Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 1375 to 1424 of 6456 in total
Value Type: Measured
Interaction Map: High confidence
Filtered: 1
\def\wcA{0.14285714285714\textwidth} \def\wcB{0.14285714285714\textwidth} \def\wcC{0.14285714285714\textwidth} \def\wcD{0.14285714285714\textwidth} \def\wcE{0.14285714285714\textwidth} \def\wcF{0.14285714285714\textwidth} \begin{longtable}{|c|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Network Comparison Type\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 688\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent 5'-amp-activated protein kinase, catalytic alpha-1 chain (ec 2.7.1.-) (ampk alpha-1 chain). [source:swissprot;acc:q13131]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6920.67\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 7747.6\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.11949\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent retinoblastoma-like protein 1 (107 kda retinoblastoma-associated protein) (prb1) (p107). [source:swissprot;acc:p28749]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6311.83\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 6989.6\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 677.77\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 689\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent 5'-amp-activated protein kinase, beta-2 subunit (ampk beta-2 chain). [source:swissprot;acc:o43741]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6920.69\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 7747.63\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.11949\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent retinoblastoma-like protein 2 (130 kda retinoblastoma-associated protein) (prb2) (p130) (rbr-2). [source:swissprot;acc:q08999]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6311.6\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 6989.33\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 677.73\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 690\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent 5'-amp-activated protein kinase, gamma-3 subunit (ampk gamma-3 chain) (ampk gamma3). [source:swissprot;acc:q9ugi9]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6920.69\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 7747.63\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.11949\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent trna isopentenylpyrophosphate transferase. [source:refseq;acc:nm\_017646]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6257.99\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 6932.95\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 674.96\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 691\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent 5'-amp-activated protein kinase, beta-1 subunit (ampk beta-1 chain) (ampkb). [source:swissprot;acc:q9y478]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6920.69\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 7747.63\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.11949\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent t-complex protein 1, epsilon subunit (tcp-1-epsilon) (cct-epsilon). [source:swissprot;acc:p48643]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 8425.35\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 7751.57\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 673.78\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 692\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent 5'-amp-activated protein kinase, gamma-2 subunit (ampk gamma-2 chain) (ampk gamma2) (h91620p). [source:swissprot;acc:q9ugj0]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6920.69\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 7747.63\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.11949\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent e-1 enzyme. [source:refseq;acc:nm\_021204]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 6603.09\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 7274.72\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 671.63\vspace{3pt}}\\\cline{1-2}\cline{4-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 693\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent eukaryotic translation initiation factor 5 (eif-5). [source:swissprot;acc:p55010]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 3199.4\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 3870.8\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 671.4\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent j kappa-recombination signal binding protein (rbp-j kappa). [source:swissprot;acc:q06330]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 7725.1\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 8647.74\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 1.11943\vspace{3pt}}}\\\cline{1-2} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 694\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent human immunodeficiency virus type i enhancer binding protein 3. [source:refseq;acc:nm\_024503]\vspace{3pt}}&&&&\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent orphan nuclear receptor nr6a1 (germ cell nuclear factor) (gcnf) (retinoid receptor-related testis specific receptor) (rtr). [source:swissprot;acc:q15406]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 6075.55\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 6746.92\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 671.37\vspace{3pt}}\\\cline{1-2}\cline{4-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 695\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent vacuolar atp synthase 16 kda proteolipid subunit (ec 3.6.3.14). [source:swissprot;acc:p27449]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 5768.32\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 6434.78\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 666.46\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent zinc finger protein 40 (human immunodeficiency virus type i enhancer- binding protein 1) (hiv-ep1) (major histocompatibility complex binding protein 1) (mbp-1) (positive regulatory domain ii binding factor 1) (prdii-bf1). [source:swissprot;acc:p15822]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 7725.1\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 8647.74\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 1.11943\vspace{3pt}}}\\\cline{1-2} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 696\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent human immunodeficiency virus type i enhancer-binding protein 2 (hiv-ep2). [source:swissprot;acc:p31629]\vspace{3pt}}&&&&\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent sarcoglycan zeta; zeta-sarcoglycan. [source:refseq;acc:nm\_139167]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5768.32\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 6434.78\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 666.46\vspace{3pt}}}\\\cline{1-2} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 697\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent golgi complex associated protein 1; golgi resident protein gcp60; peripherial benzodiazepine receptor associated protein; golgi phosphoprotein 1; pbr associated protein; pka (rialpha)-associated protein. [source:refseq;acc:nm\_022735]\vspace{3pt}}&&&&\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent sh3-containing grb2-like protein 2 (sh3 domain protein 2a) (endophilin 1) (een-b1). [source:swissprot;acc:q99962]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 7105.27\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 7953.71\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.11941\vspace{3pt}}\\\cline{1-2}\cline{4-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 698\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent armet protein precursor (arginine-rich protein). [source:swissprot;acc:p55145]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 7101.95\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 7949.85\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.11939\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent delta-sarcoglycan (sg-delta) (35 kda dystrophin-associated glycoprotein) (35dag). [source:swissprot;acc:q92629]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5768.32\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 6434.78\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 666.46\vspace{3pt}}}\\\cline{1-2} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 699\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent cellular modulator of immune recognition. [source:refseq;acc:nm\_145021]\vspace{3pt}}&&&&\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent histidine decarboxylase (ec 4.1.1.22) (hdc). [source:swissprot;acc:p19113]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 7101.94\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 7949.84\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.11939\vspace{3pt}}\\\cline{1-2}\cline{4-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 