Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Value Type Interaction Map description Network Comparison Type Rank Gene Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 912 to 961 of 3228 in total
Value Type: Measured
Interaction Map: High confidence
Network Comparison Type: Divided
Filtered: 1
\def\wcA{0.16666666666667\textwidth} \def\wcB{0.16666666666667\textwidth} \def\wcC{0.16666666666667\textwidth} \def\wcD{0.16666666666667\textwidth} \def\wcE{0.16666666666667\textwidth} \begin{longtable}{|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent eh-domain containing protein 4 (eh domain-containing protein fksg7) (hepatocellular carcinoma-associated protein 10/11). [source:swissprot;acc:q9h223]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2516\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6203.95\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6360.24\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.02519\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent eif-5a2 protein. [source:refseq;acc:nm\_020390]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1610\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6222.4\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6665.83\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.07126\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent elac homolog 2; putative prostate cancer susceptibility protein; elac (e. coli) homolog 2. [source:refseq;acc:nm\_018127]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2206\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5076.73\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5326.29\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.04916\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent elav-like protein 1 (hu-antigen r) (hur). [source:swissprot;acc:q15717]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2178\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5893.23\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6193.33\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05092\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent elav-like protein 2 (hu-antigen b) (hub) (elav-like neuronal protein 1) (nervous system-specific rna binding protein hel-n1). [source:swissprot;acc:q12926]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2180\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5900.25\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6200.24\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05084\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent elav-like protein 3 (hu-antigen c) (huc) (paraneoplastic cerebellar degeneration-associated antigen) (paraneoplastic limbic encephalitis antigen 21). [source:swissprot;acc:q14576]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2177\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5887.43\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6187.82\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05102\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent elav-like protein 4 (paraneoplastic encephalomyelitis antigen hud) (hu-antigen d). [source:swissprot;acc:p26378]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2179\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5896.51\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6196.59\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05089\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent electron transfer flavoprotein alpha-subunit, mitochondrial precursor (alpha-etf). [source:swissprot;acc:p13804]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1749\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 7919.76\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 8452.01\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06721\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent electron transfer flavoprotein beta-subunit (beta-etf). [source:swissprot;acc:p38117]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1761\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 7794.41\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 8316.04\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06692\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial precursor (ec 1.5.5.1) (etf-qo) (etf-ubiquinone oxidoreductase) (etf dehydrogenase) (electron-transferring- flavoprotein dehydrogenase). [source:swissprot;acc:q16134]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1301\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6618.74\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7161.67\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.08203\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent elks protein. [source:refseq;acc:nm\_015064]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1163\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5832.13\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6343.59\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0877\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent ell-associated factor 2; uncharacterized bone marrow protein bm040; testosterone regulated apoptosis inducer and tumor suppressor. [source:refseq;acc:nm\_018456]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2921\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent elongation factor 1-alpha 1 (ef-1-alpha-1) (elongation factor 1 a-1) (eef1a-1) (elongation factor tu) (ef-tu). [source:swissprot;acc:p04720]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1733\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 5874.83\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 6272.26\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1.06765\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent elongation factor 1-alpha 2 (ef-1-alpha-2) (elongation factor 1 a-2) (eef1a-2) (statin s1). [source:swissprot;acc:q05639]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1735\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent elongation factor 2 (ef-2). [source:swissprot;acc:p13639]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1069\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5494.73\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6001.08\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.09215\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent elongation factor ts, mitochondrial precursor (ef-ts) (ef-tsmt). [source:swissprot;acc:p43897]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 3027\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent elongation of very long chain fatty acids protein 1 (cgi-88). [source:swissprot;acc:q9bw60]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 458\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4890.55\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5610.96\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.14731\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent elongation protein 4 homolog; pax6 neighbor gene; chromosome 11 open reading frame 19. [source:refseq;acc:nm\_019040]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1344\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5887.86\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6354.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.07925\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent endo-beta-n-acetylglucosaminidase. [source:refseq;acc:nm\_022759]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 520\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 9642.22\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 10986.4\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.13941\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent endonuclease g, mitochondrial precursor (ec 3.1.30.-) (endo g). [source:swissprot;acc:q14249]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2695\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5176.92\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5154.43\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.00436\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent endosome-associated fyve-domain protein. [source:refseq;acc:nm\_014733]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 3200\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent endothelial-derived gene 1. [source:refseq;acc:nm\_025205]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1807\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6399.54\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6818.17\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06542\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent enhancer of filamentation 1 (hef1) (crk-associated substrate-related protein) (cas-l) (casl) (pp105) (neural precursor cell expressed developmentally down-regulated 9). [source:swissprot;acc:q14511]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 202\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4812.01\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6076.09\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.26269\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent enhancer of rudimentary homolog. [source:swissprot;acc:q14259]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2072\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6437.24\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6797.24\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05592\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent enhancer of zeste homolog 1 (enx-2). [source:swissprot;acc:q92800]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 3090\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}}\\\cline{1-2} \parbox{\wcA}{\vspace{3pt}\noindent