Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 1677 to 1726 of 3228 in total
Value Type: Ranked
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1
\def\wcA{0.16666666666667\textwidth} \def\wcB{0.16666666666667\textwidth} \def\wcC{0.16666666666667\textwidth} \def\wcD{0.16666666666667\textwidth} \def\wcE{0.16666666666667\textwidth} \begin{longtable}{|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent 1677\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent glutathione s-transferase p (ec 2.5.1.18) (gst class-pi) (gstp1-1). [source:swissprot;acc:p09211]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 218.654\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 221.732\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01408\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1678\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent serine/threonine protein kinase 23 (ec 2.7.1.37) (muscle-specific serine kinase 1) (mssk-1). [source:swissprot;acc:q9upe1]\vspace{3pt}}&\multirow{8}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 216.899\vspace{3pt}}}&\multirow{8}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 213.889\vspace{3pt}}}&\multirow{8}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.01407\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1679\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent gtp binding protein 2. [source:refseq;acc:nm\_019096]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1680\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent cyclic-amp-dependent transcription factor atf-6 beta (activating transcription factor 6 beta) (atf6-beta) (camp responsive element binding protein-like 1) (camp response element binding protein-related protein) (creb-rp) (g13 protein). [source:swissprot;acc:q99941]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1681\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dna segment on chromosome 6(unique) 2654 expressed sequence; dna segment on chromosome x (unique) 2654 expressed sequence. [source:refseq;acc:nm\_012135]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1682\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent sfrs protein kinase 2 isoform b. [source:refseq;acc:nm\_182691]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1683\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent cyclic-amp-dependent transcription factor atf-6 alpha (activating transcription factor 6 alpha) (atf6-alpha). [source:swissprot;acc:p18850]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1684\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent sfrs protein kinase 1; sr protein kinase 1. [source:refseq;acc:nm\_003137]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1685\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent xap-5 protein (hxc-26 protein). [source:swissprot;acc:q14320]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1686\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent putative sialoglycoprotease type 2. [source:refseq;acc:nm\_022353]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 220.75\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 217.704\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01399\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1687\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent atp synthase delta chain, mitochondrial precursor (ec 3.6.3.14). [source:swissprot;acc:p30049]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 215.345\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 212.386\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01393\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1688\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent transcription factor-like protein mrg15 (morf-related gene 15 protein) (mortality factor 4-like 1) (msl3-1 protein) (hspc008/hspc061). [source:swissprot;acc:q9ubu8]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 228.523\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 231.703\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01392\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1689\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dead-box protein 4 (vasa homolog). [source:swissprot;acc:q9nqi0]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 228.277\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 225.163\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01383\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1690\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 40s ribosomal protein s24 (s19). [source:swissprot;acc:p16632]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 224.091\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 227.184\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0138\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1691\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent translation initiation factor if-2. [source:swissprot;acc:o60841]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 217.263\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 214.315\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01376\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1692\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent rna-binding protein 9 (rna binding motif protein 9) (hexaribonucleotide binding protein 2) (repressor of tamoxifen transcriptional activity). [source:swissprot;acc:o43251]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 218.515\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 215.551\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01375\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1693\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent inosine-5'-monophosphate dehydrogenase 2 (ec 1.1.1.205) (imp dehydrogenase 2) (impdh-ii) (impd 2). [source:swissprot;acc:p12268]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 218.937\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 215.971\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.01373\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1694\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent gmp synthase [glutamine-hydrolyzing] (ec 6.3.5.2) (glutamine amidotransferase) (gmp synthetase). [source:swissprot;acc:p49915]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1695\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent inosine-5'-monophosphate dehydrogenase 1 (ec 1.1.1.205) (imp dehydrogenase 1) (impdh-i) (impd 1). [source:swissprot;acc:p20839]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1696\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent polyadenylate-binding protein 3 (poly(a)-binding protein 3) (pabp 3) (testis-specific poly(a)-binding protein). [source:swissprot;acc:q9h361]\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 217.624\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 214.69\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.01367\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1697\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent hskin17 protein. [source:refseq;acc:nm\_012311]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1698\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent carnitine o-acetyltransferase (ec 2.3.1.7) (carnitine acetylase) (cat). [source:swissprot;acc:p43155]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1699\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent polyadenylate-binding protein 4 (poly(a)-binding protein 4) (pabp 4) (inducible poly(a)-binding protein) (ipabp) (activated-platelet protein-1) (app-1). [source:swissprot;acc:q13310]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1700\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent polyadenylate-binding protein 1 (poly(a)-binding protein 1) (pabp 1). [source:swissprot;acc:p11940]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1701\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent glucose-6-phosphate 1-dehydrogenase (ec 1.1.1.49) (g6pd). [source:swissprot;acc:p11413]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 216.079\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 219.024\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.01363\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1702\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dna-repair protein xrcc3 (x-ray repair cross-complementing protein 3). [source:swissprot;acc:o43542]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1703\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent atp-dependent dna helicase q5 (recq protein-like 5) (recq5). [source:swissprot;acc:o94762]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1704\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ataxin 2-binding protein. [source:swissprot;acc:q9nwb1]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 218.514\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 215.577\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01362\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1705\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent serine/threonine protein phosphatase 4 (ec 3.1.3.16) (pp4) (protein phosphatase x) (pp-x). [source:swissprot;acc:p33172]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 223.846\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 220.847\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.01358\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1706\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent immunoglobulin-binding protein 1 (cd79a-binding protein 1) (b cell signal transduction molecule alpha 4) (alpha 4 protein). [source:swissprot;acc:p78318]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1707\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent mitotic checkpoint serine/threonine-protein kinase bub1 beta (ec 2.7.1.