Scientific

MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 1575 to 1624 of 3228 in total 
Value Type: Ranked
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1

\def\wcA{0.16666666666667\textwidth}
\def\wcB{0.16666666666667\textwidth}
\def\wcC{0.16666666666667\textwidth}
\def\wcD{0.16666666666667\textwidth}
\def\wcE{0.16666666666667\textwidth}
\begin{longtable}{|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1575\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
scy1-like 1; telomerase regulation-associated protein; ht019 protein; telomerase regulation-associated protein; n-terminal kinase-like protein; teratoma-associated tyrosine kinase; n-terminal kinase-like. [source:refseq;acc:nm\_020680]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
222.585\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
218.982\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.01645\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1576\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
nuclear pore complex protein nup98 (nucleoporin nup98) (98 kda nucleoporin). [source:swissprot;acc:p52948]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1577\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ammecr1 protein. [source:refseq;acc:nm\_015365]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1578\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
mrna-associated protein mrnp 41 (rae1 protein homolog). [source:swissprot;acc:p78406]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1579\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
cda11 protein. [source:refseq;acc:nm\_032026]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
213.181\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
209.732\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01644\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1580\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
g2/mitotic-specific cyclin b2. [source:swissprot;acc:o95067]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
168.018\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
170.769\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.01637\vspace{3pt}}}\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
1581\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
cell division protein kinase 3 (ec 2.7.1.-). [source:swissprot;acc:q00526]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
168.002\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
170.753\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1582\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
g2/mitotic-specific cyclin b1. [source:swissprot;acc:p14635]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
168.098\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
170.844\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.01634\vspace{3pt}}}\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
1583\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
cell division protein kinase 2 (ec 2.7.1.-) (p33 protein kinase). [source:swissprot;acc:p24941]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
168.091\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
170.837\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1584\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
6-phosphogluconolactonase (ec 3.1.1.31) (6pgl). [source:swissprot;acc:o95336]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
216.891\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
220.432\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01633\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1585\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
cell division control protein 2 homolog (ec 2.7.1.-) (p34 protein kinase) (cyclin-dependent kinase 1) (cdk1). [source:swissprot;acc:p06493]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
168.145\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
170.888\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.01631\vspace{3pt}}}\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
1586\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
adapter-related protein complex 1 beta 1 subunit (beta-adaptin 1) (adaptor protein complex ap-1 beta-1 subunit) (golgi adaptor ha1/ap1 adaptin beta subunit) (clathrin assembly protein complex 1 beta large chain). [source:swissprot;acc:q10567]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
222.166\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
225.79\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1587\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
protein c20orf4 (protein cgi-23) (pro0225). [source:swissprot;acc:q9y312]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
220.129\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
216.598\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0163\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1588\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ring finger protein 25 (ec 6.3.2.-). [source:swissprot;acc:q96bh1]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
177.834\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
180.725\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01626\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1589\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
valyl-trna synthetase 2 (ec 6.1.1.9) (valine--trna ligase 2) (valrs 2) (g7a). [source:swissprot;acc:p26640]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
223.589\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
227.219\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01624\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1590\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
thymidylate synthase (ec 2.1.1.45) (ts) (tsase). [source:swissprot;acc:p04818]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
225.119\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
228.769\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.01621\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1591\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
dihydrofolate reductase (ec 1.5.1.3). [source:swissprot;acc:p00374]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1592\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
stromal cell-derived factor 2 precursor (sdf-2). [source:swissprot;acc:q99470]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1593\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
stromal cell-derived factor 2-like protein 1 precursor (sdf2 like protein 1) (pwp1-interacting protein 8). [source:swissprot;acc:q9hcn8]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1594\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
adapter-related protein complex 1 gamma 2 subunit (gamma2-adaptin) (adaptor protein complex ap-1 gamma-2 subunit) (g2ad). [source:swissprot;acc:o75843]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
222.133\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
225.731\vspace{3pt}}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0162\vspace{3pt}}\\\cline{1-3}\cline{5-5}
\parbox{\wcA}{\vspace{3pt}\noindent
1595\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
adapter-related protein complex 1 sigma 1b subunit (sigma-adaptin 1b) (adaptor protein complex ap-1 sigma-1b subunit) (golgi adaptor ha1/ap1 adaptin sigma-1b subunit) (clathrin assembly protein complex 1 sigma- 1b small chain) (sigma 1b subunit of ap-1 clathrin) (dc22). [source:swissprot;acc:p56377]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
222.134\vspace{3pt}}}&&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.01619\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1596\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
adapter-related protein complex 1 gamma 1 subunit (gamma-adaptin) (adaptor protein complex ap-1 gamma-1 subunit) (golgi adaptor ha1/ap1 adaptin gamma-1 subunit) (clathrin assembly protein complex 1 gamma-1 large chain). [source:swissprot;acc:o43747]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1597\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
adapter-related protein complex 1 sigma 1c subunit (sigma-adaptin 1c) (adaptor protein complex ap-1 sigma-1c subunit) (golgi adaptor ha1/ap1 adaptin sigma-1c subunit) (clathrin assembly protein complex 1 sigma- 1c small chain) (sigma 1c subunit of ap-1 clathrin). [source:swissprot;acc:q96pc3]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1598\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
adapter-related protein complex 1 sigma 1a subunit (sigma-adaptin 1a) (adaptor protein complex ap-1 sigma-1a subunit) (golgi adaptor ha1/ap1 adaptin sigma-1a subunit) (clathrin assembly protein complex 1 sigma- 1a small chain) (clathrin coat assembly protein ap19) (ha1 19 kda subunit) (sigma 1a subunit of ap-1 clathrin). [source:swissprot;acc:q00382]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1599\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
dystrobrevin binding protein 1; dysbindin. [source:refseq;acc:nm\_032122]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
217.871\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
214.404\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01617\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1600\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
