Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 1968 to 2017 of 3228 in total
Value Type: Ranked
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1
\def\wcA{0.16666666666667\textwidth} \def\wcB{0.16666666666667\textwidth} \def\wcC{0.16666666666667\textwidth} \def\wcD{0.16666666666667\textwidth} \def\wcE{0.16666666666667\textwidth} \begin{longtable}{|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent 1968\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent voltage-gated potassium channel beta-2 subunit (k+ channel beta-2 subunit) (kv-beta-2) (hkvbeta2). [source:swissprot;acc:q13303]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 211.633\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 213.703\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00978\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1969\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent aflatoxin b1 aldehyde reductase 1 (ec 1.-.-.-) (afb1-ar 1) (aldoketoreductase 7). [source:swissprot;acc:o43488]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1970\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent importin alpha-6 subunit (karyopherin alpha-5 subunit). [source:swissprot;acc:o15131]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 211.62\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 213.683\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00975\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1971\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent creatine kinase, m chain (ec 2.7.3.2) (m-ck). [source:swissprot;acc:p06732]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 198.258\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 196.346\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00974\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1972\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent regucalcin gene promotor region related protein; rgpr-p117. [source:refseq;acc:nm\_033127]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 219.777\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 217.659\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00973\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1973\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent wiskott-aldrich syndrome protein family member 2 (wasp-family protein member 2) (verprolin homology domain-containing protein 2). [source:swissprot;acc:q9y6w5]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 214.611\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 212.546\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00972\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1974\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent wiskott-aldrich syndrome protein family member 3 (wasp-family protein member 3) (verprolin homology domain-containing protein 3). [source:swissprot;acc:q9upy6]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1975\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent wiskott-aldrich syndrome protein family member 1 (wasp-family protein member 1) (verprolin homology domain-containing protein 1). [source:swissprot;acc:q92558]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1976\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent rest corepressor. [source:refseq;acc:nm\_015156]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1977\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent homolog of yeast maf1. [source:refseq;acc:nm\_032272]\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 209.539\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 207.529\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00969\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1978\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent tumor differentially expressed protein 2. [source:refseq;acc:nm\_178865]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1979\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent tumor differentially expressed protein 1 (transmembrane protein sbbi99). [source:swissprot;acc:q13530]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1980\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent tumor differentially expressed 1 protein like. [source:swissprot;acc:q9nrx5]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1981\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent d-3-phosphoglycerate dehydrogenase (ec 1.1.1.95) (3-pgdh). [source:swissprot;acc:o43175]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1982\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 40s ribosomal protein s28. [source:swissprot;acc:p25112]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 200.343\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 198.427\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00966\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1983\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent lim protein (similar to rat protein kinase c-binding enigma); enigma homolog. [source:refseq;acc:nm\_006457]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 219.25\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 217.175\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00955\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1984\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent e1a binding protein p400; p400 swi2/snf2-related protein; cagh32 protein; trinucleotide repeat containing 12. [source:refseq;acc:nm\_015409]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 219.26\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 217.193\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00952\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1985\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent mitochondrial ribosomal protein l24. [source:refseq;acc:nm\_024540]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1986\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 65 kda yes-associated protein (yap65). [source:swissprot;acc:p46937]\vspace{3pt}}&&&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1987\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent lin-7 homolog a; vertebrate lin7 homolog 1; tax interaction protein 33; mammalian lin-7 1. [source:refseq;acc:nm\_004664]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 225.022\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 222.9\vspace{3pt}}&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1988\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 9 kda protein. [source:swissprot;acc:p13994]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 219.26\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 217.193\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1989\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent collagen alpha 3(iv) chain precursor (goodpasture antigen). [source:swissprot;acc:q01955]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 219.261\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 217.195\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00951\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1990\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent collagen alpha 5(iv) chain precursor. [source:swissprot;acc:p29400]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 219.26\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 217.194\vspace{3pt}}}&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1991\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent transcriptional co-activator with pdz-binding motif (taz). [source:refseq;acc:nm\_015472]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1992\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent zasp protein (fragment). [source:sptrembl;acc:q9y4z3]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 219.267\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 217.207\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00948\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1993\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent huntingtin interacting protein 1 related (hip1-related) (hip 12). [source:swissprot;acc:o75146]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 189.052\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 190.835\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00943\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1994\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent goodpasture antigen-binding protein (ec 2.7.1.37) (gpbp) (collagen type iv alpha 3 binding protein) (star-related lipid transfer protein 11) (stard11) (start domain-containing protein 11). [source:swissprot;acc:q9y5p4]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 