Scientific

MK5 Microarray Data


Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


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Rank Gene Hugo description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 2150 to 2199 of 3228 in total
Value Type: Ranked
Network Comparison Type: Divided
Interaction Map: High confidence
Filtered: 1
\def\wcA{0.14285714285714\textwidth} \def\wcB{0.14285714285714\textwidth} \def\wcC{0.14285714285714\textwidth} \def\wcD{0.14285714285714\textwidth} \def\wcE{0.14285714285714\textwidth} \def\wcF{0.14285714285714\textwidth} \begin{longtable}{|c|c|c|c|c|c|} \hline \parbox{\wcA}{\vspace{3pt}\noindent Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent Hugo\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent description\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent red\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent green\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent network\_comparison\vspace{3pt}}\\ \hline \hline \parbox{\wcA}{\vspace{3pt}\noindent 2150\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent PSMD14\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 26s proteasome-associated pad1 homolog. [source:refseq;acc:nm\_005805]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 217.871\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 219.366\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 1.00686\vspace{3pt}}}\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2151\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent APOB\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent apolipoprotein b-100 precursor (apo b-100) [contains: apolipoprotein b-48 (apo b-48)]. [source:swissprot;acc:p04114]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2152\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent VAMP2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent vesicle-associated membrane protein 2 (vamp-2) (synaptobrevin 2). [source:swissprot;acc:p19065]\vspace{3pt}}&\multirow{6}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 200.063\vspace{3pt}}}&\multirow{6}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 198.71\vspace{3pt}}}&\multirow{6}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 1.00681\vspace{3pt}}}\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2153\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent VAMP1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent vesicle-associated membrane protein 1 (vamp-1) (synaptobrevin 1). [source:swissprot;acc:p23763]\vspace{3pt}}&&&\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2154\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent VAMP4\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent vesicule-associated membrane protein 4 (vamp-4). [source:swissprot;acc:o75379]\vspace{3pt}}&&&\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2155\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent CDIPT\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent cdp-diacylglycerol--inositol 3-phosphatidyltransferase (ec 2.7.8.11) (phosphatidylinositol synthase) (ptdins synthase) (pi synthase). [source:swissprot;acc:o14735]\vspace{3pt}}&&&\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2156\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ARFGAP1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent adp-ribosylation factor gtpase activating protein 1 (adp-ribosylation factor 1 gtpase activating protein) (arf1 gap) (arf1-directed gtpase- activating protein) (gap protein). [source:swissprot;acc:q8n6t3]\vspace{3pt}}&&&\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2157\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent VAMP3\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent vesicle-associated membrane protein 3 (vamp-3) (synaptobrevin 3) (cellubrevin) (ceb). [source:swissprot;acc:q15836]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2158\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent LGALS4\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent galectin-4 (lactose-binding lectin 4) (l-36 lactose binding protein) (l36lbp) (antigen ny-co-27). [source:swissprot;acc:p56470]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 206.401\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 207.796\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.00676\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2159\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent MAPK3\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent mitogen-activated protein kinase 3 (ec 2.7.1.37) (extracellular signal-regulated kinase 1) (erk-1) (insulin-stimulated map2 kinase) (map kinase 1) (mapk 1) (p44-erk1) (ert2) (p44-mapk) (microtubule- associated protein-2 kinase). [source:swissprot;acc:p27361]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 215.921\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 214.474\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.00675\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2160\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent RPS6KA3\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent ribosomal protein s6 kinase alpha 3 (ec 2.7.1.37) (s6k-alpha 3) (90 kda ribosomal protein s6 kinase 3) (p90-rsk 3) (ribosomal s6 kinase 2) (rsk-2) (pp90rsk2) (insulin-stimulated protein kinase 1) (ispk-1). [source:swissprot;acc:p51812]\vspace{3pt}}&\multirow{8}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 215.925\vspace{3pt}}}&\multirow{8}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 214.481\vspace{3pt}}}&\multirow{15}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 1.00673\vspace{3pt}}}\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2161\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent CAMK2G\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent calcium/calmodulin-dependent protein kinase type ii gamma chain (ec 2.7.1.123) (cam-kinase ii gamma chain) (cam kinase ii gamma subunit) (camk-ii gamma subunit) (fragment). [source:swissprot;acc:q13555]\vspace{3pt}}&&&\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2162\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent CAMK2D\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent calcium/calmodulin-dependent protein kinase type ii delta chain (ec 2.7.1.123) (cam-kinase ii delta chain) (cam kinase ii delta subunit) (camk-ii delta subunit). [source:swissprot;acc:q13557]\vspace{3pt}}&&&\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2163\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent MAP3K6\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent mitogen-activated protein kinase kinase kinase 6 (ec 2.7.1.