Scientific

MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


Navigation/Query Panel:
Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 2208 to 2257 of 3228 in total 
Value Type: Measured
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1

\def\wcA{0.16666666666667\textwidth}
\def\wcB{0.16666666666667\textwidth}
\def\wcC{0.16666666666667\textwidth}
\def\wcD{0.16666666666667\textwidth}
\def\wcE{0.16666666666667\textwidth}
\begin{longtable}{|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2208\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
visinin-like protein 3 (vilip-3) (calcium-binding protein bdr-1) (hlp2) (hippocalcin-like protein 1). [source:swissprot;acc:p37235]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5259.97\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5518.26\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0491\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2209\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
neuron specific calcium-binding protein hippocalcin (p23k) (calcium- binding protein bdr-2). [source:swissprot;acc:p32076]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5259.1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5517.22\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.04908\vspace{3pt}}}\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2210\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
neurocalcin delta. [source:swissprot;acc:p29554]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5258.96\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5517.06\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2211\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
40s ribosomal protein s20. [source:swissprot;acc:p17075]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3590.56\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3422.6\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04907\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2212\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
thioredoxin domain containing; thioredoxin-related transmembrane protein; thioredoxin domain-containing. [source:refseq;acc:nm\_030755]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6087.68\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6385.84\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04898\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2213\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
proteasome subunit beta type 1 (ec 3.4.25.1) (proteasome component c5) (macropain subunit c5) (multicatalytic endopeptidase complex subunit c5) (proteasome gamma chain). [source:swissprot;acc:p20618]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6642.32\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6967.61\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04897\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2214\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
chromosome 11 open reading frame2; chromosome  11 open reading frame2. [source:refseq;acc:nm\_013265]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
5910.12\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6199.28\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.04893\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2215\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
kinesin-like protein kif13a (kinesin-like protein rbkin). [source:swissprot;acc:q9h1h9]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2216\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
conserved oligomeric golgi complex component 2 (low density lipoprotein receptor defect c-complementing protein). [source:swissprot;acc:q14746]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2217\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
kinesin-like protein kif13b (kinesin-like protein gakin). [source:swissprot;acc:q9nqt8]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2218\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
wilms' tumor 1-associating protein (wt1-associated protein). [source:swissprot;acc:q15007]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6628.99\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6952.04\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04873\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2219\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
arf gtpase-activating protein git1 (g protein-coupled receptor kinase- interactor 1). [source:swissprot;acc:q9y2x7]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5853.67\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6136.97\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0484\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2220\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
cartilage oligomeric matrix protein precursor (comp). [source:swissprot;acc:p49747]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3936.2\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3755.33\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04816\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2221\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
thrombospondin 3 precursor. [source:swissprot;acc:p49746]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3936.33\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3755.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04815\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2222\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
sqv-7-like protein (fragment). [source:sptrembl;acc:o95454]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5309.65\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5066.82\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04793\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2223\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
abhydrolase domain containing protein 2 (protein phps1-2). [source:swissprot;acc:p08910]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
5864.49\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6145.14\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.04786\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2224\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
quaking isoform 6. [source:sptrembl;acc:q9p0x9]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2225\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
60s ribosomal protein l9. [source:swissprot;acc:p32969]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3750.99\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3580.35\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04766\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2226\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ump-cmp kinase (ec 2.7.4.14) (cytidylate kinase) (deoxycytidylate kinase) (cytidine monophosphate kinase). [source:swissprot;acc:p30085]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
3650.78\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
3484.91\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.0476\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2227\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
gtp:amp phosphotransferase mitochondrial (ec 2.7.4.10) (ak3) (adenylate kinase 3 alpha like 1). [source:swissprot;acc:q9uij7]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2228\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
adenylate kinase isoenzyme 4, mitochondrial (ec 2.7.4.3) (atp-amp transphosphorylase). [source:swissprot;acc:p27144]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3650.82\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3484.97\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.04759\vspace{3pt}}}\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2229\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
surfeit locus protein 5. [source:swissprot;acc:q15528]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
3650.8\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
3484.94\vspace{3pt}}}&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2230\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein 291. [source:swissprot;acc:q9by12]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2231\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
peroxisome biogenesis factor 1 (peroxin-1) (peroxisome biogenesis disorder protein 1). [source:swissprot;acc:o43933]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2232\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