enhancer of zeste homolog 2 (enx-1). [source:swissprot;acc:q15910]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 3098\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent enigma protein; lim domain protein. [source:refseq;acc:nm\_005451]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1596\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5665.34\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6070.32\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.07148\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent enoyl-coa hydratase, mitochondrial precursor (ec 4.2.1.17) (short chain enoyl-coa hydratase) (sceh) (enoyl-coa hydratase 1). [source:swissprot;acc:p30084]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 504\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 10067.9\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 11511\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.14334\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent enteropeptidase precursor (ec 3.4.21.9) (enterokinase). [source:swissprot;acc:p98073]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 347\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 4991.02\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5885.09\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.17914\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent enthoprotin; epsin 4; clathrin interacting protein localized in the trans-golgi region. [source:refseq;acc:nm\_014666]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2022\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5520.26\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5841.16\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05813\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent epidermal growth factor receptor kinase substrate eps8. [source:swissprot;acc:q12929]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1261\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5685.34\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6157.53\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.08305\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent epidermal growth factor receptor pathway substrate 8-like protein 1 isoform c; epidermal growth factor receptor pathway substrate 8-related protein 1; eps8-related protein 1. [source:refseq;acc:nm\_139204]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1259\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5685.38\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6157.7\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.08308\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent epidermal growth factor receptor pathway substrate 8-like protein 2; eps8-related protein 2; epidermal growth factor receptor pathway substrate 8-related protein 2. [source:refseq;acc:nm\_022772]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1270\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5685.08\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6156.48\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.08292\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent epidermal growth factor receptor precursor (ec 2.7.1.112) (receptor protein-tyrosine kinase erbb-1). [source:swissprot;acc:p00533]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1391\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5743.36\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6192.7\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.07824\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent epididymal secretory protein e1 precursor (niemann-pick disease type c2 protein) (epi-1) (he1) (epididymal secretory protein 14.6) (esp14.6). [source:swissprot;acc:q15668]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 872\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6781.05\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7480.15\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.1031\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent epithelial-cadherin precursor (e-cadherin) (uvomorulin) (cadherin-1) (cam 120/80). [source:swissprot;acc:p12830]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2173\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3641.4\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 3462.96\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05153\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent epoxide hydrolase 1 (ec 3.3.2.3) (microsomal epoxide hydrolase) (epoxide hydratase). [source:swissprot;acc:p07099]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1573\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 11785.4\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 10995.3\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.07186\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent epsin 1; eh domain-binding mitotic phosphoprotein. [source:refseq;acc:nm\_013333]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1801\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5881.33\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6268.57\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06584\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent epsin 2 isoform b; eps15 binding protein. [source:refseq;acc:nm\_014964]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1794\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5948.26\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6342.84\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06634\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent epsin 3. [source:refseq;acc:nm\_017957]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1809\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5816.12\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6196.21\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.06535\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent ergic-53 protein precursor (er-golgi intermediate compartment 53 kda protein) (lectin, mannose-binding 1) (gp58) (intracellular mannose specific lectin mr60). [source:swissprot;acc:p49257]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 3177\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent ero1-like. [source:refseq;acc:nm\_014584]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 855\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6562.98\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7242.37\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.10352\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent erythroid differentiation and denucleation factor 1. [source:swissprot;acc:o60584]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2128\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5328.73\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 5616.59\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.05402\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent erythroid differentiation-related factor 1. [source:refseq;acc:nm\_015608]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 3095\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 0.00001\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent espin. [source:refseq;acc:nm\_031475]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 1876\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6076.66\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6463.12\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.0636\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent esterase d (ec 3.1.1.1). [source:swissprot;acc:p10768]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2250\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6834.03\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7153.66\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.04677\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent estradiol 17 beta-dehydrogenase 1 (ec 1.1.1.62) (17-beta-hsd 1) (placental 17-beta-hydroxysteroid dehydrogenase) (20 alpha- hydroxysteroid dehydrogenase) (20-alpha-hsd) (e2dh). [source:swissprot;acc:p14061]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2520\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 5964.17\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 6113.96\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.02511\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent estradiol 17 beta-dehydrogenase 4 (ec 1.1.1.62) (17-beta-hsd 4) (17-beta-hydroxysteroid dehydrogenase 4). [source:swissprot;acc:p51659]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2538\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 7121.07\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7286.61\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.02325\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent estrogen-related receptor gamma (estrogen receptor related protein 3) (err gamma-2). [source:swissprot;acc:o75454]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 902\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 10246.1\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 11285.8\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.10147\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent ethanolamine kinase (ec 2.7.1.82) (eki). [source:swissprot;acc:q9hbu6]\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent 2328\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 6773.67\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 7075.51\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1.04456\vspace{3pt}}\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/