Scientific

MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


Navigation/Query Panel:
Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 2277 to 2326 of 3228 in total 
Value Type: Measured
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1

\def\wcA{0.16666666666667\textwidth}
\def\wcB{0.16666666666667\textwidth}
\def\wcC{0.16666666666667\textwidth}
\def\wcD{0.16666666666667\textwidth}
\def\wcE{0.16666666666667\textwidth}
\begin{longtable}{|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2277\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
sal-like protein 3 (zinc finger protein sall3) (hsall3). [source:swissprot;acc:q9bxa9]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5783.72\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6048.9\vspace{3pt}}&\multirow{18}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.04585\vspace{3pt}}}\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2278\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
arginine-glutamic acid dipeptide (re) repeats; atrophin 1-like; arginine glutamic acid dipeptide re repeats. [source:refseq;acc:nm\_012102]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5783.76\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6048.94\vspace{3pt}}&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2279\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ubiquitin carboxyl-terminal hydrolase 8 (ec 3.1.2.15) (ubiquitin thiolesterase 8) (ubiquitin-specific processing protease 8) (deubiquitinating enzyme 8). [source:swissprot;acc:p40818]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
5783.73\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6048.91\vspace{3pt}}}&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2280\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
rod1 regulator of differentiation 1; fission yeast differentiation regulator; regulator of differentiation (in s. pombi) 1; regulator of differentiation (in s. pombe) 1. [source:refseq;acc:nm\_005156]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2281\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
polypyrimidine tract binding protein 2; neural polypyrimidine tract binding protein; ptb-like protein. [source:refseq;acc:nm\_021190]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2282\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
adaptor-associated kinase 1. [source:refseq;acc:nm\_014911]\vspace{3pt}}&&&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2283\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
atrophin-1 (dentatorubral-pallidoluysian atrophy protein). [source:swissprot;acc:p54259]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5783.7\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6048.88\vspace{3pt}}&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2284\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
dead (asp-glu-ala-asp) box polypeptide 47; hqp0256 protein. [source:refseq;acc:nm\_016355]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
5783.73\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6048.91\vspace{3pt}}}&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2285\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
rho-gtpase activating protein 10. [source:refseq;acc:nm\_020824]\vspace{3pt}}&&&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2286\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
sal-like protein 1 (zinc finger protein sall1) (spalt-like transcription factor 1) (hsal1). [source:swissprot;acc:q9nsc2]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5783.76\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6048.94\vspace{3pt}}&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2287\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
sal-like protein 4 (zinc finger protein sall4). [source:swissprot;acc:q9ujq4]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5783.7\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6048.88\vspace{3pt}}&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2288\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
2-oxoisovalerate dehydrogenase beta subunit, mitochondrial precursor (ec 1.2.4.4) (branched-chain alpha-keto acid dehydrogenase e1 component beta chain) (bckdh e1-beta). [source:swissprot;acc:p21953]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
5783.76\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6048.94\vspace{3pt}}}&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2289\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ccr4-not transcription complex, subunit 4; not4 (negative regulator of transcription 4, yeast) homolog; ccr4-not transcription complex, subunit. [source:refseq;acc:nm\_013316]\vspace{3pt}}&&&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2290\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
phosphatidylinositol-binding clathrin assembly protein (clathrin assembly lymphoid myeloid leukemia protein). [source:swissprot;acc:q13492]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5783.75\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6048.93\vspace{3pt}}&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2291\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
clathrin coat assembly protein ap180 (clathrin coat associated protein ap180) (91 kda synaptosomal-associated protein). [source:swissprot;acc:o60641]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5783.71\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6048.89\vspace{3pt}}&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2292\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
membrane-associated nucleic acid binding protein. [source:refseq;acc:nm\_018835]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
5783.76\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6048.94\vspace{3pt}}}&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2293\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
polypyrimidine tract-binding protein 1 (ptb) (heterogeneous nuclear ribonucleoprotein i) (hnrnp i) (57 kda rna-binding protein pptb-1). [source:swissprot;acc:p26599]\vspace{3pt}}&&&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2294\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
growth-arrest-specific protein 7 (gas-7). [source:swissprot;acc:o60861]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5783.73\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6048.91\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2295\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
glutathione s-transferase p (ec 2.5.1.18) (gst class-pi) (gstp1-1). [source:swissprot;acc:p09211]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6066.61\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6344.65\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04583\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2296\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
eyes absent homolog 4. [source:swissprot;acc:o95677]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5784.9\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6049.99\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04582\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2297\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
rhesus blood group-associated glycoprotein (erythrocyte plasma membrane 50 kda glycoprotein) (rh50a). [source:swissprot;acc:q02094]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6570.31\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6871.29\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04581\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2298\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
rhesus blood group, b glycoprotein; rh type b glycoprotein. [source:refseq;acc:nm\_020407]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6570.74\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6871.6\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04579\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2299\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
eyes absent homolog 2. [source:swissprot;acc:o00167]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5786.15\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6050.71\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04572\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2300\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
rh type c glycoprotein. [source:refseq;acc:nm\_016321]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6573.3\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6873.48\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04567\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2301\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
hydroxymethylglutaryl-coa synthase, mitochondrial precursor (ec 2.3.3.10) (hmg-coa synthase) (3-hydroxy-3-methylglutaryl coenzyme a synthase). [source:swissprot;acc:p54868]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
