome subunit beta type 1 (ec 3.4.25.1) (proteasome component c5) (macropain subunit c5) (multicatalytic endopeptidase complex subunit c5) (proteasome gamma chain). [source:swissprot;acc:p20618]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 212.129\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 211.129\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00474\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2325\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent methionyl-trna formyltransferase, mitochondrial precursor (ec 2.1.2.9) (mtfmt). [source:swissprot;acc:q96dp5]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 221.728\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 220.685\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00473\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2326\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dual specificity mitogen-activated protein kinase kinase 4 (ec 2.7.1.-) (map kinase kinase 4) (jnk activating kinase 1) (c-jun n- terminal kinase kinase 1) (jnkk) (sapk/erk kinase 1) (sek1). [source:swissprot;acc:p45985]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 220.076\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 219.05\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00468\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2327\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 26s protease regulatory subunit 6b (mip224) (mb67 interacting protein) (tat-binding protein-7) (tbp-7). [source:swissprot;acc:p43686]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 217.413\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 218.426\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00466\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2328\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent xpmc2 prevents mitotic catastrophe 2 homolog; xenopus prevents mitotic catastrophe 2 homolog. [source:refseq;acc:nm\_020385]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 209.326\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 208.357\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00465\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2329\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 26s proteasome non-atpase regulatory subunit 13 (26s proteasome regulatory subunit s11) (26s proteasome regulatory subunit p40.5). [source:swissprot;acc:q9unm6]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 217.112\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 218.116\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00462\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2330\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent phenylalanyl-trna synthetase beta chain (ec 6.1.1.20) (phenylalanine-- trna ligase beta chain) (phers) (hspc173). [source:swissprot;acc:q9nsd9]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 214.213\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 213.235\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00459\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2331\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent mbd2 (methyl-cpg-binding protein)-interacting zinc finger protein. [source:refseq;acc:nm\_015517]\vspace{3pt}}&\multirow{12}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 229.258\vspace{3pt}}}&\multirow{12}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 230.294\vspace{3pt}}}&\multirow{12}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00452\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2332\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent skeletal muscle tropomodulin (sk-tmod) (tropomodulin 4). [source:swissprot;acc:q9nzq9]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2333\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ubiquitous tropomodulin (u-tmod) (tropomodulin 3). [source:swissprot;acc:q9nyl9]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2334\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent tropomodulin 1 (erythrocyte tropomodulin) (e-tmod). [source:swissprot;acc:p28289]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2335\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent sorting nexin 9 (sh3 and px domain-containing protein 1) (sdp1 protein). [source:swissprot;acc:q9y5x1]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2336\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent neuronal tropomodulin (n-tmod) (tropomodulin 2). [source:swissprot;acc:q9nzr1]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2337\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent homeobox protein dlx-2. [source:swissprot;acc:q07687]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2338\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent homeobox protein dlx-5. [source:swissprot;acc:p56178]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2339\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent fetal brain protein 239 (239fb). [source:swissprot;acc:q15777]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2340\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent homeobox protein dlx-3. [source:swissprot;acc:o60479]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2341\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent activated p21cdc42hs kinase. [source:refseq;acc:nm\_005781]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2342\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent mitogen-activated protein kinase kinase kinase 7 interacting protein 2 isoform 1; tak1-binding protein 2. [source:refseq;acc:nm\_015093]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2343\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent glycine cleavage system h protein, mitochondrial precursor. [source:swissprot;acc:p23434]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 212.222\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 211.27\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00451\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2344\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent kccr13l. [source:refseq;acc:nm\_139179]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 219.878\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 218.893\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.0045\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2345\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dna repair protein rad51 homolog 1 (hrad51) (hsrad51). [source:swissprot;acc:q06609]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2346\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent serine/threonine-protein kinase nek1 (ec 2.7.1.37) (nima-related protein kinase 1) (ny-ren-55 antigen). [source:swissprot;acc:q96py6]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 217.057\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 218.03\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00448\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2347\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent serine/threonine-protein kinase nek3 (ec 2.7.1.37) (nima-related protein kinase 3) (hspk 36). [source:swissprot;acc:p51956]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2348\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent glyceraldehyde 3-phosphate dehydrogenase, liver (ec 1.2.1.12) (gapdh). [source:swissprot;acc:p04406]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2349\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent fibulin-1 precursor. [source:swissprot;acc:p23142]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 192.348\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 191.503\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00441\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2350\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent cytosolic nonspecific dipeptidase (glutamate carboxypeptidase-like protein 1). [source:swissprot;acc:q96kp4]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 209.811\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 210.733\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00439\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2351\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent synaptotagmin xii (sytxii). [source:swissprot;acc:q8iv01]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 214.223\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 213.289\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00438\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2352\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent copper-transporting atpase 1 (ec 3.6.3.4) (copper pump 1) (menkes disease-associated protein). [source:swissprot;acc:q04656]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 215.088\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 214.155\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00436\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2353\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent electron transfer flavoprotein beta-subunit (beta-etf). [source:swissprot;acc:p38117]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 182.232\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 183.027\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2354\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent copper-transporting atpase 2 (ec 3.6.3.4) (copper pump 2) (wilson disease-associated protein). [source:swissprot;acc:p35670]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 215.078\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 214.148\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00434\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2355\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 26s proteasome non-atpase regulatory subunit 7 (26s proteasome regulatory subunit s12) (proteasome subunit p40) (mov34 protein homolog). [source:swissprot;acc:p51665]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 217.232\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 218.162\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00428\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2356\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent importin 4. [source:refseq;acc:nm\_024658]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 220.921\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 221.863\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00426\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2357\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ubiquitin-conjugating enzyme e2 g2 (ec 6.3.2.19) (ubiquitin-protein ligase g2) (ubiquitin carrier protein g2). [source:swissprot;acc:p56554]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 198.181\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 197.346\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00423\vspace{3pt}}\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/