Scientific

MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


Navigation/Query Panel:
Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 2658 to 2707 of 6456 in total 
Value Type: Ranked
Interaction Map: High confidence
Filtered: 1

\def\wcA{0.14285714285714\textwidth}
\def\wcB{0.14285714285714\textwidth}
\def\wcC{0.14285714285714\textwidth}
\def\wcD{0.14285714285714\textwidth}
\def\wcE{0.14285714285714\textwidth}
\def\wcF{0.14285714285714\textwidth}
\begin{longtable}{|c|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Network Comparison Type\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
1329\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
dj947l8.1.1 (novel cub and sushi (scr repeat) domain protein) (fragment). [source:sptrembl;acc:q9h4v7]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
218.509\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
213.648\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.02275\vspace{3pt}}}\\\cline{1-2}\cline{4-4}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1330\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
calcipressin 1 (down syndrome critical region protein 1) (myocyte- enriched calcineurin interacting protein 1) (mcip1) (adapt78). [source:swissprot;acc:p53805]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
218.508\vspace{3pt}}&&\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
sal-like protein 2 (zinc finger protein sall2) (hsal2). [source:swissprot;acc:q9y467]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
218.471\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
213.876\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
4.595\vspace{3pt}}}\\\cline{1-2}\cline{4-5}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1331\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
arginine-glutamic acid dipeptide (re) repeats; atrophin 1-like; arginine glutamic acid dipeptide re repeats. [source:refseq;acc:nm\_012102]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
218.47\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
213.875\vspace{3pt}}&\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
calcipressin 3 (down syndrome candidate region 1-like protein 2) (myocyte-enriched calcineurin interacting protein 3) (mcip3). [source:swissprot;acc:q9uka8]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
218.509\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
213.649\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.02275\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1332\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
atrophin-1 (dentatorubral-pallidoluysian atrophy protein). [source:swissprot;acc:p54259]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
218.471\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
213.876\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
4.595\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
cytochrome oxidase biogenesis protein oxa1, mitochondrial precursor (oxa1-like protein) (oxa1hs). [source:swissprot;acc:q15070]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
220.681\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
215.78\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.02271\vspace{3pt}}}\\\cline{1-2}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1333\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
60s ribosomal protein l34, mitochondrial precursor (l34mt). [source:swissprot;acc:q9bq48]\vspace{3pt}}&&&&\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
dead (asp-glu-ala-asp) box polypeptide 47; hqp0256 protein. [source:refseq;acc:nm\_016355]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
218.47\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
213.875\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
4.595\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1334\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
jm4 protein. [source:refseq;acc:nm\_007213]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
199.643\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
204.163\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.02264\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
sal-like protein 1 (zinc finger protein sall1) (spalt-like transcription factor 1) (hsal1). [source:swissprot;acc:q9nsc2]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
218.47\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
213.875\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
4.595\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1335\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
cytoskeleton related vitamin a responsive protein; glutamate transporter eeac1-associated protein; dermal papilla derived protein 11; putative mapk activating protein pm27. [source:refseq;acc:nm\_006407]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
199.771\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
204.287\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.02261\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
sal-like protein 4 (zinc finger protein sall4). [source:swissprot;acc:q9ujq4]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
218.471\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
213.876\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
4.595\vspace{3pt}}}\\\cline{1-2}\cline{4-5}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1336\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
2-oxoisovalerate dehydrogenase beta subunit, mitochondrial precursor (ec 1.2.4.4) (branched-chain alpha-keto acid dehydrogenase e1 component beta chain) (bckdh e1-beta). [source:swissprot;acc:p21953]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
218.47\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
213.875\vspace{3pt}}&\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
n-acetylgalactosamine kinase (ec 2.7.1.-) (galnac kinase) (galactokinase 2). [source:swissprot;acc:q01415]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
215.162\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
210.412\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.02257\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1337\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
ccr4-not transcription complex, subunit 4; not4 (negative regulator of transcription 4, yeast) homolog; ccr4-not transcription complex, subunit. [source:refseq;acc:nm\_013316]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
218.47\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
213.875\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
4.595\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
galactose-1-phosphate uridylyltransferase (ec 2.7.7.12) (gal-1-p uridylyltransferase) (udp-glucose--hexose-1-phosphate uridylyltransferase). [source:swissprot;acc:p07902]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
215.162\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
210.412\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.02257\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1338\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
phosphatidylinositol-binding clathrin assembly protein (clathrin assembly lymphoid myeloid leukemia protein). [source:swissprot;acc:q13492]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
218.47\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
213.875\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
4.595\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
udp-glucose 4-epimerase (ec 5.1.3.2) (galactowaldenase) (udp- galactose 4-epimerase). [source:swissprot;acc:q14376]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
215.162\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
210.412\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.02257\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1339\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
clathrin coat assembly protein ap180 (clathrin coat associated protein ap180) (91 kda synaptosomal-associated protein). [source:swissprot;acc:o60641]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
218.471\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
213.876\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
4.595\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
epididymal secretory protein e1 precursor (niemann-pick disease type c2 protein) (epi-1) (he1) (epididymal secretory protein 14.6) (esp14.6). [source:swissprot;acc:q15668]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
205.204\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
200.71\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.02239\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1340\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
histone-lysine n-methyltransferase, h3 lysine-9 specific 2 (ec 2.1.1.43) (histone h3-k9 methyltransferase 2) (h3-k9-hmtase 2) (suppressor of variegation 3-9 homolog 2) (su(var)3-9 homolog 2). [source:swissprot;acc:q9h5i1]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
226.433\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
231.491\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.02234\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
membrane-associated nucleic acid binding protein. [source:refseq;acc:nm\_018835]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
218.47\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
213.875\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
4.595\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1341\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
