Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 1033 to 1082 of 3228 in total
Value Type: Ranked
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1
\def\wcA{0.16666666666667\textwidth} \def\wcB{0.16666666666667\textwidth} \def\wcC{0.16666666666667\textwidth} \def\wcD{0.16666666666667\textwidth} \def\wcE{0.16666666666667\textwidth} \begin{longtable}{|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent 1033\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent tyrosinase precursor (ec 1.14.18.1) (monophenol monooxygenase) (tumor rejection antigen ab) (sk29-ab) (lb24-ab). [source:swissprot;acc:p14679]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 221.183\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 214.406\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03161\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1034\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent steroid hormone receptor err2 (estrogen-related receptor, beta) (err-beta) (estrogen receptor-like 2) (err beta-2). [source:swissprot;acc:o95718]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 186.551\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 180.837\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0316\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1035\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent atrophin-1 interacting protein 1; activin receptor interacting protein 1; likely ortholog of mouse activin receptor interacting protein 1; atrophin-1 interacting protein a; membrane associated guanylate kinase 2; activin receptor interacting p. [source:refseq;acc:nm\_012301]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 221.682\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 228.68\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03157\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1036\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent coatomer beta subunit (beta-coat protein) (beta-cop). [source:swissprot;acc:p53618]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 171.341\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 176.746\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03155\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1037\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent thioredoxin-like; pkc-interacting cousin of thioredoxin. [source:refseq;acc:nm\_006541]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 228.412\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 235.609\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03151\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1038\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1-acyl-sn-glycerol-3-phosphate acyltransferase alpha (ec 2.3.1.51) (1- agp acyltransferase 1) (1-agpat 1) (lysophosphatidic acid acyltransferase-alpha) (lpaat-alpha) (1-acylglycerol-3-phosphate o- acyltransferase 1) (g15 protein). [source:swissprot;acc:q99943]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 186.741\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 181.041\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03148\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1039\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dihydrolipoamide dehydrogenase, mitochondrial precursor (ec 1.8.1.4) (glycine cleavage system l protein). [source:swissprot;acc:p09622]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 207.719\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 214.236\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03137\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1040\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent t-complex protein 1, epsilon subunit (tcp-1-epsilon) (cct-epsilon). [source:swissprot;acc:p48643]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 163.24\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 168.359\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03136\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1041\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent heterogeneous nuclear ribonucleoprotein l (hnrnp l). [source:swissprot;acc:p14866]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 186.774\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 181.099\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03134\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1042\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent estrogen-related receptor gamma (estrogen receptor related protein 3) (err gamma-2). [source:swissprot;acc:o75454]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 186.799\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 181.127\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03132\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1043\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma (ec 2.3.1.51) (1- agp acyltransferase 3) (1-agpat 3) (lysophosphatidic acid acyltransferase-gamma) (lpaat-gamma) (1-acylglycerol-3-phosphate o- acyltransferase 3). [source:swissprot;acc:q9nrz7]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 187.834\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 182.137\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03128\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1044\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent t-complex associated-testis-expressed 1-like (protein 91/23). [source:swissprot;acc:p51808]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 173.475\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 178.889\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.03121\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1045\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent fip1-like 1; rearranged in hypereosinophilia. [source:refseq;acc:nm\_030917]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 115.817\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 119.432\vspace{3pt}}&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1046\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent double-strand break repair protein mre11a (mre11 homolog 1). [source:swissprot;acc:p49959]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 173.475\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 178.889\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1047\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent steroid hormone receptor err1 (estrogen-related receptor, alpha) (err-alpha) (estrogen receptor-like 1). [source:swissprot;acc:p11474]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 187.022\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 181.391\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03104\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1048\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1-acyl-sn-glycerol-3-phosphate acyltransferase delta (ec 2.3.1.51) (1- agp acyltransferase 4) (1-agpat 4) (lysophosphatidic acid acyltransferase-delta) (lpaat-delta) (1-acylglycerol-3-phosphate o- acyltransferase 4). [source:swissprot;acc:q9nrz5]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 187.96\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 182.308\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.031\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1049\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent adenine phosphoribosyltransferase (ec 2.4.2.7) (aprt). [source:swissprot;acc:p07741]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 211.449\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 217.998\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.03097\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1050\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent estradiol 17 beta-dehydrogenase 1 (ec 1.1.1.62) (17-beta-hsd 1) (placental 17-beta-hydroxysteroid dehydrogenase) (20 alpha- hydroxysteroid dehydrogenase) (20-alpha-hsd) (e2dh). [source:swissprot;acc:p14061]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1051\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 17 beta-hydroxysteroid dehydrogenase. [source:sptrembl;acc:q13034]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1052\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent retinol dehydrogenase 8 (all-trans); photoreceptor outer segment all-trans retinol dehydrogenase. [source:refseq;acc:nm\_015725]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1053\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent proteasome subunit alpha type 5 (ec 3.4.25.1) (proteasome zeta chain) (macropain zeta chain) (multicatalytic endopeptidase complex zeta chain). [source:swissprot;acc:p28066]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 207.04\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 200.84\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03087\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1054\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 60s ribosomal protein