Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 73 to 122 of 12912 in total
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1
\def\wcA{0.14285714285714\textwidth} \def\wcB{0.14285714285714\textwidth} \def\wcC{0.14285714285714\textwidth} \def\wcD{0.14285714285714\textwidth} \def\wcE{0.14285714285714\textwidth} \def\wcF{0.14285714285714\textwidth} \begin{longtable}{|c|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Value Type\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 19\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent glycogen phosphorylase, brain form (ec 2.4.1.1). [source:swissprot;acc:p11216]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 185.678\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 245.247\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.32082\vspace{3pt}}\\\cline{2-6} &\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent microfibril-associated glycoprotein 4 precursor. [source:swissprot;acc:p55083]\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 677.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1865.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.75351\vspace{3pt}}\\\cline{3-6} &&\parbox{\wcC}{\vspace{3pt}\noindent Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 108.641\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 823.69\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 7.58176\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent protein kinase, interferon-inducible double stranded rna dependent activator; protein activator of the interferon-induced protein kinase. [source:refseq;acc:nm\_003690]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 25.6987\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 43.561\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.69507\vspace{3pt}}\\\hline \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 20\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent glycogen phosphorylase, liver form (ec 2.4.1.1). [source:swissprot;acc:p06737]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 185.678\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 245.247\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.32082\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-7 subunit. [source:swissprot;acc:o60262]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 40.3337\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 24.2744\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.66157\vspace{3pt}}\\\cline{2-6} &\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent protein phosphatase 1, regulatory subunit 14d; pkc-dependent pp1 inhibitory protein. [source:refseq;acc:nm\_017726]\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 677.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1865.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.75351\vspace{3pt}}\\\cline{3-6} &&\parbox{\wcC}{\vspace{3pt}\noindent Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 108.641\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 823.69\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 7.58176\vspace{3pt}}\\\hline \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 21\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent ficolin 2 precursor (collagen/fibrinogen domain-containing protein 2) (ficolin-b) (ficolin b) (serum lectin p35) (ebp-37) (hucolin) (l- ficolin). [source:swissprot;acc:q15485]\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 677.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1865.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.75351\vspace{3pt}}\\\cline{3-6} &&\parbox{\wcC}{\vspace{3pt}\noindent Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 108.641\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 823.69\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 7.58176\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-12 subunit. [source:swissprot;acc:q9ubi6]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 40.3337\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 24.2744\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.66157\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent myosin xv (unconventional myosin-15). [source:swissprot;acc:q9ukn7]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Ranked\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 185.678\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 245.247\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 1.32082\vspace{3pt}}}\\\cline{1-2} \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 22\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent glycogen phosphorylase, muscle form (ec 2.4.1.1) (myophosphorylase). [source:swissprot;acc:p11217]\vspace{3pt}}&&&&\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-4 subunit. [source:swissprot;acc:p50150]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 40.3357\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 24.2915\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.66049\vspace{3pt}}\\\cline{2-6} &\multirow{2}{*}{\parbox{\wcB}{\vspace{3pt}\noindent protein phosphatase 1, regulatory (inhibitor) subunit 14c; serologically defined breast cancer antigen ny-br-81; pkc-potentiated pp1 inhibitory protein. [source:refseq;acc:nm\_030949]\vspace{3pt}}}&\parbox{\wcC}{\vspace{3pt}\noindent Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 677.5\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1865.5\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.75351\vspace{3pt}}\\\cline{3-6} &&\parbox{\wcC}{\vspace{3pt}\noindent Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 108.641\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 823.69\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 7.58176\vspace{3pt}}\\\hline \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 23\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent 28s ribosomal protein s17, mitochondrial precursor (mrp-s17) (hspc011). [source:swissprot;acc:q9y2r5]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 58\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 44\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.31818\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent gbp protein isoform a. [source:refseq;acc:nm\_017870]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 699.76\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 1894.39\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.7072\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-3 subunit. [source:swissprot;acc:p29798]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 40.3358\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 24.2919\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.66046\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent neurogenic differentiation factor 2 (neurod2). [source:swissprot;acc:q15784]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Squared\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 143.692\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 457.521\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 3.18404\vspace{3pt}}}\\\cline{1-2} \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 24\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent chromodomain helicase-dna-binding protein 3 (chd-3) (mi-2 autoantigen 240 kda protein) (mi2-alpha). [source:swissprot;acc:q12873]\vspace{3pt}}&&&&\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-8 subunit (gamma-9). [source:swissprot;acc:q9uk08]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 40.336\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 24.2941\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.66032\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent pantothenate kinase 1 (ec 2.7.1.33) (pantothenic acid kinase 1) (hpank1) (hpank). [source:swissprot;acc:q8te04]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 58\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 44\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.31818\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent protein kinase, interferon-inducible double stranded rna dependent activator; protein activator of the interferon-induced protein kinase. [source:refseq;acc:nm\_003690]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 950.561\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 2108.52\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.21818\vspace{3pt}}\\\hline \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 25\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent doc-1 related protein (doc-1r). [source:swissprot;acc:o75956]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 143.692\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 