Scientific

MK5 Microarray Data

Affected Genes - Ontology Breakdown - Gene Enrichment - Proteome Analysis

These are the micro-array results of a differential gene expression microarray experiments and the subsequent analysis steps performed on them. The up/down- regulation ratio was obtained by measuring WT cells against MK5 activated cells. See material and methods for technical information as well as the data usage policy.

MK5 Proteome Analysis - Divided Values

Type II network, divided values. Interestingly most of the proteins in the first 100 positions in this table would occur in the divided ranks table between position 100 and 200, indicating a difference in emphasis between the two simulations but not in the overall function. The fully annotated table, include Ensembl gene identifiers and network values can be found in the supplementary data.


Navigation/Query Panel:
Click on the attribute name to hide/unhide it. The green arrows can be used to shift columns left/right. Exact word match is written as =..., regular expressions can be matched with ~.... To select all values larger or equal than use >.... This would be <... for values smaller or equal than. To select all values within a specific range use [...,...].
Rank Gene description Value Type Network Comparison Type Interaction Map Filtered red green network_comparison
Results: HTML CSV LaTeX Showing element 1675 to 1724 of 8289 in total 
Value Type: Measured
Network Comparison Type: Divided
Filtered: 1

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\def\wcB{0.14285714285714\textwidth}
\def\wcC{0.14285714285714\textwidth}
\def\wcD{0.14285714285714\textwidth}
\def\wcE{0.14285714285714\textwidth}
\def\wcF{0.14285714285714\textwidth}
\begin{longtable}{|c|c|c|c|c|c|}
\hline
\parbox{\wcA}{\vspace{3pt}\noindent
Rank\vspace{3pt}}&\parbox{\wcB}{\vspace{3pt}\noindent
description\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Interaction Map\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
red\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
green\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
network\_comparison\vspace{3pt}}\\
\hline
\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
838\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
g2/mitotic-specific cyclin b1. [source:swissprot;acc:p14635]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7785.58\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8102.78\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04074\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
pbk1 protein. [source:sptrembl;acc:o76021]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
4064.23\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
4493.36\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.10559\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
839\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
arginyl-trna synthetase-like; arginine-trna ligase. [source:refseq;acc:nm\_020320]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
7093.86\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
7842.67\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.10556\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
kh domain-containing, rna-binding, signal transduction-associated protein 2; sam68-like mammalian protein 1. [source:refseq;acc:nm\_152688]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
7593.65\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
7902.9\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04072\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
840\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
golgi reassembly stacking protein 2; golgi reassembly stacking protein 2, 55 kda. [source:refseq;acc:nm\_015530]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
8364.64\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8705.14\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04071\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
poly (adp-ribose) glycohydrolase. [source:refseq;acc:nm\_003631]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5786.67\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
6395.78\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.10526\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
841\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
beta-galactosidase precursor (ec 3.2.1.23) (lactase) (acid beta- galactosidase). [source:swissprot;acc:p16278]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7734.56\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8049.16\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04067\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
mto1 protein homolog (cgi-02). [source:swissprot;acc:q9y2z2]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
5786.67\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
6395.78\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.10526\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
842\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
loh1cr12. [source:refseq;acc:nm\_058169]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
5195.48\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
5741.63\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.10512\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
tsc22-related inducible leucine zipper protein 2 (tsc-22-like protein thg-1). [source:swissprot;acc:q9y3q8]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
7855.9\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8175.35\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04066\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
843\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
ergic-53 protein precursor (er-golgi intermediate compartment 53 kda protein) (lectin, mannose-binding 1) (gp58) (intracellular mannose specific lectin mr60). [source:swissprot;acc:p49257]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
7810.68\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8127.96\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04062\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
unr protein. [source:swissprot;acc:o75534]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
5195.48\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
5741.63\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.10512\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
844\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
preimplantation protein 3; likely ortholog of preimplantation protein 3. [source:refseq;acc:nm\_015387]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
6276.97\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
6934.8\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.1048\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
rna-binding protein. [source:refseq;acc:nm\_019027]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7860.05\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8179.08\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04059\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
845\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
dnaj homolog subfamily b member 11 precursor (er-associated dnaj protein 3) (erj3) (er-associated hsp40 co-chaperone) (hdj9) (pwp1- interacting protein 4). [source:swissprot;acc:q9ubs4]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