l21. [source:swissprot;acc:p46778]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 223.958\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 217.263\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03082\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1055\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent hcv ns3-transactivated protein 1. [source:refseq;acc:nm\_019048]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 219.01\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 212.468\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.03079\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1056\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent vacuolar atp synthase catalytic subunit a, ubiquitous isoform (ec 3.6.3.14) (v-atpase a subunit 1) (vacuolar proton pump alpha subunit 1) (v-atpase 69 kda subunit 1) (isoform va68). [source:swissprot;acc:p38606]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1057\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent asparagine synthetase [glutamine-hydrolyzing] (ec 6.3.5.4) (glutamine- dependent asparagine synthetase) (ts11 cell cycle control protein). [source:swissprot;acc:p08243]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1058\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ataxin 2 related protein isoform a; ataxin-2 domain protein. [source:refseq;acc:nm\_007245]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 228.105\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 221.293\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.03078\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1059\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ataxin 2; olivopontocerebellar ataxia 2, autosomal dominant. [source:refseq;acc:nm\_002973]\vspace{3pt}}&&&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1060\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent nemo-like kinase; likely ortholog of mouse nemo like kinase. [source:refseq;acc:nm\_016231]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 218.162\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 211.648\vspace{3pt}}}&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1061\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent elks protein. [source:refseq;acc:nm\_015064]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1062\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent zinc finger protein 174 (aw-1). [source:swissprot;acc:q15697]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 269.963\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 278.239\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03066\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1063\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent zinc finger imprinted 2. [source:swissprot;acc:q9nzv7]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 269.96\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 278.232\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03064\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1064\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent zinc finger protein 24 (zinc finger protein 191) (zinc finger protein kox17) (retinoic acid suppression protein a) (rsg-a). [source:swissprot;acc:p17028]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 269.955\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 278.221\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.03062\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1065\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent zinc finger protein 305. [source:swissprot;acc:o43309]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 269.954\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 278.219\vspace{3pt}}&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1066\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent zinc finger protein 18 (zinc finger protein kox11) (fragment). [source:swissprot;acc:p17022]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 269.956\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 278.223\vspace{3pt}}}&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1067\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent zinc finger protein 215 (bwscr2 associated zinc-finger protein 2) (baz 2). [source:swissprot;acc:q9ul58]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1068\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent zinc finger protein 274 (zinc finger protein sp2114) (zinc finger protein hfb101) (zinc finger protein zfp2) (zf2). [source:swissprot;acc:q96gc6]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 269.953\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 278.215\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.03061\vspace{3pt}}}\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1069\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent zinc finger protein 232. [source:swissprot;acc:q9uny5]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 269.954\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 278.218\vspace{3pt}}}&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1070\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent zinc finger protein 99. [source:refseq;acc:nm\_032164]\vspace{3pt}}&&&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1071\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dna-directed rna polymerase i 16 kda polypeptide (ec 2.7.7.6) (rpa16). [source:swissprot;acc:q9y2s0]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 231.277\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 238.356\vspace{3pt}}&\\\cline{1-4} \parbox{\wcA}{\vspace{3pt}\noindent 1072\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent zinc finger protein 213 (putative transcription factor cr53). [source:swissprot;acc:o14771]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 269.954\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 278.217\vspace{3pt}}&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1073\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ww domain binding protein 2 (wbp-2). [source:swissprot;acc:q969t9]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 216.901\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 210.485\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03048\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1074\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent coatomer beta' subunit (beta'-coat protein) (beta'-cop) (p102). [source:swissprot;acc:p35606]\vspace{3pt}}&\multirow{6}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 174.387\vspace{3pt}}}&\multirow{6}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 179.697\vspace{3pt}}}&\multirow{6}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.03045\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1075\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent coatomer gamma subunit (gamma-coat protein) (gamma-cop). [source:swissprot;acc:q9y678]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1076\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent coatomer zeta-1 subunit (zeta-1 coat protein) (zeta-1 cop) (cgi-120) (hspc181). [source:swissprot;acc:q9y3c3]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1077\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent coatomer delta subunit (delta-coat protein) (delta-cop) (archain). [source:swissprot;acc:p48444]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1078\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent peptidyl-prolyl cis-trans isomerase e (ec 5.2.1.8) (ppiase e) (rotamase e) (cyclophilin e) (cyclophilin 33). [source:swissprot;acc:q9unp9]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1079\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent coatomer zeta-2 subunit (zeta-2 coat protein) (zeta-2 cop). [source:swissprot;acc:q9p299]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1080\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent zinc finger protein 444; endothelial zinc finger protein 2. [source:refseq;acc:nm\_018337]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 269.896\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 278.093\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03037\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1081\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 40s ribosomal protein s30. [source:swissprot;acc:q05472]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 223.44\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 216.875\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03027\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1082\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent phafin 2; ph and fyve domain-containing protein 2. [source:refseq;acc:nm\_024613]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 220.118\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 213.685\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.03011\vspace{3pt}}\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/