-). [source:swissprot;acc:o95382]\vspace{3pt}}&&&\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2164\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent \vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent signal-induced proliferation-associated 1-like 1. [source:refseq;acc:nm\_015556]\vspace{3pt}}&&&\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2165\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent RPS6KA1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent ribosomal protein s6 kinase alpha 1 (ec 2.7.1.37) (s6k-alpha 1) (90 kda ribosomal protein s6 kinase 1) (p90-rsk 1) (ribosomal s6 kinase 1) (rsk-1) (pp90rsk1). [source:swissprot;acc:q15418]\vspace{3pt}}&&&\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2166\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ABCD3\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent atp-binding cassette, sub-family d, member 3 (70 kda peroxisomal membrane protein) (pmp70). [source:swissprot;acc:p28288]\vspace{3pt}}&&&\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2167\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent GCDH\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent glutaryl-coa dehydrogenase, mitochondrial precursor (ec 1.3.99.7) (gcd). [source:swissprot;acc:q92947]\vspace{3pt}}&&&\\\cline{1-5} \parbox{\wcA}{\vspace{3pt}\noindent 2168\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent MAPK1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent mitogen-activated protein kinase 1 (ec 2.7.1.37) (extracellular signal-regulated kinase 2) (erk-2) (mitogen-activated protein kinase 2) (map kinase 2) (mapk 2) (p42-mapk) (ert1). [source:swissprot;acc:p28482]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 215.929\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 214.486\vspace{3pt}}&\\\cline{1-5} \parbox{\wcA}{\vspace{3pt}\noindent 2169\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent HAL\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent histidine ammonia-lyase (ec 4.3.1.3) (histidase). [source:swissprot;acc:p42357]\vspace{3pt}}&\multirow{6}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 215.925\vspace{3pt}}}&\multirow{6}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 214.481\vspace{3pt}}}&\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2170\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent RPS6KA6\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent ribosomal protein s6 kinase alpha 6 (ec 2.7.1.37) (s6k-alpha 6) (90 kda ribosomal protein s6 kinase 6) (p90-rsk 6) (ribosomal s6 kinase 4) (rsk-4) (pp90rsk4). [source:swissprot;acc:q9uk32]\vspace{3pt}}&&&\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2171\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent RPS6KA2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent ribosomal protein s6 kinase alpha 2 (ec 2.7.1.37) (s6k-alpha 2) (90 kda ribosomal protein s6 kinase 2) (p90-rsk 2) (ribosomal s6 kinase 3) (rsk-3) (pp90rsk3). [source:swissprot;acc:q15349]\vspace{3pt}}&&&\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2172\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent CAMK2A\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent calcium/calmodulin-dependent protein kinase type ii alpha chain (ec 2.7.1.123) (cam-kinase ii alpha chain) (cam kinase ii alpha subunit) (camk-ii alpha subunit). [source:swissprot;acc:q9uqm7]\vspace{3pt}}&&&\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2173\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent CAMK2B\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent calcium/calmodulin-dependent protein kinase type ii beta chain (ec 2.7.1.123) (cam-kinase ii beta chain) (cam kinase ii beta subunit) (camk-ii beta subunit). [source:swissprot;acc:q13554]\vspace{3pt}}&&&\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2174\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent \vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent mitogen-activated protein kinase kinase kinase 5 (ec 2.7.1.-) (mapk/erk kinase kinase 5) (mek kinase 5) (mekk 5) (apoptosis signal- regulating kinase 1) (ask-1). [source:swissprot;acc:q99683]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2175\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent PSMD2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 26s proteasome non-atpase regulatory subunit 2 (26s proteasome regulatory subunit s2) (26s proteasome subunit p97) (tumor necrosis factor type 1 receptor associated protein 2) (55.11 protein). [source:swissprot;acc:q13200]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 210.209\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 208.808\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.00671\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2176\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent PLK1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent serine/threonine-protein kinase plk (ec 2.7.1.-) (plk-1) (serine- threonine protein kinase 13) (stpk13). [source:swissprot;acc:p53350]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 218.089\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 216.64\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent 1.00669\vspace{3pt}}\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2177\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent PXMP2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent peroxisomal membrane protein 2 (22 kda peroxisomal membrane protein). [source:swissprot;acc:q9nr77]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 210.961\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 209.563\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 1.00667\vspace{3pt}}}\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2178\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent HSPA2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent heat shock-related 70 kda protein 2 (heat shock 70 kda protein 2). [source:swissprot;acc:p54652]\vspace{3pt}}&&&\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2179\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent \vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent heat shock 70 kda protein 1 (hsp70.1) (hsp70-1/hsp70-2). [source:swissprot;acc:p08107]\vspace{3pt}}&&&\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2180\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent HSPA8\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent heat shock cognate 71 kda protein. [source:swissprot;acc:p11142]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2181\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent CALR\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent calreticulin precursor (crp55) (calregulin) (hacbp) (erp60). [source:swissprot;acc:p27797]\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent 227.117\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent 225.62\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 1.00664\vspace{3pt}}}\\\cline{1-5} \parbox{\wcA}{\vspace{3pt}\noindent 2182\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent PEO1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent twinkle; likely