457.521\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 3.18404\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-5 subunit. [source:swissprot;acc:p30670]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 40.3361\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 24.295\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.66026\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-7 subunit. [source:swissprot;acc:o60262]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 1833.01\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 892.67\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.0534\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent pantothenate kinase 2, mitochondrial precursor (ec 2.7.1.33) (pantothenic acid kinase 2) (hpank2). [source:swissprot;acc:q9bz23]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 58\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 44\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.31818\vspace{3pt}}\\\hline \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 26\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-10 subunit. [source:swissprot;acc:p50151]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 40.3362\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 24.2954\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.66024\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-12 subunit. [source:swissprot;acc:q9ubi6]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 1833.01\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 892.67\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.0534\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent neurogenic differentiation factor 6 (neurod6) (my051 protein). [source:swissprot;acc:q96nk8]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 143.692\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 457.521\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 3.18404\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent pantothenate kinase 3 (ec 2.7.1.33) (pantothenic acid kinase 3) (hpank3). [source:swissprot;acc:q9h999]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 58\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 44\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.31818\vspace{3pt}}\\\hline \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 27\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-4 subunit. [source:swissprot;acc:p50150]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 1834.33\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 895.134\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.04922\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-5 like subunit. [source:swissprot;acc:q9y3k8]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 40.3364\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 24.2968\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.66015\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent mitochondrial solute carrier protein. [source:refseq;acc:nm\_145305]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 58\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 44\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.31818\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent neurogenic differentiation factor 1 (neurod1) (neurod). [source:swissprot;acc:q13562]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 143.692\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 457.521\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 3.18404\vspace{3pt}}\\\hline \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 28\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent cyclic-amp-dependent transcription factor atf-3 (activating transcription factor 3). [source:swissprot;acc:p18847]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 201.949\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 153.671\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.31416\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-11 subunit. [source:swissprot;acc:p50152]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 40.3372\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 24.3043\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.65967\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-3 subunit. [source:swissprot;acc:p29798]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 1834.36\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 895.194\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.04912\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent neurogenic differentiation factor 4 (neurod4). [source:swissprot;acc:q9hd90]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent Squared\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 143.692\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 457.521\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 3.18404\vspace{3pt}}}\\\cline{1-2} \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 29\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent chromodomain helicase dna binding protein 5. [source:refseq;acc:nm\_015557]\vspace{3pt}}&&&&\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-8 subunit (gamma-9). [source:swissprot;acc:q9uk08]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 1834.52\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 895.507\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.04858\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent protein phosphatase 1, regulatory (inhibitor) subunit 14a; 17-kda pkc-potentiated inhibitory protein of pp1. [source:refseq;acc:nm\_033256]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 26.0288\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 43.1914\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.65937\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent uncharacterized hematopoietic stem/progenitor cells protein mds026. [source:sptrembl;acc:q9nz48]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 187.458\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 243.678\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.29991\vspace{3pt}}\\\hline \multirow{4}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 30\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent cyclin-dependent kinase 2-associated protein 1 (cdk2-associated protein 1) (putative oral cancer suppressor) (deleted in oral cancer- 1) (doc-1). [source:swissprot;acc:o14519]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 143.692\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 457.521\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 3.18404\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-5 subunit. [source:swissprot;acc:p30670]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 1834.59\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 895.633\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.04837\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent microfibril-associated glycoprotein 4 precursor. [source:swissprot;acc:p55083]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Rooted\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 26.0288\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 43.1914\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.65937\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent serine/threonine protein phosphatase 2a, 55 kda regulatory subunit b, alpha isoform (pp2a, subunit b, b-alpha isoform) (pp2a, subunit b, b55-alpha isoform) (pp2a, subunit b, pr55-alpha isoform) (pp2a, subunit b, r2-alpha isoform). [source:swissprot;acc:q00007]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Ranked\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 187.457\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 243.678\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.29991\vspace{3pt}}\\\hline \multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent 31\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent beta-arrestin 2 (arrestin, beta 2). [source:swissprot;acc:p32121]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Squared\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 9924.76\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 25146.6\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.53372\vspace{3pt}}\\\cline{2-6} &\parbox{\wcB}{\vspace{3pt}\noindent guanine nucleotide-binding protein g(i)/g(s)/g(o) gamma-10 subunit. [source:swissprot;acc:p50151]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent Measured\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 1834.63\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 895.697\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 2.04827\vspace{3pt}}\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/