Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


Navigation/Query Panel:
Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 975 to 1024 of 3228 in total
Value Type: Measured
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1
\def\wcA{0.16666666666667\textwidth} \def\wcB{0.16666666666667\textwidth} \def\wcC{0.16666666666667\textwidth} \def\wcD{0.16666666666667\textwidth} \def\wcE{0.16666666666667\textwidth} \begin{longtable}{|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent 975\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dimethylaniline monooxygenase [n-oxide forming] 1 (ec 1.14.13.8) (fetal hepatic flavin-containing monooxygenase 1) (fmo 1) (dimethylaniline oxidase 1). [source:swissprot;acc:q01740]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5365.14\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5884.43\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09679\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 976\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dimethylaniline monooxygenase [n-oxide forming] 4 (ec 1.14.13.8) (hepatic flavin-containing monooxygenase 4) (fmo 4) (dimethylaniline oxidase 4). [source:swissprot;acc:p31512]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5365.22\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5884.32\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09675\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 977\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent u3 small nucleolar ribonucleoprotein protein mpp10 (m phase phosphoprotein 10). [source:swissprot;acc:o00566]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4115.9\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 4513.14\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09651\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 978\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent vesicle-associated membrane protein 2 (vamp-2) (synaptobrevin 2). [source:swissprot;acc:p19065]\vspace{3pt}}&\multirow{6}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 6654.42\vspace{3pt}}}&\multirow{6}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 7296.51\vspace{3pt}}}&\multirow{6}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.09649\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 979\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent vesicle-associated membrane protein 1 (vamp-1) (synaptobrevin 1). [source:swissprot;acc:p23763]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 980\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent vesicule-associated membrane protein 4 (vamp-4). [source:swissprot;acc:o75379]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 981\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent cdp-diacylglycerol--inositol 3-phosphatidyltransferase (ec 2.7.8.11) (phosphatidylinositol synthase) (ptdins synthase) (pi synthase). [source:swissprot;acc:o14735]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 982\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent adp-ribosylation factor gtpase activating protein 1 (adp-ribosylation factor 1 gtpase activating protein) (arf1 gap) (arf1-directed gtpase- activating protein) (gap protein). [source:swissprot;acc:q8n6t3]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 983\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent vesicle-associated membrane protein 3 (vamp-3) (synaptobrevin 3) (cellubrevin) (ceb). [source:swissprot;acc:q15836]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 984\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent integral membrane protein 2b (transmembrane protein bri) [contains: abri/adan amyloid peptide]. [source:swissprot;acc:q9y287]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 6362.64\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 6976.1\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.09642\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 985\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent integral membrane protein 2c (transmembrane protein bri3) (npd018). [source:swissprot;acc:q9nqx7]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 986\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent integral membrane protein 2a (e25 protein). [source:swissprot;acc:o43736]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 987\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent maguk p55 subfamily member 3 (mpp3 protein) (discs, large homolog 3). [source:swissprot;acc:q13368]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6660.04\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7301.81\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09636\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 988\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ubiquitin-conjugating enzyme e2 n (ec 6.3.2.19) (ubiquitin-protein ligase n) (ubiquitin carrier protein n) (ubc13) (bendless-like ubiquitin conjugating enzyme). [source:swissprot;acc:q16781]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6229.69\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6829.58\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0963\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 989\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent signal transducing adaptor molecule 2; stam-like protein containing sh3 and itam domains 2. [source:refseq;acc:nm\_005843]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 11743.3\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 10712.3\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09624\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 990\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent dead-box protein 4 (vasa homolog). [source:swissprot;acc:q9nqi0]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5147.9\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5641.25\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09584\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 991\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent transformer-2 protein homolog (tra-2 alpha). [source:swissprot;acc:q13595]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6472.38\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7092.65\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09583\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 992\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent putative sialoglycoprotease type 2. [source:refseq;acc:nm\_022353]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5393.37\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5909.47\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09569\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 993\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent arginine/serine-rich splicing factor 10 (transformer-2-beta) (htra2- beta) (transformer 2 protein homolog) (silica-induced protein 41) (ra301). [source:swissprot;acc:q15815]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6499.89\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7121.77\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09568\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 994\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent interleukin-4 induced protein 1 precursor (fig-1 protein). [source:swissprot;acc:q96rq9]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5800.95\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6355.71\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09563\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 995\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent annexin a11 (annexin xi) (calcyclin-associated annexin 50) (cap-50) (56 kda autoantigen). [source:swissprot;acc:p50995]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5778.65\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6328.56\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09516\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 996\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent methionyl-trna formyltransferase, mitochondrial precursor (ec 