protein 1-4 (atp binding protein associated with cell differentiation). [source:swissprot;acc:o14530]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2233\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
60s ribosomal protein l10 (qm protein) (tumor suppressor qm) (laminin receptor homolog). [source:swissprot;acc:p27635]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3614.08\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
3450.07\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.04754\vspace{3pt}}}\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
2234\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ribosomal protein l10-like protein. [source:refseq;acc:nm\_080746]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3614.07\vspace{3pt}}&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2235\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
40s ribosomal protein s3. [source:swissprot;acc:p23396]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3674.29\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3508.13\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04736\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2236\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
sodium/potassium-transporting atpase alpha-1 chain precursor (ec 3.6.3.9) (sodium pump 1) (na+/k+ atpase 1). [source:swissprot;acc:p05023]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5902.27\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6181.21\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.04726\vspace{3pt}}}\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
2237\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
cathepsin l2 precursor (ec 3.4.22.43) (cathepsin v) (cathepsin u). [source:swissprot;acc:o60911]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5902.26\vspace{3pt}}&&\\\cline{1-3}
\parbox{\wcA}{\vspace{3pt}\noindent
2238\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
cathepsin l precursor (ec 3.4.22.15) (major excreted protein) (mep). [source:swissprot;acc:p07711]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
5902.27\vspace{3pt}}}&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2239\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
sodium/potassium-transporting atpase alpha-3 chain (ec 3.6.3.9) (sodium pump 3) (na+/k+ atpase 3) (alpha(iii)). [source:swissprot;acc:p13637]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2240\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
sodium/potassium-transporting atpase alpha-2 chain precursor (ec 3.6.3.9) (sodium pump 2) (na+/k+ atpase 2). [source:swissprot;acc:p50993]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2241\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
protein arginine n-methyltransferase 3 (ec 2.1.1.-) (fragment). [source:swissprot;acc:o60678]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
3670.45\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
3504.91\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.04723\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2242\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
40s ribosomal protein s2 (s4) (llrep3 protein). [source:swissprot;acc:p15880]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2243\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
inosine-5'-monophosphate dehydrogenase 2 (ec 1.1.1.205) (imp dehydrogenase 2) (impdh-ii) (impd 2). [source:swissprot;acc:p12268]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
5776.96\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6049.61\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.0472\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2244\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
gmp synthase [glutamine-hydrolyzing] (ec 6.3.5.2) (glutamine amidotransferase) (gmp synthetase). [source:swissprot;acc:p49915]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2245\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
inosine-5'-monophosphate dehydrogenase 1 (ec 1.1.1.205) (imp dehydrogenase 1) (impdh-i) (impd 1). [source:swissprot;acc:p20839]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2246\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
dj718p11.1.2 (novel class ii aminotransferase similar to serine palmotyltransferase (isoform 2)) (fragment). [source:sptrembl;acc:q9ugb5]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6209.77\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6501.99\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04706\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2247\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
rna-binding protein with multiple splicing (rbp-ms). [source:swissprot;acc:q93062]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5819.36\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6092.93\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04701\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2248\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
signal recognition particle 54 kda protein (srp54). [source:swissprot;acc:p13624]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5833.01\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6106.48\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04688\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2249\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
alcohol dehydrogenase class iii chi chain (ec 1.1.1.1) (glutathione- dependent formaldehyde dehydrogenase) (ec 1.2.1.1) (fdh). [source:swissprot;acc:p11766]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
6834.03\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
7153.66\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.04677\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2250\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
esterase d (ec 3.1.1.1). [source:swissprot;acc:p10768]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2251\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
serine palmitoyltransferase 2 (ec 2.3.1.50) (long chain base biosynthesis protein 2) (lcb 2) (serine-palmitoyl-coa transferase 2) (spt 2). [source:swissprot;acc:o15270]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6196.65\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6486.12\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04671\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2252\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
arf gtpase-activating protein git2 (g protein-coupled receptor kinase- interactor 2). [source:swissprot;acc:q14161]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5840.54\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6113.01\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04665\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2253\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
mitochondrial ribosomal protein l17; lyst-interacting protein lip2. [source:refseq;acc:nm\_022061]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3629.21\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3467.48\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04664\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2254\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
alpha-1-acid glycoprotein 2 precursor (agp 2) (orosomucoid 2) (omd 2). [source:swissprot;acc:p19652]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7383.13\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7727.39\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04663\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2255\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
60s ribosomal protein l10a (csa-19). [source:swissprot;acc:p53025]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3624.59\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3463.37\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04655\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2256\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ubiquitin. [source:swissprot;acc:p02248]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7390.36\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7733.85\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04648\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2257\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
sr rich protein. [source:refseq;acc:nm\_032870]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6245.32\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6534.23\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04626\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/