adapter-related protein complex 2 beta 1 subunit (beta-adaptin) (plasma membrane adaptor ha2/ap2 adaptin beta subunit) (clathrin assembly protein complex 2 beta large chain) (ap105b). [source:swissprot;acc:p21851]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
222.103\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
225.675\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01608\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1601\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
phosphomannomutase 2 (ec 5.4.2.8) (pmm 2). [source:swissprot;acc:o15305]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
217.268\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
213.842\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01602\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1602\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
phosphomannomutase 1 (ec 5.4.2.8) (pmm 1) (pmmh-22). [source:swissprot;acc:q92871]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
217.334\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
213.914\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01599\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1603\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
heat shock factor binding protein 1. [source:swissprot;acc:o75506]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
216.62\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
213.22\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01595\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1604\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
protein kinase clk2 (ec 2.7.1.-) (cdc-like kinase 2). [source:swissprot;acc:p49760]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
214.984\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
211.614\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01593\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1605\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
hepatocyte nuclear factor 3-alpha (hnf-3a) (forkhead box protein a1). [source:swissprot;acc:p55317]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
217.322\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
213.916\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01592\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1606\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
apolipoprotein a-i binding protein; apoa-i binding protein. [source:refseq;acc:nm\_144772]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
207.916\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
204.662\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0159\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1607\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
protein kinase clk3 (ec 2.7.1.-) (cdc-like kinase 3). [source:swissprot;acc:p49761]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
214.982\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
211.622\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01588\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1608\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ubiquitin-conjugating enzyme e2 variant 1 isoform b; dna-binding protein. [source:refseq;acc:nm\_003349]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
208.106\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
204.867\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01581\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1609\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
utp--glucose-1-phosphate uridylyltransferase 2 (ec 2.7.7.9) (udp- glucose pyrophosphorylase 2) (udpgp 2) (ugpase 2). [source:swissprot;acc:q16851]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
208.113\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
204.876\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.0158\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1610\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ubiquitin-conjugating enzyme e2 variant 2; 1 alpha,25-dihydroxyvitamin d3-inducible; enterocyte differentiation promoting factor; methyl methanesulfonate sensitive 2, s. cerevisiae, homolog of. [source:refseq;acc:nm\_003350]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
208.122\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
204.886\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01579\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1611\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
p10-binding protein. [source:refseq;acc:nm\_024491]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
221.313\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
217.877\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01577\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1612\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
enthoprotin; epsin 4; clathrin interacting protein localized in the trans-golgi region. [source:refseq;acc:nm\_014666]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
221.426\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
224.902\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.0157\vspace{3pt}}}\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
1613\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
hiv-1 tat interactive protein 2, 30kda; tat-interacting protein (30kd); hiv-1 tat interactive protein 2, 30 kda; hiv-1 tat interactive protein 2, 30 kd. [source:refseq;acc:nm\_006410]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
182.378\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
185.241\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1614\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
hepatocyte nuclear factor 3-beta (hnf-3b) (forkhead box protein a2). [source:swissprot;acc:q9y261]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
217.233\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
213.897\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.0156\vspace{3pt}}}\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
1615\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
dna polymerase epsilon subunit b (ec 2.7.7.7) (dna polymerase ii subunit b). [source:swissprot;acc:p56282]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
246.38\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
242.596\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1616\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
n-acetylglutamate synthase. [source:refseq;acc:nm\_153006]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
223.179\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
226.611\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01538\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1617\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
serine hydroxymethyltransferase, cytosolic (ec 2.1.2.1) (serine methylase) (glycine hydroxymethyltransferase) (shmt). [source:swissprot;acc:p34896]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
221.045\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
217.699\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01537\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1618\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
transcription elongation factor a protein 2 (transcription elongation factor s-ii protein 2) (testis-specific s-ii) (transcription elongation factor tfiis.l). [source:swissprot;acc:q15560]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
227.768\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
231.246\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.01527\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1619\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
transcription elongation factor a protein 1 (transcription elongation factor s-ii protein 1) (transcription elongation factor tfiis.o). [source:swissprot;acc:p23193]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1620\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
transcription initiation factor iib (general transcription factor tfiib) (s300-ii). [source:swissprot;acc:q00403]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
228.611\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
225.185\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.01521\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1621\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
thyroid receptor interacting protein 3 (trip-3) (fragment). [source:swissprot;acc:q15649]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1622\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
nhp2-like protein 1 (high mobility group-like nuclear protein 2 homolog 1) ([u4/u6.u5] tri-snrnp 15.5 kda protein) (otk27). [source:swissprot;acc:p55769]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
1623\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
nuclear fragile x mental retardation protein interacting protein 1; nuclear fragile x mental retardation intercating protein 1; nuclear fragile x mental retardation protein-interacting protein 1. [source:refseq;acc:nm\_012345]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1624\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
rrp5 protein homolog (programmed cell death protein 11). [source:swissprot;acc:q14690]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
230.643\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
227.194\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.01518\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/