2.1.2.9) (mtfmt). [source:swissprot;acc:q96dp5]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5110.6\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5596.73\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09512\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 997\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent nucleolar protein family a, member 2; component of the h/aca snornp. [source:refseq;acc:nm\_017838]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5144.74\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 5634\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.0951\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 998\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent transcription initiation factor iif, alpha subunit (tfiif-alpha) (transcription initiation factor rap74). [source:swissprot;acc:p35269]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 999\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent triacylglycerol lipase, gastric precursor (ec 3.1.1.3) (gastric lipase) (gl). [source:swissprot;acc:p07098]\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5680.76\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 6220.45\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.095\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1000\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ba304i5.1 (novel lipase) (fragment). [source:sptrembl;acc:q96lg2]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1001\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent lysosomal acid lipase/cholesteryl ester hydrolase precursor (ec 3.1.1.13) (lal) (acid cholesteryl ester hydrolase) (sterol esterase) (lipase a) (cholesteryl esterase). [source:swissprot;acc:p38571]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1002\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent seryl-trna synthetase, mitochondrial precursor (ec 6.1.1.11) (serine--trna ligase) (serrsmt). [source:swissprot;acc:q9np81]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1003\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent seryl-trna synthetase (ec 6.1.1.11) (serine--trna ligase) (serrs). [source:swissprot;acc:p49591]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1004\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent o-sialoglycoprotein endopeptidase. [source:refseq;acc:nm\_017807]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5391.64\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5903.72\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09498\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1005\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent annexin a7 (annexin vii) (synexin). [source:swissprot;acc:p20073]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5780.34\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6329.3\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09497\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1006\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent peripheral plasma membrane protein cask (ec 2.7.1.-) (hcask) (calcium/calmodulin-dependent serine protein kinase) (lin-2 homolog). [source:swissprot;acc:o14936]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5707.73\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 6249.1\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.09485\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1007\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent hypoxia-inducible factor-3 alpha isoform a; inhibitory pas domain protein. [source:refseq;acc:nm\_152794]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1008\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent single-minded homolog 1. [source:swissprot;acc:p81133]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1009\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent synapsin iii. [source:swissprot;acc:o14994]\vspace{3pt}}&\multirow{13}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5791.82\vspace{3pt}}}&\multirow{13}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 6340.86\vspace{3pt}}}&\multirow{13}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.0948\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1010\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent aspartate beta-hydroxylase isoform b; junctin isoform 1; junctate; aspartyl/asparaginyl-beta-hydroxylase; peptide-aspartate beta-dioxygenase; humbug. [source:refseq;acc:nm\_032468]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1011\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent hairy/enhancer-of-split related with yrpw motif 1 (hairy and enhancer of split related-1) (hesr-1) (cardiovascular helix-loop-helix factor 2) (hes-related repressor protein 2 herp2). [source:swissprot;acc:q9y5j3]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1012\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent actin binding lim protein 2. [source:refseq;acc:nm\_032432]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1013\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent hairy/enhancer-of-split related with yrpw motif-like. [source:refseq;acc:nm\_014571]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1014\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent synapsin ii. [source:swissprot;acc:q92777]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1015\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent mitochondrial ribosome recycling factor. [source:refseq;acc:nm\_138777]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1016\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent peroxisomal targeting signal 1 receptor (peroxismore receptor 1) (peroxisomal c-terminal targeting signal import receptor) (pts1-bp) (peroxin-5) (pts1 receptor). [source:swissprot;acc:p50542]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1017\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent hairy/enhancer-of-split related with yrpw motif 2; gridlock; hes-related repressor protein 1. [source:refseq;acc:nm\_012259]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1018\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent transcription factor hes-1 (hairy and enhancer of split 1) (hairy- like) (hhl) (hairy homolog). [source:swissprot;acc:q14469]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1019\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent delta3,5-delta2,4-dienoyl-coa isomerase, mitochondrial precursor (ec 5.3.3.-). [source:swissprot;acc:q13011]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1020\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent actin-binding lim protein 1 isoform a; lim actin-binding protein 1; limatin; actin-binding lim protein. [source:refseq;acc:nm\_002313]\vspace{3pt}}&&&\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent 1021\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent synapsin i (brain protein 4.1). [source:swissprot;acc:p17600]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1022\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent protein kinase clk2 (ec 2.7.1.-) (cdc-like kinase 2). [source:swissprot;acc:p49760]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6435.94\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7045.75\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09475\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1023\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent protein kinase clk3 (ec 2.7.1.-) (cdc-like kinase 3). [source:swissprot;acc:p49761]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6435.02\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7044.65\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09474\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 1024\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent cysteine-rich protein 1 (cysteine-rich intestinal protein) (crip) (cysteine-rich heart protein) (hcrhp). [source:swissprot;acc:p50238]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5706.5\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6245.55\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09446\vspace{3pt}}\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/