Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 1777 to 1826 of 3228 in total
Value Type: Measured
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1
\def\wcA{0.16666666666667\textwidth} \def\wcB{0.16666666666667\textwidth} \def\wcC{0.16666666666667\textwidth} \def\wcD{0.16666666666667\textwidth} \def\wcE{0.16666666666667\textwidth} \begin{longtable}{|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent 1777\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent zinc finger protein 262; cell death inhibiting rna. [source:refseq;acc:nm\_005095]\vspace{3pt}}&\multirow{10}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5386.37\vspace{3pt}}}&\multirow{10}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5744.89\vspace{3pt}}}&\multirow{10}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.06656\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1778\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent actin-like protein 2 (actin-related protein 2). [source:swissprot;acc:o15142]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1779\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent conserved oligomeric golgi complex component 3 (vesicle docking protein sec34 homolog) (p94). [source:swissprot;acc:q96jb2]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1780\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent similar to actin-related protein 3-beta. [source:sptrembl;acc:q96bt2]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1781\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent arp2/3 complex 41 kda subunit (p41-arc) (actin-related protein 2/3 complex subunit 1b). [source:swissprot;acc:o15143]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1782\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent zinc finger protein 198 (fused in myeloproliferative disorders protein) (rearranged in atypical myeloproliferative disorder protein). [source:swissprot;acc:q9ubw7]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1783\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent actin-like protein 3 (actin-related protein 3) (actin-2). [source:swissprot;acc:p32391]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1784\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent arp2/3 complex 21 kda subunit (p21-arc) (actin-related protein 2/3 complex subunit 3). [source:swissprot;acc:o15145]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1785\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent nardilysin precursor (ec 3.4.24.61) (n-arginine dibasic convertase) (nrd convertase) (nrd-c). [source:swissprot;acc:o43847]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1786\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent actin-related protein 2/3 complex subunit 1a (sop2-like protein). [source:swissprot;acc:q92747]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1787\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent interferon-related developmental regulator 2 (skmc15 protein). [source:swissprot;acc:q12894]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5386.48\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5744.78\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06652\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1788\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent arp2/3 complex 16 kda subunit (p16-arc) (actin-related protein 2/3 complex subunit 5). [source:swissprot;acc:o15511]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5386.49\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5744.76\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06651\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1789\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent serine/threonine protein kinase 12 (ec 2.7.1.37) (aurora- and ipl1- like midbody-associated protein 1) (aim-1) (aurora/ipl1-related kinase 2) (aurora-related kinase 2) (stk-1) (aurora-b). [source:swissprot;acc:q96gd4]\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5839.72\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 6227.33\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.06637\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1790\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent kinesin-like protein kif23 (mitotic kinesin-like protein-1) (kinesin- like protein 5). [source:swissprot;acc:q02241]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1791\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent serine/threonine protein kinase 13 (ec 2.7.1.37) (aurora/ipl1/eg2 protein 2) (aurora/ipl1-related kinase 3) (aurora-c). [source:swissprot;acc:q9uqb9]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1792\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent serine/threonine kinase 6 (ec 2.7.1.37) (serine/threonine kinase 15) (aurora/ipl1-related kinase 1) (aurora-related kinase 1) (hark1) (aurora-a) (breast-tumor-amplified kinase). [source:swissprot;acc:o14965]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1793\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent cylindromatosis (turban tumor syndrome); cylindromatosis 1, turban tumor syndrome. [source:refseq;acc:nm\_015247]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1794\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent epsin 2 isoform b; eps15 binding protein. [source:refseq;acc:nm\_014964]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5948.26\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6342.84\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06634\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1795\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dna-directed rna polymerases iii 12.5 kda polypeptide (ec 2.7.7.6) (rna polymerase iii c11 subunit) (hsc11p) (hrpc11) (my010 protein). [source:swissprot;acc:q9y2y1]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5501.3\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5866.02\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0663\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1796\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent tubulin tyrosine ligase-like protein hottl (hqp0207). [source:swissprot;acc:q9y4r7]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5387.64\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5743.5\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.06605\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1797\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent valyl-trna synthetase 2 (ec 6.1.1.9) (valine--trna ligase 2) (valrs 2) (g7a). [source:swissprot;acc:p26640]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5096.02\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5432.63\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1798\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 60s ribosomal protein l32. [source:swissprot;acc:p02433]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3618.02\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 3394.29\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06591\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1799\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent translation initiation factor eif-2b beta subunit (eif-2b gdp-gtp exchange factor) (s20i15) (s20iii15). [source:swissprot;acc:p49770]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5456.57\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5816.14\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0659\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1800\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent translation initiation factor eif-2b delta subunit (eif-2b gdp-gtp exchange factor). [source:swissprot;acc:q9ui10]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5424.3\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5781.58\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06587\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1801\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent epsin 1; eh domain-binding mitotic