700\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent 40s ribosomal protein s28. [source:swissprot;acc:p25112]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 7161.14\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 8015.92\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.11936\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent vacuolar atp synthase 21 kda proteolipid subunit (ec 3.6.3.14) (hatpl). [source:swissprot;acc:q99437]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5768.32\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 6434.78\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 666.46\vspace{3pt}}}\\\cline{1-2} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 701\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent gamma-sarcoglycan (gamma-sg) (35 kda dystrophin-associated glycoprotein) (35dag). [source:swissprot;acc:q13326]\vspace{3pt}}&&&&\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent importin-alpha re-exporter (chromosome segregation 1-like protein) (cellular apoptosis susceptibility protein). [source:swissprot;acc:p55060]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 7802.31\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 8731.82\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.11913\vspace{3pt}}\\\cline{1-2}\cline{4-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 702\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent sh3-containing grb2-like protein 3 (sh3 domain protein 2c) (een-b2). [source:swissprot;acc:q99963]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 7067.46\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 7909.27\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.11911\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent sprouty homolog 4 (spry-4). [source:swissprot;acc:q9c004]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5549.2\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 6215.42\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 666.22\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 703\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent nascent-polypeptide-associated complex alpha polypeptide. [source:refseq;acc:nm\_005594]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6912.56\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 7735.12\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.11899\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent sprouty homolog 3 (spry-3). [source:swissprot;acc:o43610]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5549.2\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 6215.42\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 666.22\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 704\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent alpha-nac protein. [source:sptrembl;acc:q9h009]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6912.27\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 7734.68\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.11898\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent sprouty homolog 1 (spry-1) (fragment). [source:swissprot;acc:o43609]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5549.2\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 6215.42\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 666.22\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 705\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent small gtp-binding tumor suppressor 1. [source:refseq;acc:nm\_145173]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6912.09\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 7734.41\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.11897\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent sprouty homolog 2 (spry-2). [source:swissprot;acc:o43597]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5549.2\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 6215.42\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 666.22\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 706\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent di-ras2. [source:refseq;acc:nm\_017594]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6912.08\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 7734.39\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.11897\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent syntaxin 12. [source:refseq;acc:nm\_177424]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent 5552.92\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 6217.59\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 664.67\vspace{3pt}}\\\cline{1-2}\cline{4-6} \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 707\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent atpase, h+ transporting, lysosomal 38kda, v0 subunit d isoform 2. [source:refseq;acc:nm\_152565]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent 5870.2\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 6533.39\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 663.19\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent c18b11 homolog (44.9kd). [source:refseq;acc:nm\_152260]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5317.78\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 5944.25\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.11781\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 708\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent protein phosphatase 2c beta isoform (ec 3.1.3.16) (pp2c-beta). [source:swissprot;acc:o75688]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4775.11\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 5438.18\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 663.07\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent z-protein (protein cgi-119) (s1r protein). [source:swissprot;acc:q9hc24]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5317.78\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 5944.25\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.11781\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 709\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent dynein intermediate chain 2, cytosolic (dh ic-2) (cytoplasmic dynein intermediate chain 2). [source:swissprot;acc:q13409]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5148.71\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 5811.74\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 663.03\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent pp1201 protein. [source:refseq;acc:nm\_022152]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5317.78\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 5944.25\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.11781\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 710\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent kv channel interacting protein 1; vesicle apc-binding protein; a-type potassium channel modulatory protein 1. [source:refseq;acc:nm\_014592]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 2755.15\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2094.3\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 660.85\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent lifeguard; kiaa0950 protein. [source:refseq;acc:nm\_012306]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5317.78\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 5944.25\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.11781\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 711\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent potassium channel-interacting protein 4 isoform 4; calsenilin-like protein. [source:refseq;acc:nm\_147183]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 2759.61\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2099.49\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 660.12\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent sterol regulatory element binding protein-2 (srebp-2) (sterol regulatory element-binding transcription factor 2). [source:swissprot;acc:q12772]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5317.78\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 5944.25\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.11781\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 712\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent kv channel interacting protein 2 isoform 4; a-type potassium channel modulatory protein 2; cardiac voltage gated potassium channel modulatory subunit. [source:refseq;acc:nm\_173193]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 2760.28\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2100.27\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 660.01\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent sterol regulatory element binding protein-1 (srebp-1) (sterol regulatory element-binding transcription factor 1). [source:swissprot;acc:p36956]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5317.78\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 5944.25\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.11781\vspace{3pt}}\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/