6276.97\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
6934.8\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.1048\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
trna isopentenylpyrophosphate transferase. [source:refseq;acc:nm\_017646]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
8223.84\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8557.68\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04059\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
846\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
apobec-1 complementation factor isoform 1; apobec-1 stimulating protein; apo-b rna editing protein. [source:refseq;acc:nm\_014576]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
7860.19\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8179.1\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04057\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
biotin--protein ligase (ec 6.3.4.-) (biotin apo-protein ligase) [includes: biotin--[methylmalonyl-coa-carboxyltransferase] ligase (ec 6.3.4.9); biotin--[propionyl-coa-carboxylase [atp-hydrolyzing]] ligase (ec 6.3.4.10) (holocarboxylase synthetase) (hcs); biotin--[methylcrotonoyl-coa-carboxylase] ligase (ec 6.3.4.11); biotin--[acetyl-coa-carboxylase] ligase (ec 6.3.4.15)]. [source:swissprot;acc:p50747]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
5607.43\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
6194.98\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.10478\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
847\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
cytoplasmic protein nck2 (nck adaptor protein 2) (sh2/sh3 adaptor protein nck-beta) (nck-2). [source:swissprot;acc:o43639]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
6776.85\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
7485.55\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.10458\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
elongation factor 1-delta (ef-1-delta) (antigen ny-co-4). [source:swissprot;acc:p29692]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
7869.52\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8188.67\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04056\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
848\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
retinoic acid induced 17; pias-like protein hzimp10. [source:refseq;acc:nm\_020338]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
7877.38\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8196.79\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04055\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
wd-repeat protein bing4. [source:swissprot;acc:o15213]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
4066.56\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
4491.65\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.10453\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
849\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
dna damage binding protein 1 (damage-specific dna binding protein 1) (ddb p127 subunit) (ddba) (uv-damaged dna-binding protein 1) (uv-ddb 1) (xeroderma pigmentosum group e complementing protein) (xpce) (x- associated protein 1) (xap-1). [source:swissprot;acc:q16531]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
6194.15\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
6839.37\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.10417\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
erythroid differentiation-related factor 1. [source:refseq;acc:nm\_015608]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
7927.6\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
8249.05\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.04055\vspace{3pt}}}\\\cline{1-2}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
850\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
amyloid beta precursor protein-binding protein 2; amyloid beta precursor protein (cytoplasmic tail)-binding protein 2; protein interacting with app tail 1. [source:refseq;acc:nm\_006380]\vspace{3pt}}&&&&\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
propionyl-coa carboxylase beta chain, mitochondrial precursor (ec 6.4.1.3) (pccase beta subunit) (propanoyl-coa:carbon dioxide ligase beta subunit). [source:swissprot;acc:p05166]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
6194.15\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
6839.37\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.10417\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
851\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
casein kinase ii, alpha chain (ck ii) (ec 2.7.1.37). [source:swissprot;acc:p19138]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
4307.12\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
4755.03\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.10399\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
kh domain containing, rna binding, signal transduction associated 1; gap-associated tyrosine phosphoprotein p62 (sam68). [source:refseq;acc:nm\_006559]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7597.45\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
7905.37\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04053\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
852\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
casein kinase ii, alpha' chain (ck ii) (ec 2.7.1.37). [source:swissprot;acc:p19784]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4307.12\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
4755.03\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.10399\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
pyruvate carboxylase, mitochondrial precursor (ec 6.4.1.1) (pyruvic carboxylase) (pcb). [source:swissprot;acc:p11498]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
8425.07\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8765.87\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04045\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
853\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
apoptosis antagonizing transcription factor. [source:refseq;acc:nm\_012138]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
4078.45\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
4502.32\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.10393\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
potassium voltage-gated channel subfamily kqt member 5 (potassium channel alpha subunit kvlqt5) (kqt-like 5). [source:swissprot;acc:q9nr82]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
8383.76\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8722.62\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.04042\vspace{3pt}}}\\\cline{1-2}\cline{4-5}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
854\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
peptidyl prolyl isomerase h; cyclophilin h. [source:refseq;acc:nm\_006347]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
8367\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8705.23\vspace{3pt}}&\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
uba/ubx 33.3 kda protein. [source:swissprot;acc:q04323]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcD}{\vspace{3pt}\noindent