6946.6\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
7263.68\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.04565\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2302\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
3-hydroxy-3-methylglutaryl-coenzyme a reductase (ec 1.1.1.34) (hmg-coa reductase). [source:swissprot;acc:p04035]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2303\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
hydroxymethylglutaryl-coa synthase, cytoplasmic (ec 2.3.3.10) (hmg-coa synthase) (3-hydroxy-3-methylglutaryl coenzyme a synthase). [source:swissprot;acc:q01581]\vspace{3pt}}&&&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2304\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
acetyl-coa acetyltransferase, mitochondrial precursor (ec 2.3.1.9) (acetoacetyl-coa thiolase) (t2). [source:swissprot;acc:p24752]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6946.38\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7263.48\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2305\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
3-ketoacyl-coa thiolase, peroxisomal precursor (ec 2.3.1.16) (beta- ketothiolase) (acetyl-coa acyltransferase) (peroxisomal 3-oxoacyl- coa thiolase). [source:swissprot;acc:p09110]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6946.82\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7263.87\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04564\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2306\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
dna-directed rna polymerase ii 140 kda polypeptide (ec 2.7.7.6) (rna polymerase ii subunit 2) (rpb2). [source:swissprot;acc:p30876]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3619.07\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3461.21\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04561\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2307\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
fas apoptotic inhibitory molecule. [source:refseq;acc:nm\_018147]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
5666.91\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5923.48\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04528\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2308\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
60s ribosomal protein l7. [source:swissprot;acc:p18124]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3976.92\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3804.85\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04522\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2309\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
delta(14)-sterol reductase (ec 1.3.1.70) (c-14 sterol reductase) (sterol c14-reductase) (delta14-sr) (transmembrane 7 superfamily member 2) (another new gene 1) (putative sterol reductase sr-1). [source:swissprot;acc:o76062]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
6960.96\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
7273.7\vspace{3pt}}}&\multirow{8}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.04493\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2310\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
lamin b receptor (integral nuclear envelope inner membrane protein) (lmn2r). [source:swissprot;acc:q14739]\vspace{3pt}}&&&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2311\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
solute carrier family 27 member 3; fatty acid transport protein 3. [source:refseq;acc:nm\_024330]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6961.19\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7273.93\vspace{3pt}}&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2312\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
very-long-chain acyl-coa synthetase (ec 6.2.1.-) (very-long-chain- fatty-acid-coa ligase). [source:swissprot;acc:o14975]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6960.26\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7273.01\vspace{3pt}}&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2313\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
disrupter of silencing 10. [source:refseq;acc:nm\_020368]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6960.96\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7273.7\vspace{3pt}}&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2314\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
very long-chain acyl-coa synthetase homolog 1. [source:refseq;acc:nm\_014031]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6960.99\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7273.72\vspace{3pt}}&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2315\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
solute carrier family 27 (fatty acid transporter), member 5; very long-chain acyl-coa synthetase homolog 2; very long-chain acyl-coa synthetase-related protein; likely ortholog of mouse solute carrier family 27 (fatty acid transporter), member 5. [source:refseq;acc:nm\_012254]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6961.11\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7273.85\vspace{3pt}}&\\\cline{1-4}
\parbox{\wcA}{\vspace{3pt}\noindent
2316\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
similar to cg7020 gene product (fragment). [source:sptrembl;acc:q96ib4]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6960.74\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7273.48\vspace{3pt}}&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2317\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
solute carrier family 27 (fatty acid transporter), member 4; fatty acid transport protein 4. [source:refseq;acc:nm\_005094]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
6961.44\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7274.17\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04492\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2318\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
ubiquitin. [source:swissprot;acc:p02248]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
7484.98\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7821.11\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04491\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2319\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
putative pre-mrna splicing factor rna helicase (atp-dependent rna helicase #3) (deah-box protein 16). [source:swissprot;acc:o60231]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
6362.48\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6647.42\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.04478\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2320\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
t54 protein. [source:swissprot;acc:q92917]\vspace{3pt}}&&&\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2321\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
dna polymerase epsilon p17 subunit (dna polymerase epsilon subunit 3) (chromatin accessibility complex 17) (huchrac17) (chrac-17). [source:swissprot;acc:q9nrf9]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
3496.21\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
3652.28\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
1.04464\vspace{3pt}}\\\hline
\parbox{\wcA}{\vspace{3pt}\noindent
2322\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
mothers against decapentaplegic homolog 2 (smad 2) (mothers against dpp homolog 2) (mad-related protein 2) (hmad-2) (jv18-1) (hsmad2). [source:swissprot;acc:q15796]\vspace{3pt}}&\multirow{5}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
6773.67\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
7075.51\vspace{3pt}}}&\multirow{5}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
1.04456\vspace{3pt}}}\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2323\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
mothers against decapentaplegic homolog 1 (smad 1) (mothers against dpp homolog 1) (mad-related protein 1) (transforming growth factor- beta signaling protein-1) (bsp-1) (hsmad1) (jv4-1). [source:swissprot;acc:q15797]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2324\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
cop9 subunit 6 (mov34 homolog, 34 kd). [source:refseq;acc:nm\_006833]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2325\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
mothers against decapentaplegic homolog 3 (smad 3) (mothers against dpp homolog 3) (mad3) (hmad-3) (mmad3) (jv15-2) (hsmad3). [source:swissprot;acc:q92940]\vspace{3pt}}&&&\\\cline{1-2}
\parbox{\wcA}{\vspace{3pt}\noindent
2326\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
histone deacetylase 11 (hd11). [source:swissprot;acc:q96db2]\vspace{3pt}}&&&\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/