eukaryotic translation initiation factor 2 subunit 1 (eukaryotic translation initiation factor 2 alpha subunit) (eif-2-alpha) (eif- 2alpha) (eif-2a). [source:swissprot;acc:p05198]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
226.433\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
231.491\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.02234\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
polypyrimidine tract-binding protein 1 (ptb) (heterogeneous nuclear ribonucleoprotein i) (hnrnp i) (57 kda rna-binding protein pptb-1). [source:swissprot;acc:p26599]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
218.47\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
213.875\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
4.595\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1342\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
histone-lysine n-methyltransferase, h3 lysine-9 specific 1 (ec 2.1.1.43) (histone h3-k9 methyltransferase 1) (h3-k9-hmtase 1) (suppressor of variegation 3-9 homolog 1) (su(var)3-9 homolog 1). [source:swissprot;acc:o43463]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
226.433\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
231.491\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.02234\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
sal-like protein 3 (zinc finger protein sall3) (hsall3). [source:swissprot;acc:q9bxa9]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
218.47\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
213.876\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
4.594\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1343\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
m-phase inducer phosphatase 1 (ec 3.1.3.48) (dual specificity phosphatase cdc25a). [source:swissprot;acc:p30304]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
258.558\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
252.916\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.02231\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
ubiquitin carboxyl-terminal hydrolase 8 (ec 3.1.2.15) (ubiquitin thiolesterase 8) (ubiquitin-specific processing protease 8) (deubiquitinating enzyme 8). [source:swissprot;acc:p40818]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
218.47\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
213.876\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
4.594\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1344\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
exonuclease 1 isoform b; rad2 nuclease family member, homolog of s. cerevisiae exonuclease 1. [source:refseq;acc:nm\_006027]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
216.772\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
221.594\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.02224\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
rod1 regulator of differentiation 1; fission yeast differentiation regulator; regulator of differentiation (in s. pombi) 1; regulator of differentiation (in s. pombe) 1. [source:refseq;acc:nm\_005156]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
218.47\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
213.876\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
4.594\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1345\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
phd finger protein 9. [source:refseq;acc:nm\_018062]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
216.772\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
221.594\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.02224\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
polypyrimidine tract binding protein 2; neural polypyrimidine tract binding protein; ptb-like protein. [source:refseq;acc:nm\_021190]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
218.47\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
213.876\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
4.594\vspace{3pt}}}\\\cline{1-2}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1346\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
adaptor-associated kinase 1. [source:refseq;acc:nm\_014911]\vspace{3pt}}&&&&\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
small optic lobes homolog; small optic lobes, drosophila, homolog of. [source:refseq;acc:nm\_005632]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
216.772\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
221.594\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.02224\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1347\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
lipoic acid synthetase, mitochondrial (lip-syn) (lipoate synthase) (hussy-01) (fragment). [source:swissprot;acc:o43766]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
204.961\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
209.517\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.02223\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
rho-gtpase activating protein 10. [source:refseq;acc:nm\_020824]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
218.47\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
213.876\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
4.594\vspace{3pt}}}\\\cline{1-2}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1348\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
growth-arrest-specific protein 7 (gas-7). [source:swissprot;acc:o60861]\vspace{3pt}}&&&&\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein zic 1 (zinc finger protein of the cerebellum 1). [source:swissprot;acc:q15915]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
218.569\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
213.832\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.02215\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1349\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
40s ribosomal protein s8. [source:swissprot;acc:p09058]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
218.64\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
214.049\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
4.591\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein zic 3 (zinc finger protein of the cerebellum 3). [source:swissprot;acc:o60481]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
218.572\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
213.841\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.02212\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1350\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
eyes absent homolog 1. [source:swissprot;acc:q99502]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
218.463\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
213.872\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
4.591\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
zinc finger protein zic 2 (zinc finger protein of the cerebellum 2). [source:swissprot;acc:o95409]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
218.574\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
213.847\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.0221\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1351\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
eyes absent homolog 4. [source:swissprot;acc:o95677]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
218.449\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
213.864\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
4.585\vspace{3pt}}\\\cline{2-6}
&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent
prohibitin. [source:swissprot;acc:p35232]\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
211.513\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
206.941\vspace{3pt}}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.02209\vspace{3pt}}\\\cline{1-1}\cline{3-3}\cline{6-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1352\vspace{3pt}}}&&\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}&&&\parbox{\wcF}{\vspace{3pt}\noindent
4.572\vspace{3pt}}\\\cline{2-3}\cline{6-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
repressor of estrogen receptor activity; b-cell associated protein. [source:refseq;acc:nm\_007273]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Divided\vspace{3pt}}}&&&\parbox{\wcF}{\vspace{3pt}\noindent
1.02209\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
1353\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
heparin sulfate n-deacetylase/n-sulfotransferase (ec 2.8.2.-) (n- hsst) (n-heparin sulfate sulfotransferase) (glucosaminyl n- deacetylase/n-sulfotransferase). [source:swissprot;acc:p52849]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
228.409\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
223.475\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.02208\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
repressor of estrogen receptor activity; b-cell associated protein. [source:refseq;acc:nm\_007273]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Subtracted\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
211.513\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
206.941\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
4.572\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\parbox{\wcA}{\vspace{3pt}\noindent
1354\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
eyes absent homolog 2. [source:swissprot;acc:o00167]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
218.417\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
213.848\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
4.569\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/