phosphoprotein. [source:refseq;acc:nm\_013333]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5881.33\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6268.57\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06584\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1802\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent thymidylate synthase (ec 2.1.1.45) (ts) (tsase). [source:swissprot;acc:p04818]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 4980.54\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5307.81\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.06571\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1803\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dihydrofolate reductase (ec 1.5.1.3). [source:swissprot;acc:p00374]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1804\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent stromal cell-derived factor 2 precursor (sdf-2). [source:swissprot;acc:q99470]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1805\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent stromal cell-derived factor 2-like protein 1 precursor (sdf2 like protein 1) (pwp1-interacting protein 8). [source:swissprot;acc:q9hcn8]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1806\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent pyruvate kinase, m1 isozyme (ec 2.7.1.40) (pyruvate kinase muscle isozyme) (cytosolic thyroid hormone-binding protein) (cthbp) (thbp1). [source:swissprot;acc:p14618]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4783.49\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5097.66\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06568\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1807\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent endothelial-derived gene 1. [source:refseq;acc:nm\_025205]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6399.54\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6818.17\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06542\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1808\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent lysyl-trna synthetase (ec 6.1.1.6) (lysine--trna ligase) (lysrs). [source:swissprot;acc:q15046]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4941.92\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5265.09\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06539\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1809\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent epsin 3. [source:refseq;acc:nm\_017957]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5816.12\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6196.21\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06535\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1810\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent colorectal mutant cancer protein (mcc protein). [source:swissprot;acc:p23508]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6520.83\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6946.75\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06532\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1811\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent tbp-associated factor 9l; neuronal cell death-related protein; taf9-like rna polymerase ii, tata box binding protein (tbp)-associated factor, 31 kd; neuronal cell death-related gene in neuron-7; transcription associated factor tafii31l; transcription initiation factor iid, 31kd subunit. [source:refseq;acc:nm\_015975]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 7659.42\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 8156.79\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06494\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1812\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent hrd1 protein isoform a; synoviolin1. [source:refseq;acc:nm\_032431]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5514.19\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5871.64\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06482\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1813\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dual specificity mitogen-activated protein kinase kinase 4 (ec 2.7.1.-) (map kinase kinase 4) (jnk activating kinase 1) (c-jun n- terminal kinase kinase 1) (jnkk) (sapk/erk kinase 1) (sek1). [source:swissprot;acc:p45985]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5866.19\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6245.4\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06464\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1814\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent heat shock protein hsp 90-beta (hsp 84) (hsp 90). [source:swissprot;acc:p08238]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5733.71\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6104.26\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06463\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1815\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent junctional adhesion molecule 1 precursor (jam) (platelet adhesion molecule 1) (pam-1) (platelet f11 receptor). [source:swissprot;acc:q9y624]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6104.77\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6498.84\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06455\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1816\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent potassium channel modulatory factor 1; potassium channel modulatory factor; differentially expressed in branching tubulogenesis 91; zinc finger, zz domain containing 1. [source:refseq;acc:nm\_020122]\vspace{3pt}}&\multirow{11}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5633.44\vspace{3pt}}}&\multirow{11}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5997\vspace{3pt}}}&\multirow{11}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.06454\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1817\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent solute carrier family 23, member 1 (sodium-dependent vitamin c transporter 1) (hsvct1) (na(+)/l-ascorbic acid transporter 1) (yolk sac permease-like molecule 3). [source:swissprot;acc:q9uhi7]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1818\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent heterogeneous nuclear ribonucleoprotein a3 (hnrnp a3) (d10s102). [source:swissprot;acc:p51991]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1819\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent adp-ribosylation factor 4. [source:swissprot;acc:p18085]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1820\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent fused toes homolog; likely ortholog of mouse fused toes. [source:refseq;acc:nm\_022476]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1821\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent shc transforming protein. [source:swissprot;acc:p29353]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1822\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent zinc finger protein 289, id1 regulated; likely ortholog of mouse zfp289. [source:refseq;acc:nm\_032389]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1823\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent neuronal shc. [source:refseq;acc:nm\_016848]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1824\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent adp-ribosylation factor 1. [source:swissprot;acc:p32889]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1825\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent heterogeneous nuclear ribonucleoprotein a1 (helix-destabilizing protein) (single-strand binding protein) (hnrnp core protein a1). [source:swissprot;acc:p09651]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1826\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent adp-ribosylation factor 3. [source:swissprot;acc:p16587]\vspace{3pt}}&&&\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/