6562.98\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcE}{\vspace{3pt}\noindent
7242.37\vspace{3pt}}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.10352\vspace{3pt}}}\\\cline{1-2}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
855\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
ero1-like. [source:refseq;acc:nm\_014584]\vspace{3pt}}&&&&\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
prp18 pre-mrna processing factor 18 homolog. [source:refseq;acc:nm\_003675]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
8367\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8705.23\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04042\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
856\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
heparin sulfate n-deacetylase/n-sulfotransferase (ec 2.8.2.-) (n- hsst) (n-heparin sulfate sulfotransferase) (glucosaminyl n- deacetylase/n-sulfotransferase). [source:swissprot;acc:p52849]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5210.58\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
5749.33\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.1034\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
potassium voltage-gated channel subfamily kqt member 2 (neuroblastoma- specific potassium channel alpha subunit kvlqt2) (kqt-like 2). [source:swissprot;acc:o43526]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
8383.63\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8722.43\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04041\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
857\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
n-deacetylase/n-sulfotransferase (heparan glucosaminyl) 3. [source:refseq;acc:nm\_004784]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5210.58\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
5749.33\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.1034\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
potassium voltage-gated channel subfamily kqt member 3 (potassium channel alpha subunit kvlqt3) (kqt-like 3). [source:swissprot;acc:o43525]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
8383.36\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8722.05\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcF}{\vspace{3pt}\noindent
1.0404\vspace{3pt}}}\\\cline{1-2}\cline{4-5}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
858\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
adp,atp carrier protein, liver isoform t2 (adp/atp translocase 3) (adenine nucleotide translocator 3) (ant 3). [source:swissprot;acc:p12236]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
8185.04\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8515.68\vspace{3pt}}&\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
n-deacetylase/n-sulfotransferase 4. [source:refseq;acc:nm\_022569]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5210.58\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
5749.33\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.1034\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
859\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial precursor (ec 3.6.1.23) (dutpase) (dutp pyrophosphatase). [source:swissprot;acc:p33316]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7921.94\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8241.9\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04039\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
heparan sulfate n-deacetylase/n-sulfotransferase (ec 2.8.2.8) (n-hsst) (hsnst) ([heparan sulfate]-glucosamine n-sulfotransferase) (n-heparan sulfate sulfotransferase) (glucosaminyl n-deacetylase/n- sulfotransferase). [source:swissprot;acc:p52848]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5210.58\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
5749.33\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.1034\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
860\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
adp,atp carrier protein, fibroblast isoform (adp/atp translocase 2) (adenine nucleotide translocator 2) (ant 2). [source:swissprot;acc:p05141]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
8183.08\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8513.53\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04038\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
protein cdc27hs (cell division cycle protein 27 homolog) (h-nuc). [source:swissprot;acc:p30260]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
5210.58\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
5749.33\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.1034\vspace{3pt}}\\\hline
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
861\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
adp,atp carrier protein, heart/skeletal muscle isoform t1 (adp/atp translocase 1) (adenine nucleotide translocator 1) (ant 1). [source:swissprot;acc:p12235]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
8182.63\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8512.98\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04037\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
bloom's syndrome protein (ec 3.6.1.-) (recq protein-like 3) (dna helicase, recq-like, type 2). [source:swissprot;acc:p54132]\vspace{3pt}}&\multirow{2}{*}{\parbox{\wcC}{\vspace{3pt}\noindent
High confidence\vspace{3pt}}}&\parbox{\wcD}{\vspace{3pt}\noindent
5734.15\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
6326.41\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.10329\vspace{3pt}}\\\cline{1-2}\cline{4-6}
\multirow{2}{*}{\parbox{\wcA}{\vspace{3pt}\noindent
862\vspace{3pt}}}&\parbox{\wcB}{\vspace{3pt}\noindent
probable ribosome biogenesis protein nep1 (c2f protein). [source:swissprot;acc:q92979]\vspace{3pt}}&&\parbox{\wcD}{\vspace{3pt}\noindent
4076.72\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
4497.74\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.10327\vspace{3pt}}\\\cline{2-6}
&\parbox{\wcB}{\vspace{3pt}\noindent
protein p25-beta. [source:swissprot;acc:p59282]\vspace{3pt}}&\parbox{\wcC}{\vspace{3pt}\noindent
Low confidence\vspace{3pt}}&\parbox{\wcD}{\vspace{3pt}\noindent
7696.72\vspace{3pt}}&\parbox{\wcE}{\vspace{3pt}\noindent
8007.12\vspace{3pt}}&\parbox{\wcF}{\vspace{3pt}\noindent
1.04033\vspace{3pt}}\\\hline
nd{longtable}

Legend:
- Rank is the rank after comparing the two networks

 - Gene is the ensembl human gene identifier measured by 1 or more probes on the microarray

 - Value Type describes how the microarray measurement was processed. Ranked indicates that we sorted all measurements and use the rank as red and green value. Measured is the normal measurement. Squared and Rooted are the square and square root respecitcely. This might be valueable to compensate for non linear light distributions.

 - Network Comparison Type describes whether we divided the red and green types or whether we sutractcted them

 - Interaction Map specifies whether we used only the hig hconfidence protein-protein interactions or also included the low confidence interactions.

 - Filtered specifies whether we only included the high confidence microarry measurements or not.
- http://analysis.yellowcouch.org/