189.011\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 190.787\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0094\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1995\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent huntingtin interacting protein 1 (hip-i). [source:swissprot;acc:o00291]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 188.961\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 190.73\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00936\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1996\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent sodium/iodide cotransporter (na(+)/i(-) cotransporter) (sodium-iodide symporter) (na+/i-symporter). [source:swissprot;acc:q92911]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 204.682\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 202.784\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1997\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent kidney and liver proline oxidase 1. [source:refseq;acc:nm\_021232]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 204.651\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 202.759\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00933\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1998\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ribosomal protein l24-like; 60s ribosomal protein l30 isolog; my024 protein; homolog of yeast ribosomal like protein 24. [source:refseq;acc:nm\_016304]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 200.219\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 198.37\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00932\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1999\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent solute carrier family 5 (iodide transporter), member 8; apical iodide transporter. [source:refseq;acc:nm\_145913]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 204.636\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 202.748\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00931\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2000\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent sodium-dependent multivitamin transporter (na(+)-dependent multivitamin transporter). [source:swissprot;acc:q9y289]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 204.626\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 202.739\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2001\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent lin-7 homolog b; lin-7b protein; likely ortholog of mouse lin-7b; mammalian lin-7 protein 2; likely orholog of mouse lin 7 homolog b (c. elegans). [source:refseq;acc:nm\_022165]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 225.02\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 222.948\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00929\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2002\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent u2 small nuclear ribonucleoprotein b". [source:swissprot;acc:p08579]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 214.775\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 216.769\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00928\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2003\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent axonemal dynein light intermediate polypeptide 1 (inner dynein arm light chain, axonemal) (hp28). [source:swissprot;acc:o14645]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 208.315\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 206.41\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00923\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2004\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent receptor protein-tyrosine kinase erbb-4 precursor (ec 2.7.1.112) (p180erbb4) (tyrosine kinase-type cell surface receptor her4). [source:swissprot;acc:q15303]\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 225.019\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 222.969\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00919\vspace{3pt}}}\\\cline{1-2}\cline{4-4} \parbox{\wcA}{\vspace{3pt}\noindent 2005\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent epidermal growth factor receptor precursor (ec 2.7.1.112) (receptor protein-tyrosine kinase erbb-1). [source:swissprot;acc:p00533]\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 222.971\vspace{3pt}}}&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2006\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent receptor protein-tyrosine kinase erbb-2 precursor (ec 2.7.1.112) (p185erbb2) (neu proto-oncogene) (c-erbb-2) (tyrosine kinase-type cell surface receptor her2) (mln 19). [source:swissprot;acc:p04626]\vspace{3pt}}&&&\\\cline{1-2}\cline{4-4} \parbox{\wcA}{\vspace{3pt}\noindent 2007\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2-hydroxyphytanoyl-coa lyase (ec 4.1.-.-) (2-hpcl) (hspc279). [source:swissprot;acc:q9uj83]\vspace{3pt}}&&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 222.969\vspace{3pt}}}&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2008\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent receptor protein-tyrosine kinase erbb-3 precursor (ec 2.7.1.112) (c-erbb3) (tyrosine kinase-type cell surface receptor her3). [source:swissprot;acc:p21860]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2009\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent proteasome subunit beta type 10 precursor (ec 3.4.25.1) (proteasome mecl-1) (macropain subunit mecl-1) (multicatalytic endopeptidase complex subunit mecl-1). [source:swissprot;acc:p40306]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 216.201\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 214.245\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00913\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2010\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent tubulin-specific chaperone c (tubulin-folding cofactor c) (cfc). [source:swissprot;acc:q15814]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 193.517\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 191.766\vspace{3pt}}}&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2011\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent putative acyl-coa thioester hydrolase cgi-16 (ec 3.1.2.-). [source:swissprot;acc:q9y305]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 2012\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dead-box protein. [source:refseq;acc:nm\_018665]\vspace{3pt}}&&&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2013\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent protein phosphatase 1, regulatory (inhibitor) subunit 12b isoform a; myosin phosphatase regulatory subunit; myosin phosphatase, target subunit 2. [source:refseq;acc:nm\_002481]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 217.662\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 215.693\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2014\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent protein phosphatase 1, regulatory (inhibitor) subunit 12a; myosin phosphatase, target subunit 1. [source:refseq;acc:nm\_002480]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 217.676\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 215.709\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00912\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2015\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dna topoisomerase iii alpha (ec 5.99.1.2). [source:swissprot;acc:q13472]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 217.941\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 215.979\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.00908\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 2016\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial precursor (ec 1.5.5.1) (etf-qo) (etf-ubiquinone oxidoreductase) (etf dehydrogenase) (electron-transferring- flavoprotein dehydrogenase). [source:swissprot;acc:q16134]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 199.092\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 197.301\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2017\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ribosome biogenesis regulatory protein homolog. [source:swissprot;acc:q15050]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 127.397\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 128.553\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00907\vspace{3pt}}\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/