-) (hbubr1) (mad3/bub1-related protein kinase) (mitotic checkpoint kinase mad3l). [source:swissprot;acc:o60566]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 221.283\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 218.334\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.01351\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1708\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent pyridoxine 5'-phosphate oxidase. [source:refseq;acc:nm\_018129]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1709\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent homeobox protein prh (hematopoietically expressed homeobox) (homeobox protein hex). [source:swissprot;acc:q03014]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 198.014\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 195.385\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01346\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1710\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent casein kinase i, epsilon isoform (ec 2.7.1.-) (cki-epsilon) (ckie). [source:swissprot;acc:p49674]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 227.225\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 224.21\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01345\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1711\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent biotin--protein ligase (ec 6.3.4.-) (biotin apo-protein ligase) [includes: biotin--[methylmalonyl-coa-carboxyltransferase] ligase (ec 6.3.4.9); biotin--[propionyl-coa-carboxylase [atp-hydrolyzing]] ligase (ec 6.3.4.10) (holocarboxylase synthetase) (hcs); biotin--[methylcrotonoyl-coa-carboxylase] ligase (ec 6.3.4.11); biotin--[acetyl-coa-carboxylase] ligase (ec 6.3.4.15)]. [source:swissprot;acc:p50747]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 218.436\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 215.553\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01337\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1712\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent transcription initiation factor tfiid 28 kda subunit (tafii-28) (tafii28) (tfiid subunit p30-beta). [source:swissprot;acc:q15544]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 208.598\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 211.375\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01331\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1713\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent sh3-containing grb2-like protein 3 (sh3 domain protein 2c) (een-b2). [source:swissprot;acc:q99963]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 206.823\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 204.111\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01329\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1714\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent armet protein precursor (arginine-rich protein). [source:swissprot;acc:p55145]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 206.549\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 203.844\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.01327\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1715\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent histidine decarboxylase (ec 4.1.1.22) (hdc). [source:swissprot;acc:p19113]\vspace{3pt}}&&&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1716\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent sh3-containing grb2-like protein 2 (sh3 domain protein 2a) (endophilin 1) (een-b1). [source:swissprot;acc:q99962]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 206.522\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 203.818\vspace{3pt}}&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1717\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent o-sialoglycoprotein endopeptidase. [source:refseq;acc:nm\_017807]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 221.058\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 218.164\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1718\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent sh3-containing grb2-like protein 1 (sh3 domain protein 2b) (extra eleven-nineteen leukemia fusion gene) (een) (een fusion partner of mll). [source:swissprot;acc:q99961]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 206.251\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 203.553\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01325\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1719\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent helicase (fragment). [source:sptrembl;acc:q92771]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 187.204\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 189.679\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.01322\vspace{3pt}}}\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 1720\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dead/h (asp-glu-ala-asp/his) box polypeptide 11; dead/h box-11 (chl1-related helicase gene-1); yeast chl1 homolog. [source:refseq;acc:nm\_030655]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 187.205\vspace{3pt}}&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1721\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent casein kinase i, delta isoform (ec 2.7.1.-) (cki-delta) (ckid). [source:swissprot;acc:p48730]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 227.125\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 224.164\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01321\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1722\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 40s ribosomal protein s13. [source:swissprot;acc:q02546]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 220.899\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 223.813\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01319\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1723\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent putative inorganic polyphosphate/atp-nad kinase (ec 2.7.1.23) (poly(p)/atp nad kinase). [source:swissprot;acc:o95544]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 212.36\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 215.147\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.01312\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1724\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent inositol polyphosphate multikinase. [source:refseq;acc:nm\_152230]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 217.676\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 220.53\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.01311\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1725\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent afg3-like protein 2 (ec 3.4.24.-) (paraplegin-like protein). [source:swissprot;acc:q9y4w6]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1726\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent alpha-(1,6)-fucosyltransferase (ec 2.4.1.68) (glycoprotein 6-alpha-l- fucosyltransferase) (gdp-fucose--glycoprotein fucosyltransferase) (gdp-l-fuc:n-acetyl-beta-d-glucosaminide alpha1,6-fucosyltransferase) (alpha1-6fuct) (fucosyltransferase 8). [source:swissprot;acc:q9byc5]\vspace{3pt}}&&&\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/