ortholog of mouse t7 gp4-like protein with intramitochondrial nucleoid localization. [source:refseq;acc:nm\_021830]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 218.062\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 216.624\vspace{3pt}}}&\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2183\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent RABEP1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent rabaptin, rab gtpase binding effector protein 1; rabaptin-5; neurocrescin. [source:refseq;acc:nm\_004703]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2184\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent SUPV3L1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent suppressor of var1, 3-like 1. [source:refseq;acc:nm\_003171]\vspace{3pt}}&\multirow{4}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 211.713\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 210.318\vspace{3pt}}}&\multirow{4}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 1.00663\vspace{3pt}}}\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2185\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent BAG1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent bag-family molecular chaperone regulator-1 (bcl-2 binding athanogene- 1) (bag-1) (glucocorticoid receptor-associated protein rap46). [source:swissprot;acc:q99933]\vspace{3pt}}&&&\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2186\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent GSK3A\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent glycogen synthase kinase-3 alpha (ec 2.7.1.37) (gsk-3 alpha). [source:swissprot;acc:p49840]\vspace{3pt}}&&&\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2187\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent GSK3B\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent glycogen synthase kinase-3 beta (ec 2.7.1.37) (gsk-3 beta). [source:swissprot;acc:p49841]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2188\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent P4HB\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent protein disulfide isomerase precursor (pdi) (ec 5.3.4.1) (prolyl 4- hydroxylase beta subunit) (cellular thyroid hormone binding protein) (p55). [source:swissprot;acc:p07237]\vspace{3pt}}&\multirow{9}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 209.54\vspace{3pt}}}&\multirow{9}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 208.162\vspace{3pt}}}&\multirow{9}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 1.00662\vspace{3pt}}}\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2189\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent HAAO\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent 3-hydroxyanthranilate 3,4-dioxygenase (ec 1.13.11.6) (3-hao) (3-hydroxyanthranilic acid dioxygenase) (3-hydroxyanthranilate oxygenase). [source:swissprot;acc:p46952]\vspace{3pt}}&&&\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2190\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent ZFPL1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent zinc finger protein-like 1; zinc-finger protein in men1 region. [source:refseq;acc:nm\_006782]\vspace{3pt}}&&&\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2191\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent HUS1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent hus1 checkpoint protein; hus1 (s. pombe) checkpoint homolog; hus1+-like protein. [source:refseq;acc:nm\_004507]\vspace{3pt}}&&&\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2192\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent HABP4\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent hyaluronan binding protein 4; intracellular antigen detected by monoclonal antibody ki-1; intracellular hyaluronan-binding protein; chromodomain helicase dna binding protein 3 interacting protein. [source:refseq;acc:nm\_014282]\vspace{3pt}}&&&\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2193\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent P4HA1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent prolyl 4-hydroxylase alpha-1 subunit precursor (ec 1.14.11.2) (4-ph alpha-1) (procollagen-proline,2-oxoglutarate-4-dioxygenase alpha-1 subunit). [source:swissprot;acc:p13674]\vspace{3pt}}&&&\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2194\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent PROX1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent homeobox prospero-like protein prox1 (prox 1). [source:swissprot;acc:q92786]\vspace{3pt}}&&&\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2195\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent RAD1\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent rad1 homolog isoform 1; exonuclease homolog rad1; cell cycle checkpoint protein rad1 a/b; rad1-like protein; cell cycle checkpoint protein hrad1; dna repair exonuclease (rec1); dna repair protein rad1; rad1-like dna damage checkpoint protein. [source:refseq;acc:nm\_002853]\vspace{3pt}}&&&\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2196\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent P4HA2\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent prolyl 4-hydroxylase alpha-2 subunit precursor (ec 1.14.11.2) (4-ph alpha-2) (procollagen-proline,2-oxoglutarate-4-dioxygenase alpha-2 subunit). [source:swissprot;acc:o15460]\vspace{3pt}}&&&\\\hline \parbox{\wcA}{\vspace{3pt}\noindent 2197\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent COQ6\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent ubiquinone biosynthesis monooxgenase coq6 (ec 1.14.13.-) (cgi-10). [source:swissprot;acc:q9y2z9]\vspace{3pt}}&\multirow{3}{*}{\parbox{\wcD}{\vspace{3pt}\noindent 193.787\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcE}{\vspace{3pt}\noindent 195.064\vspace{3pt}}}&\multirow{3}{*}{\parbox{\wcF}{\vspace{3pt}\noindent 1.00659\vspace{3pt}}}\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2198\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent KMO\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent kynurenine 3-monooxygenase (kynurenine 3-hydroxylase). [source:refseq;acc:nm\_003679]\vspace{3pt}}&&&\\\cline{1-3} \parbox{\wcA}{\vspace{3pt}\noindent 2199\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent SQLE\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent squalene monooxygenase (ec 1.14.99.7) (squalene epoxidase) (se). [source:swissprot;acc:q14534]\vspace{3pt}}&&&\\\hline nd{longtable}
Legend:
- Rank is the rank after comparing the two networks
- Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray
- Hugo is the HGNC identifier if it exists
- Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.
- Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them
- Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.
- Filtered specifies whether we only included the high confidence microarry measurements or not.

- http://analysis.yellowcouch.org/