Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 2075 to 2124 of 3228 in total
Value Type: Measured
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1
\def\wcA{0.16666666666667\textwidth} \def\wcB{0.16666666666667\textwidth} \def\wcC{0.16666666666667\textwidth} \def\wcD{0.16666666666667\textwidth} \def\wcE{0.16666666666667\textwidth} \begin{longtable}{|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent 2075\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent serine racemase (ec 5.1.1.-). [source:swissprot;acc:q9gzt4]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3614.91\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 3423.89\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.05579\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2076\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent af-6 protein. [source:swissprot;acc:p55196]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5746.65\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6067.27\vspace{3pt}}&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2077\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 60s ribosomal protein l34. [source:swissprot;acc:p49207]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 3614.91\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 3423.89\vspace{3pt}}}&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2078\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent protein transport protein sec61 alpha subunit isoform 2 (sec61 alpha- 2). [source:swissprot;acc:q9y2r3]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2079\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent protein transport protein sec61 alpha subunit isoform 1 (sec61 alpha- 1). [source:swissprot;acc:p38378]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2080\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent r3h domain protein 1. [source:swissprot;acc:q15032]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5837.34\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6162.91\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05577\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2081\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent paired box protein pax-6 (oculorhombin) (aniridia, type ii protein). [source:swissprot;acc:p26367]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6318.3\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6670.1\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05568\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2082\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ran-binding protein 2 (ranbp2) (nuclear pore complex protein nup358) (nucleoporin nup358) (358 kda nucleoporin) (p270). [source:swissprot;acc:p49792]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5800.93\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6123.38\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05559\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2083\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent ran-binding protein 2-like 1 isoform 2; sperm membrane protein bs-63; ran-binding protein 2-like 1. [source:refseq;acc:nm\_032260]\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent 5799.84\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6122.18\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.05558\vspace{3pt}}}\\\cline{1-1}\cline{3-4} \parbox{\wcA}{\vspace{3pt}\noindent 2084\vspace{3pt}}&&\parbox{\wcC}{\vspace{3pt}\noindent 5800.22\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6122.6\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2085\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent channel associated protein of synapse-110 (chapsyn-110) (discs, large homolog 2). [source:swissprot;acc:q15700]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5835.4\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6159.4\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.05552\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2086\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent presynaptic density protein 95 (psd-95) (discs, large homolog 4) (postsynaptic density-95). [source:swissprot;acc:p78352]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5835.44\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6159.45\vspace{3pt}}&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2087\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent presynaptic protein sap102 (synapse-associated protein 102) (neuroendocrine-dlg) (ne-dlg) (discs, large homolog 3). [source:swissprot;acc:q92796]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5835.45\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6159.46\vspace{3pt}}&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2088\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent presynaptic protein sap97 (synapse-associated protein 97) (discs, large homolog 1) (hdlg). [source:swissprot;acc:q12959]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5835.15\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6159.11\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2089\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent putative gtp-binding protein ptd004 (pro2455). [source:swissprot;acc:q9ntk5]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5775.22\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6094.89\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05535\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2090\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent kh-type splicing regulatory protein (fuse binding protein 2); kh-type splicing regulatory protein (fuse-binding protein 2). [source:refseq;acc:nm\_003685]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5817.07\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6138.59\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05527\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2091\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent maguk p55 subfamily member 6 (veli-associated maguk 1) (vam-1). [source:swissprot;acc:q9nzw5]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5247.76\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5537.75\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05526\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2092\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent far upstream element-binding protein; far upstream element binding protein; fuse-binding protein. [source:refseq;acc:nm\_003902]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5817.41\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6138.8\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05525\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2093\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent fuse binding protein 3 (fragment). [source:sptrembl;acc:q92946]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5817.56\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6138.9\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05524\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2094\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent nuclease sensitive element binding protein 1 (y box binding protein-1) (y-box transcription factor) (yb-1) (ccaat-binding transcription factor i subunit a) (cbf-a) (enhancer factor i subunit a) (efi-a) (dna-binding protein b) (dbpb). [source:swissprot;acc:p16991]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 6682.05\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 7051.02\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.05522\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2095\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dna-binding protein a (cold shock domain protein a) (single-strand dna binding protein nf-gmb). [source:swissprot;acc:p16989]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2096\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent germ cell specific y-box binding protein; contrin. [source:refseq;acc:nm\_015982]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2097\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent polypeptide n-acetylgalactosaminyltransferase 2; udp-galnac transferase 2. [source:refseq;acc:nm\_004481]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 6024.47\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 6356.56\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.05512\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2098\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent similar to expressed sequence ai415388 (fragment). [source:sptrembl;acc:q8n428]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2099\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent methionine aminopeptidase 1 (ec 3.4.11.18) (metap 1) (map 1) (peptidase m 1). [source:swissprot;acc:p53582]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 3544.03\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 3359.43\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.05495\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2100\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent methionine aminopeptidase 2 (ec 3.4.11.18) (metap 2) (peptidase m 2) (initiation factor 2 associated 67 kda glycoprotein) (p67) (p67eif2). [source:swissprot;acc:p50579]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2101\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent maguk p55 subfamily member 2 (mpp2 protein) (discs, large homolog 2). [source:swissprot;acc:q14168]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5241.34\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5529.25\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.05493\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2102\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent c-1-tetrahydrofolate synthase, cytoplasmic (c1-thf synthase) [includes: methylenetetrahydrofolate dehydrogenase (ec 1.5.1.5); methenyltetrahydrofolate cyclohydrolase (ec 3.5.4.9); formyltetrahydrofolate synthetase (ec 6.3.4.3)]. [source:swissprot;acc:p11586]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4860.34\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5127.3\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2103\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent asparaginyl-trna synthetase, cytoplasmic (ec 6.1.1.22) (asparagine-- trna ligase) (asnrs). [source:swissprot;acc:o43776]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6847.82\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7223.51\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05486\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2104\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent protein disulfide isomerase precursor (pdi) (ec 5.3.4.1) (prolyl 4- hydroxylase beta subunit) (cellular thyroid hormone binding protein) (p55). [source:swissprot;acc:p07237]\vspace{3pt}}&\multirow{9}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 6916.14\vspace{3pt}}}&\multirow{9}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 7295.24\vspace{3pt}}}&\multirow{9}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.05481\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2105\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 3-hydroxyanthranilate 3,4-dioxygenase (ec 1.13.11.6) (3-hao) (3-hydroxyanthranilic acid dioxygenase) (3-hydroxyanthranilate oxygenase). [source:swissprot;acc:p46952]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2106\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent zinc finger protein-like 1; zinc-finger protein in men1 region. [source:refseq;acc:nm\_006782]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2107\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent hus1 checkpoint protein; hus1 (s. pombe) checkpoint homolog; hus1+-like protein. [source:refseq;acc:nm\_004507]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2108\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent hyaluronan binding protein 4; intracellular antigen detected by monoclonal antibody ki-1; intracellular hyaluronan-binding protein; chromodomain helicase dna binding protein 3 interacting protein. [source:refseq;acc:nm\_014282]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2109\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent prolyl 4-hydroxylase alpha-1 subunit precursor (ec 1.14.11.2) (4-ph alpha-1) (procollagen-proline,2-oxoglutarate-4-dioxygenase alpha-1 subunit). [source:swissprot;acc:p13674]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2110\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent homeobox prospero-like protein prox1 (prox 1). [source:swissprot;acc:q92786]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2111\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent rad1 homolog isoform 1; exonuclease homolog rad1; cell cycle checkpoint protein rad1 a/b; rad1-like protein; cell cycle checkpoint protein hrad1; dna repair exonuclease (rec1); dna repair protein rad1; rad1-like dna damage checkpoint protein. [source:refseq;acc:nm\_002853]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2112\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent prolyl 4-hydroxylase alpha-2 subunit precursor (ec 1.14.11.2) (4-ph alpha-2) (procollagen-proline,2-oxoglutarate-4-dioxygenase alpha-2 subunit). [source:swissprot;acc:o15460]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2113\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent rna-binding protein 9 (rna binding motif protein 9) (hexaribonucleotide binding protein 2) (repressor of tamoxifen transcriptional activity). [source:swissprot;acc:o43251]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5776.79\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6092.77\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0547\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2114\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 60s ribosomal protein l3-like. [source:swissprot;acc:q92901]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3617.81\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 3430.31\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05466\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2115\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 60s ribosomal protein l23 (l17). [source:swissprot;acc:p23131]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 3672.49\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 3482.34\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.0546\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2116\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent brca2 and cdkn1a-interacting protein isoform bccipalpha; brca2 and cdkn1a-interacting protein; cdk inhibitor p21 binding protein; bccipalpha; bccipbeta; tok-1alpha; tok-1beta. [source:refseq;acc:nm\_016567]\vspace{3pt}}&&&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2117\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ataxin 2-binding protein. [source:swissprot;acc:q9nwb1]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5778.16\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6093.65\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2118\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent guanylate kinase (ec 2.7.4.8) (gmp kinase). [source:swissprot;acc:q16774]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5620.55\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5926.71\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05447\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2119\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent lamin a/c (70 kda lamin). [source:swissprot;acc:p02545]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5976.96\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6301.73\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.05434\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2120\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent c316g12.2 (novel protein similar to predicted yeast, worm and archae- bacterial proteins) (similar to und313) (s. cervisiae) (hypothetical protein). [source:sptrembl;acc:q9ujk0]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6951.29\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7329\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2121\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent centaurin beta 5 (cnt-b5). [source:swissprot;acc:q96p50]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5977.03\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 6301.76\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.05433\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2122\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent centaurin beta 2 (cnt-b2). [source:swissprot;acc:q15057]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2123\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent centaurin beta 1 (cnt-b1). [source:swissprot;acc:q15027]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2124\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent lamin b1. [source:swissprot;acc:p20700]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5977.09\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6301.79\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05432\vspace{3pt}}\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/